RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeast

Gene SWD2, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWD2	YKL018W	LST4	P34239	828 aa		5.1	□□□□□ -1.59
SWD2	YKL018W	YPT53	P36019	220 aa		5.1	□□□□□ -1.59
SWD2	YKL018W	YKL069W	P36088	180 aa		5.1	□□□□□ -1.59
SWD2	YKL018W	ECM21	P38167	1117 aa	Known RBP	5.1	□□□□□ -1.59
SWD2	YKL018W	MET12	P46151	657 aa		5.1	□□□□□ -1.59
SWD2	YKL018W	GSF2	Q04697	403 aa	Known RBP	5.1	□□□□□ -1.59
SWD2	YKL018W	TDA5	Q06417	326 aa	Known RBP	5.1	□□□□□ -1.59
SWD2	YKL018W	ADE8	P04161	214 aa		5.09	□□□□□ -1.59
SWD2	YKL018W	HCM1	P25364	564 aa		5.09	□□□□□ -1.59
SWD2	YKL018W	GIC1	P38785	314 aa		5.09	□□□□□ -1.59
SWD2	YKL018W	URN1	Q06525	465 aa	Known RBP	5.09	□□□□□ -1.59
SWD2	YKL018W	HIS5	P07172	385 aa		5.08	□□□□□ -1.6
SWD2	YKL018W	CDC12	P32468	407 aa	Known RBP	5.08	□□□□□ -1.6
SWD2	YKL018W	TRM2	P33753	639 aa		5.08	□□□□□ -1.6
SWD2	YKL018W	PBY1	P38254	753 aa		5.08	□□□□□ -1.6
SWD2	YKL018W	PLB1	P39105	664 aa		5.08	□□□□□ -1.6
SWD2	YKL018W	SPE1	P08432	466 aa		5.07	□□□□□ -1.6
SWD2	YKL018W	YER158C	P40095	573 aa		5.07	□□□□□ -1.6
SWD2	YKL018W	IRR1	P40541	1150 aa		5.07	□□□□□ -1.6
SWD2	YKL018W	IOC3	P43596	787 aa		5.07	□□□□□ -1.6
SWD2	YKL018W	SFB2	P53953	876 aa		5.07	□□□□□ -1.6
SWD2	YKL018W	CDA1	Q06702	301 aa		5.07	□□□□□ -1.6
SWD2	YKL018W	ADY3	Q07732	790 aa		5.07	□□□□□ -1.6
SWD2	YKL018W	PRP9	P19736	530 aa	Known RBP	5.06	□□□□□ -1.6
SWD2	YKL018W	RPC82	P32349	654 aa		5.06	□□□□□ -1.6
SWD2	YKL018W	SCT1	P32784	759 aa		5.06	□□□□□ -1.6
SWD2	YKL018W	ATG19	P35193	415 aa		5.06	□□□□□ -1.6
SWD2	YKL018W	YRO2	P38079	344 aa		5.06	□□□□□ -1.6
SWD2	YKL018W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
SWD2	YKL018W	SPF1	P39986	1215 aa	Known RBP	5.05	□□□□□ -1.6
SWD2	YKL018W	GYP7	P48365	746 aa		5.05	□□□□□ -1.6
SWD2	YKL018W	CDC48	P25694	835 aa	Known RBP	5.04	□□□□□ -1.6
SWD2	YKL018W	YBR184W	P38299	523 aa		5.04	□□□□□ -1.6
SWD2	YKL018W	VPS30	Q02948	557 aa		5.04	□□□□□ -1.6
SWD2	YKL018W	PNS1	Q12412	539 aa		5.04	□□□□□ -1.6
SWD2	YKL018W	YKR078W	P36158	585 aa	Known RBP	5.03	□□□□□ -1.6
SWD2	YKL018W	CHA4	P43634	648 aa		5.03	□□□□□ -1.6
SWD2	YKL018W	PHO23	P50947	330 aa		5.03	□□□□□ -1.6
SWD2	YKL018W	SPO75	Q07798	868 aa		5.03	□□□□□ -1.6
SWD2	YKL018W	GRX1	P25373	110 aa	Known RBP	5.02	□□□□□ -1.61
SWD2	YKL018W	CDC11	P32458	415 aa		5.02	□□□□□ -1.61
SWD2	YKL018W	NPP2	P39997	493 aa		5.02	□□□□□ -1.61
SWD2	YKL018W	RAI1	P53063	387 aa	Known RBP	5.02	□□□□□ -1.61
SWD2	YKL018W	NTO1	Q12311	748 aa		5.02	□□□□□ -1.61
SWD2	YKL018W	NOT3	P06102	836 aa	Known RBP	5.01	□□□□□ -1.61
SWD2	YKL018W	PFK1	P16861	987 aa	Known RBP	5.01	□□□□□ -1.61
SWD2	YKL018W	RFA1	P22336	621 aa	Known RBP	5.01	□□□□□ -1.61
SWD2	YKL018W	CAD1	P24813	409 aa	Known RBP	5.01	□□□□□ -1.61
SWD2	YKL018W	PMI40	P29952	429 aa	Known RBP	5.01	□□□□□ -1.61
SWD2	YKL018W	DCG1	P32460	244 aa		5.01	□□□□□ -1.61
SWD2	YKL018W	TSL1	P38427	1098 aa	Known RBP	5.01	□□□□□ -1.61
SWD2	YKL018W	ALR2	P43553	858 aa		5.01	□□□□□ -1.61
SWD2	YKL018W	MSE1	P48525	536 aa		5.01	□□□□□ -1.61
SWD2	YKL018W	NAN1	Q02931	896 aa	Known RBP	5.01	□□□□□ -1.61
SWD2	YKL018W	AIM39	Q08223	395 aa		5.01	□□□□□ -1.61
SWD2	YKL018W	NPC2	Q12408	173 aa		5.01	□□□□□ -1.61
SWD2	YKL018W	SED4	P25365	1065 aa		5	□□□□□ -1.61
SWD2	YKL018W	STE5	P32917	917 aa		5	□□□□□ -1.61
SWD2	YKL018W	AIM21	P40563	679 aa		5	□□□□□ -1.61
SWD2	YKL018W	CCM1	P48237	864 aa	Predicted RBP	5	□□□□□ -1.61
SWD2	YKL018W	EAF1	Q06337	982 aa		5	□□□□□ -1.61
SWD2	YKL018W	WHI4	Q07655	649 aa	Known RBP	5	□□□□□ -1.61
SWD2	YKL018W	PUS9	Q12069	462 aa		5	□□□□□ -1.61
SWD2	YKL018W	OSH2	Q12451	1283 aa		5	□□□□□ -1.61
SWD2	YKL018W	KCS1	Q12494	1050 aa		5	□□□□□ -1.61
SWD2	YKL018W	PMA1	P05030	918 aa	Known RBP	4.99	□□□□□ -1.61
SWD2	YKL018W	LCD1	Q04377	747 aa		4.99	□□□□□ -1.61
SWD2	YKL018W	SSF2	Q12153	453 aa	Predicted RBP	4.99	□□□□□ -1.61
SWD2	YKL018W	YTA7	P40340	1379 aa		4.99	□□□□□ -1.61
SWD2	YKL018W	NPP1	P25353	742 aa		4.98	□□□□□ -1.61
SWD2	YKL018W	ARE1	P25628	610 aa		4.98	□□□□□ -1.61
SWD2	YKL018W	YBR284W	P38150	797 aa		4.98	□□□□□ -1.61
SWD2	YKL018W	SIT1	P39980	628 aa		4.98	□□□□□ -1.61
SWD2	YKL018W	URM1	P40554	99 aa	Predicted RBP	4.98	□□□□□ -1.61
SWD2	YKL018W	ERP6	P53198	216 aa		4.98	□□□□□ -1.61
SWD2	YKL018W	SUN4	P53616	420 aa		4.98	□□□□□ -1.61
SWD2	YKL018W	REC104	P33323	182 aa		4.97	□□□□□ -1.61
SWD2	YKL018W	CEP3	P40969	608 aa		4.97	□□□□□ -1.61
SWD2	YKL018W	EXG2	P52911	562 aa		4.97	□□□□□ -1.61
SWD2	YKL018W	NCS6	P53088	359 aa		4.97	□□□□□ -1.61
SWD2	YKL018W	FMP25	Q08023	583 aa		4.97	□□□□□ -1.61
SWD2	YKL018W	YPR071W	Q12346	211 aa		4.97	□□□□□ -1.61
SWD2	YKL018W	STE13	P33894	931 aa		4.96	□□□□□ -1.62
SWD2	YKL018W	PFD1	P46988	109 aa		4.96	□□□□□ -1.62
SWD2	YKL018W	NNF1	P47149	201 aa		4.96	□□□□□ -1.62
SWD2	YKL018W	UBX5	Q06682	500 aa		4.96	□□□□□ -1.62
SWD2	YKL018W	RPS9A	O13516	197 aa	Known RBP	4.95	□□□□□ -1.62
SWD2	YKL018W	RAD4	P14736	754 aa		4.95	□□□□□ -1.62
SWD2	YKL018W	HRR25	P29295	494 aa	Known RBP	4.95	□□□□□ -1.62
SWD2	YKL018W	RPL8B	P29453	256 aa	Known RBP	4.95	□□□□□ -1.62
SWD2	YKL018W	HBS1	P32769	611 aa	Known RBP	4.95	□□□□□ -1.62
SWD2	YKL018W	DEF1	P35732	738 aa	Known RBP	4.95	□□□□□ -1.62
SWD2	YKL018W	YIL108W	P40483	696 aa	Known RBP	4.95	□□□□□ -1.62
SWD2	YKL018W	UTP8	P53276	713 aa	Known RBP	4.95	□□□□□ -1.62
SWD2	YKL018W	ENB1	Q08299	606 aa		4.95	□□□□□ -1.62
SWD2	YKL018W	HSP60	P19882	572 aa	Known RBP	4.94	□□□□□ -1.62
SWD2	YKL018W	KAR4	P25583	335 aa		4.94	□□□□□ -1.62
SWD2	YKL018W	TYE7	P33122	291 aa	Predicted RBP	4.94	□□□□□ -1.62
SWD2	YKL018W	AFR1	P33304	620 aa		4.94	□□□□□ -1.62
SWD2	YKL018W	YBR238C	P38330	731 aa	Known RBP	4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms