RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKT6	YKL196C	ECM21	P38167	1117 aa	Known RBP	4.29	□□□□□ -1.72
YKT6	YKL196C	SPF1	P39986	1215 aa	Known RBP	4.29	□□□□□ -1.72
YKT6	YKL196C	MCM6	P53091	1017 aa	Known RBP	4.29	□□□□□ -1.72
YKT6	YKL196C	CWC22	P53333	577 aa	Known RBP	4.29	□□□□□ -1.72
YKT6	YKL196C	SHE9	Q04172	456 aa		4.29	□□□□□ -1.72
YKT6	YKL196C	YDR306C	Q06640	478 aa		4.29	□□□□□ -1.72
YKT6	YKL196C	RLP24	Q07915	199 aa	Known RBP	4.29	□□□□□ -1.72
YKT6	YKL196C	YLL058W	Q12198	575 aa		4.29	□□□□□ -1.72
YKT6	YKL196C	HSP82	P02829	709 aa	Known RBP	4.28	□□□□□ -1.72
YKT6	YKL196C	FUN30	P31380	1131 aa		4.28	□□□□□ -1.72
YKT6	YKL196C	POA1	P38218	177 aa		4.28	□□□□□ -1.72
YKT6	YKL196C	PLB1	P39105	664 aa		4.28	□□□□□ -1.72
YKT6	YKL196C	SNF7	P39929	240 aa	Known RBP	4.28	□□□□□ -1.72
YKT6	YKL196C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
YKT6	YKL196C	TDA5	Q06417	326 aa	Known RBP	4.28	□□□□□ -1.72
YKT6	YKL196C	PLP2	Q12017	286 aa		4.28	□□□□□ -1.72
YKT6	YKL196C	NPP1	P25353	742 aa		4.27	□□□□□ -1.73
YKT6	YKL196C	ERT1	P38140	529 aa		4.27	□□□□□ -1.73
YKT6	YKL196C	MET12	P46151	657 aa		4.27	□□□□□ -1.73
YKT6	YKL196C	YGR012W	P53206	393 aa		4.27	□□□□□ -1.73
YKT6	YKL196C	MDG1	P53885	366 aa		4.27	□□□□□ -1.73
YKT6	YKL196C	SRP1	Q02821	542 aa	Known RBP	4.27	□□□□□ -1.73
YKT6	YKL196C	AFR1	P33304	620 aa		4.26	□□□□□ -1.73
YKT6	YKL196C	MRP8	P35719	219 aa		4.26	□□□□□ -1.73
YKT6	YKL196C	YBR184W	P38299	523 aa		4.26	□□□□□ -1.73
YKT6	YKL196C	MNN10	P50108	393 aa	Known RBP	4.26	□□□□□ -1.73
YKT6	YKL196C	PHO23	P50947	330 aa		4.26	□□□□□ -1.73
YKT6	YKL196C	WHI4	Q07655	649 aa	Known RBP	4.26	□□□□□ -1.73
YKT6	YKL196C	NOP12	Q08208	459 aa	Known RBP	4.26	□□□□□ -1.73
YKT6	YKL196C	HIS5	P07172	385 aa		4.25	□□□□□ -1.73
YKT6	YKL196C	SPE1	P08432	466 aa		4.25	□□□□□ -1.73
YKT6	YKL196C	PPH3	P32345	308 aa		4.25	□□□□□ -1.73
YKT6	YKL196C	TSL1	P38427	1098 aa	Known RBP	4.25	□□□□□ -1.73
YKT6	YKL196C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
YKT6	YKL196C	GYP7	P48365	746 aa		4.25	□□□□□ -1.73
YKT6	YKL196C	HSF1	P10961	833 aa		4.24	□□□□□ -1.73
YKT6	YKL196C	RNA1	P11745	407 aa	Known RBP	4.24	□□□□□ -1.73
YKT6	YKL196C	STE11	P23561	717 aa		4.24	□□□□□ -1.73
YKT6	YKL196C	HCM1	P25364	564 aa		4.24	□□□□□ -1.73
YKT6	YKL196C	GRX1	P25373	110 aa	Known RBP	4.24	□□□□□ -1.73
YKT6	YKL196C	AAR2	P32357	355 aa	Predicted RBP	4.24	□□□□□ -1.73
YKT6	YKL196C	PBY1	P38254	753 aa		4.24	□□□□□ -1.73
YKT6	YKL196C	NUG1	P40010	520 aa	Known RBP	4.24	□□□□□ -1.73
YKT6	YKL196C	YER158C	P40095	573 aa		4.24	□□□□□ -1.73
YKT6	YKL196C	IRR1	P40541	1150 aa		4.24	□□□□□ -1.73
YKT6	YKL196C	CHA4	P43634	648 aa		4.24	□□□□□ -1.73
YKT6	YKL196C	PFD1	P46988	109 aa		4.24	□□□□□ -1.73
YKT6	YKL196C	YPR196W	Q06595	470 aa		4.24	□□□□□ -1.73
YKT6	YKL196C	SSF2	Q12153	453 aa	Predicted RBP	4.24	□□□□□ -1.73
YKT6	YKL196C	HIF1	Q12373	385 aa		4.24	□□□□□ -1.73
YKT6	YKL196C	TUB2	P02557	457 aa	Known RBP	4.23	□□□□□ -1.73
YKT6	YKL196C	HBS1	P32769	611 aa	Known RBP	4.23	□□□□□ -1.73
YKT6	YKL196C	YRO2	P38079	344 aa		4.23	□□□□□ -1.73
YKT6	YKL196C	KCS1	Q12494	1050 aa		4.23	□□□□□ -1.73
YKT6	YKL196C	CCC2	P38995	1004 aa		4.22	□□□□□ -1.73
YKT6	YKL196C	OSW7	P43611	510 aa		4.22	□□□□□ -1.73
YKT6	YKL196C	FMP25	Q08023	583 aa		4.22	□□□□□ -1.73
YKT6	YKL196C	NTO1	Q12311	748 aa		4.22	□□□□□ -1.73
YKT6	YKL196C	PMA1	P05030	918 aa	Known RBP	4.21	□□□□□ -1.74
YKT6	YKL196C	TRM2	P33753	639 aa		4.21	□□□□□ -1.74
YKT6	YKL196C	YBR284W	P38150	797 aa		4.21	□□□□□ -1.74
YKT6	YKL196C	FUN12	P39730	1002 aa	Known RBP	4.21	□□□□□ -1.74
YKT6	YKL196C	ALR2	P43553	858 aa		4.21	□□□□□ -1.74
YKT6	YKL196C	SUN4	P53616	420 aa		4.21	□□□□□ -1.74
YKT6	YKL196C	UBX5	Q06682	500 aa		4.21	□□□□□ -1.74
YKT6	YKL196C	WRS1	Q12109	432 aa	Known RBP	4.21	□□□□□ -1.74
YKT6	YKL196C	NPC2	Q12408	173 aa		4.21	□□□□□ -1.74
YKT6	YKL196C	QCR6	P00127	147 aa		4.2	□□□□□ -1.74
YKT6	YKL196C	NOT3	P06102	836 aa	Known RBP	4.2	□□□□□ -1.74
YKT6	YKL196C	CDC48	P25694	835 aa	Known RBP	4.2	□□□□□ -1.74
YKT6	YKL196C	DCG1	P32460	244 aa		4.2	□□□□□ -1.74
YKT6	YKL196C	SWE1	P32944	819 aa		4.2	□□□□□ -1.74
YKT6	YKL196C	YKR078W	P36158	585 aa	Known RBP	4.2	□□□□□ -1.74
YKT6	YKL196C	RIX1	P38883	763 aa	Predicted RBP	4.2	□□□□□ -1.74
YKT6	YKL196C	PSP2	P50109	593 aa	Known RBP	4.2	□□□□□ -1.74
YKT6	YKL196C	YKE2	P52553	114 aa		4.2	□□□□□ -1.74
YKT6	YKL196C	EXG2	P52911	562 aa		4.2	□□□□□ -1.74
YKT6	YKL196C	RAI1	P53063	387 aa	Known RBP	4.2	□□□□□ -1.74
YKT6	YKL196C	NCS6	P53088	359 aa		4.2	□□□□□ -1.74
YKT6	YKL196C	BUL2	Q03758	920 aa	Known RBP	4.2	□□□□□ -1.74
YKT6	YKL196C	SSL1	Q04673	461 aa	Predicted RBP	4.2	□□□□□ -1.74
YKT6	YKL196C	LAS17	Q12446	633 aa		4.2	□□□□□ -1.74
YKT6	YKL196C	ADE8	P04161	214 aa		4.19	□□□□□ -1.74
YKT6	YKL196C	RPL8B	P29453	256 aa	Known RBP	4.19	□□□□□ -1.74
YKT6	YKL196C	TOK1	P40310	691 aa		4.19	□□□□□ -1.74
YKT6	YKL196C	URM1	P40554	99 aa	Predicted RBP	4.19	□□□□□ -1.74
YKT6	YKL196C	NOP7	P53261	605 aa	Known RBP	4.19	□□□□□ -1.74
YKT6	YKL196C	PUS9	Q12069	462 aa		4.19	□□□□□ -1.74
YKT6	YKL196C	YPR071W	Q12346	211 aa		4.19	□□□□□ -1.74
YKT6	YKL196C	RAD4	P14736	754 aa		4.18	□□□□□ -1.74
YKT6	YKL196C	HSC82	P15108	705 aa	Known RBP	4.18	□□□□□ -1.74
YKT6	YKL196C	PRP9	P19736	530 aa	Known RBP	4.18	□□□□□ -1.74
YKT6	YKL196C	RPC82	P32349	654 aa		4.18	□□□□□ -1.74
YKT6	YKL196C	RPD3	P32561	433 aa		4.18	□□□□□ -1.74
YKT6	YKL196C	YBR238C	P38330	731 aa	Known RBP	4.18	□□□□□ -1.74
YKT6	YKL196C	ENP1	P38333	483 aa	Known RBP	4.18	□□□□□ -1.74
YKT6	YKL196C	SIT1	P39980	628 aa		4.18	□□□□□ -1.74
YKT6	YKL196C	SLI1	P53304	468 aa		4.18	□□□□□ -1.74
YKT6	YKL196C	KIN4	Q01919	800 aa		4.18	□□□□□ -1.74
YKT6	YKL196C	NAN1	Q02931	896 aa	Known RBP	4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms