RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C KTR4P38131 464 aa2.73□□□□□ -1.97
VPS55YJR044C NPP2P39997 493 aa2.73□□□□□ -1.97
VPS55YJR044C URM1P40554 99 aaPredicted RBP2.73□□□□□ -1.97
VPS55YJR044C TRP2P00899 507 aaKnown RBP2.72□□□□□ -1.97
VPS55YJR044C SEC20P28791 383 aa2.72□□□□□ -1.97
VPS55YJR044C FYV10P40492 516 aa2.72□□□□□ -1.97
VPS55YJR044C SFB2P53953 876 aa2.72□□□□□ -1.97
VPS55YJR044C SRT1Q03175 343 aa2.72□□□□□ -1.97
VPS55YJR044C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
VPS55YJR044C RTT10Q08924 1013 aa2.72□□□□□ -1.97
VPS55YJR044C ALG7P07286 448 aa2.71□□□□□ -1.98
VPS55YJR044C LYP1P32487 611 aa2.71□□□□□ -1.98
VPS55YJR044C YER158CP40095 573 aa2.71□□□□□ -1.98
VPS55YJR044C YGL176CP46945 554 aa2.71□□□□□ -1.98
VPS55YJR044C RNT1Q02555 471 aa2.71□□□□□ -1.98
VPS55YJR044C UPC2Q12151 913 aa2.71□□□□□ -1.98
VPS55YJR044C PPR1P07272 904 aaPredicted RBP2.7□□□□□ -1.98
VPS55YJR044C TRP4P07285 380 aaPredicted RBP2.7□□□□□ -1.98
VPS55YJR044C MDM10P18409 493 aa2.7□□□□□ -1.98
VPS55YJR044C FUN30P31380 1131 aa2.7□□□□□ -1.98
VPS55YJR044C TIM44Q01852 431 aa2.7□□□□□ -1.98
VPS55YJR044C SLU7Q02775 382 aaKnown RBP2.7□□□□□ -1.98
VPS55YJR044C GUP2Q08929 609 aa2.7□□□□□ -1.98
VPS55YJR044C ATE1P16639 503 aa2.69□□□□□ -1.98
VPS55YJR044C DUT1P33317 147 aa2.69□□□□□ -1.98
VPS55YJR044C SAH1P39954 449 aaKnown RBP2.69□□□□□ -1.98
VPS55YJR044C EEB1Q02891 456 aa2.69□□□□□ -1.98
VPS55YJR044C SUT2Q12286 268 aa2.69□□□□□ -1.98
VPS55YJR044C BNR1P40450 1375 aa2.69□□□□□ -1.98
VPS55YJR044C STE14P32584 239 aa2.68□□□□□ -1.98
VPS55YJR044C YKL107WP34251 309 aa2.68□□□□□ -1.98
VPS55YJR044C ATG19P35193 415 aa2.68□□□□□ -1.98
VPS55YJR044C SDS3P40505 327 aa2.68□□□□□ -1.98
VPS55YJR044C ERG5P54781 538 aa2.68□□□□□ -1.98
VPS55YJR044C SEN54Q02825 467 aaPredicted RBP2.68□□□□□ -1.98
VPS55YJR044C YLR225CQ05948 407 aaKnown RBP2.68□□□□□ -1.98
VPS55YJR044C ESC2Q06340 456 aa2.68□□□□□ -1.98
VPS55YJR044C YLL058WQ12198 575 aa2.68□□□□□ -1.98
VPS55YJR044C SED4P25365 1065 aa2.67□□□□□ -1.98
VPS55YJR044C PPS1P38148 807 aa2.67□□□□□ -1.98
VPS55YJR044C MGE1P38523 228 aa2.67□□□□□ -1.98
VPS55YJR044C POL32P47110 350 aa2.67□□□□□ -1.98
VPS55YJR044C TYW3P53177 273 aa2.67□□□□□ -1.98
VPS55YJR044C ESF1Q06344 628 aaKnown RBP2.67□□□□□ -1.98
VPS55YJR044C TMA46Q12000 345 aaKnown RBP2.67□□□□□ -1.98
VPS55YJR044C MRH1Q12117 320 aaPredicted RBP2.67□□□□□ -1.98
VPS55YJR044C NDJ1Q12366 352 aa2.67□□□□□ -1.98
VPS55YJR044C RKM4Q12504 494 aa2.67□□□□□ -1.98
VPS55YJR044C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
VPS55YJR044C PPZ2P33329 710 aa2.65□□□□□ -1.99
VPS55YJR044C TDP1P38319 544 aa2.65□□□□□ -1.99
VPS55YJR044C YJR107WP47145 328 aa2.65□□□□□ -1.99
VPS55YJR044C YPR196WQ06595 470 aa2.65□□□□□ -1.99
VPS55YJR044C HBT1Q07653 1046 aaKnown RBP2.65□□□□□ -1.99
VPS55YJR044C AFT2Q08957 416 aa2.65□□□□□ -1.99
VPS55YJR044C SEC21P32074 935 aaKnown RBP2.64□□□□□ -1.99
VPS55YJR044C RAI1P53063 387 aaKnown RBP2.64□□□□□ -1.99
VPS55YJR044C SSL1Q04673 461 aaPredicted RBP2.64□□□□□ -1.99
VPS55YJR044C FRE5Q08908 694 aa2.64□□□□□ -1.99
VPS55YJR044C CDC12P32468 407 aaKnown RBP2.63□□□□□ -1.99
VPS55YJR044C FLO10P36170 1169 aa2.63□□□□□ -1.99
VPS55YJR044C RIX1P38883 763 aaPredicted RBP2.63□□□□□ -1.99
VPS55YJR044C PEX19Q07418 342 aa2.63□□□□□ -1.99
VPS55YJR044C YAP7Q08182 245 aa2.63□□□□□ -1.99
VPS55YJR044C NOT3P06102 836 aaKnown RBP2.62□□□□□ -1.99
VPS55YJR044C CDC34P14682 295 aa2.62□□□□□ -1.99
VPS55YJR044C ABD1P32783 436 aaPredicted RBP2.62□□□□□ -1.99
VPS55YJR044C MBP1P39678 833 aa2.62□□□□□ -1.99
VPS55YJR044C ELO3P40319 345 aa2.62□□□□□ -1.99
VPS55YJR044C IMO32P53219 342 aa2.62□□□□□ -1.99
VPS55YJR044C RPD3P32561 433 aa2.61□□□□□ -1.99
VPS55YJR044C CTF13P35203 478 aa2.61□□□□□ -1.99
VPS55YJR044C YHL017WP38745 532 aa2.61□□□□□ -1.99
VPS55YJR044C SPO20Q04359 397 aa2.61□□□□□ -1.99
VPS55YJR044C DUS3Q06053 668 aaKnown RBP2.61□□□□□ -1.99
VPS55YJR044C RRP15Q06511 250 aaPredicted RBP2.61□□□□□ -1.99
VPS55YJR044C PET112P33893 541 aa2.6□□□□□ -1.99
VPS55YJR044C TSL1P38427 1098 aaKnown RBP2.6□□□□□ -1.99
VPS55YJR044C FKH2P41813 862 aa2.6□□□□□ -1.99
VPS55YJR044C TAH11P47112 604 aa2.6□□□□□ -1.99
VPS55YJR044C GYP7P48365 746 aa2.6□□□□□ -1.99
VPS55YJR044C MRPS35P53292 345 aa2.6□□□□□ -1.99
VPS55YJR044C THI7Q05998 598 aa2.6□□□□□ -1.99
VPS55YJR044C MET6P05694 767 aaKnown RBP2.59□□□□□ -1.99
VPS55YJR044C MET3P08536 511 aa2.59□□□□□ -1.99
VPS55YJR044C TUB1P09733 447 aaKnown RBP2.59□□□□□ -1.99
VPS55YJR044C TUB3P09734 445 aaKnown RBP2.59□□□□□ -1.99
VPS55YJR044C GFA1P14742 717 aaKnown RBP2.59□□□□□ -1.99
VPS55YJR044C RPC82P32349 654 aa2.59□□□□□ -1.99
VPS55YJR044C SLD2P34252 453 aa2.59□□□□□ -1.99
VPS55YJR044C PCL5P38794 229 aa2.59□□□□□ -1.99
VPS55YJR044C DAS1P47005 663 aa2.59□□□□□ -1.99
VPS55YJR044C VPS73P53142 486 aaKnown RBP2.59□□□□□ -1.99
VPS55YJR044C SRP1Q02821 542 aaKnown RBP2.59□□□□□ -1.99
VPS55YJR044C DLT1Q04216 342 aa2.59□□□□□ -1.99
VPS55YJR044C HOF1Q05080 669 aa2.59□□□□□ -1.99
VPS55YJR044C ADY4Q05955 493 aa2.59□□□□□ -1.99
VPS55YJR044C ICT1Q12385 394 aa2.59□□□□□ -1.99
VPS55YJR044C CAF20P12962 161 aaKnown RBP2.58□□□□□ -2
VPS55YJR044C NPP1P25353 742 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms