RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C NCS6P53088 359 aa5.9□□□□□ -1.46
CTK2YJL006C SAH1P39954 449 aaKnown RBP5.89□□□□□ -1.47
CTK2YJL006C URM1P40554 99 aaPredicted RBP5.89□□□□□ -1.47
CTK2YJL006C UBA2P52488 636 aa5.89□□□□□ -1.47
CTK2YJL006C WHI4Q07655 649 aaKnown RBP5.89□□□□□ -1.47
CTK2YJL006C KAR4P25583 335 aa5.88□□□□□ -1.47
CTK2YJL006C EFT1P32324 842 aaKnown RBP5.88□□□□□ -1.47
CTK2YJL006C ATG19P35193 415 aa5.88□□□□□ -1.47
CTK2YJL006C SNF7P39929 240 aaKnown RBP5.88□□□□□ -1.47
CTK2YJL006C YML020WQ03722 664 aa5.88□□□□□ -1.47
CTK2YJL006C ASF1P32447 279 aa5.87□□□□□ -1.47
CTK2YJL006C PIN4P34217 668 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
CTK2YJL006C ESC2Q06340 456 aa5.87□□□□□ -1.47
CTK2YJL006C CAD1P24813 409 aaKnown RBP5.86□□□□□ -1.47
CTK2YJL006C MNR2P35724 969 aa5.86□□□□□ -1.47
CTK2YJL006C NPP2P39997 493 aa5.86□□□□□ -1.47
CTK2YJL006C YLR040CQ07988 224 aa5.86□□□□□ -1.47
CTK2YJL006C SUL1P38359 859 aa5.85□□□□□ -1.47
CTK2YJL006C SFB2P53953 876 aa5.85□□□□□ -1.47
CTK2YJL006C YOL073CQ08232 322 aa5.85□□□□□ -1.47
CTK2YJL006C GUP2Q08929 609 aa5.85□□□□□ -1.47
CTK2YJL006C BUL1P48524 976 aa5.84□□□□□ -1.47
CTK2YJL006C YGR053CP53234 283 aa5.84□□□□□ -1.47
CTK2YJL006C ABD1P32783 436 aaPredicted RBP5.83□□□□□ -1.48
CTK2YJL006C SRP1Q02821 542 aaKnown RBP5.83□□□□□ -1.48
CTK2YJL006C CDC12P32468 407 aaKnown RBP5.82□□□□□ -1.48
CTK2YJL006C KTR4P38131 464 aa5.82□□□□□ -1.48
CTK2YJL006C NOP8Q08287 484 aaPredicted RBP5.82□□□□□ -1.48
CTK2YJL006C UPC2Q12151 913 aa5.82□□□□□ -1.48
CTK2YJL006C RPC82P32349 654 aa5.81□□□□□ -1.48
CTK2YJL006C MBP1P39678 833 aa5.81□□□□□ -1.48
CTK2YJL006C FAA4P47912 694 aaKnown RBP5.81□□□□□ -1.48
CTK2YJL006C ERG4P25340 473 aa5.8□□□□□ -1.48
CTK2YJL006C YPR196WQ06595 470 aa5.8□□□□□ -1.48
CTK2YJL006C STB4P50104 949 aa5.79□□□□□ -1.48
CTK2YJL006C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
CTK2YJL006C GDE1Q02979 1223 aa5.79□□□□□ -1.48
CTK2YJL006C DUS3Q06053 668 aaKnown RBP5.79□□□□□ -1.48
CTK2YJL006C SED4P25365 1065 aa5.78□□□□□ -1.48
CTK2YJL006C GYP7P48365 746 aa5.78□□□□□ -1.48
CTK2YJL006C YMR206WQ03695 313 aa5.78□□□□□ -1.48
CTK2YJL006C TMN2Q04562 672 aa5.78□□□□□ -1.48
CTK2YJL006C MCH5Q08777 521 aa5.78□□□□□ -1.48
CTK2YJL006C TRP4P07285 380 aaPredicted RBP5.77□□□□□ -1.49
CTK2YJL006C KRI1P42846 591 aaKnown RBP5.77□□□□□ -1.49
CTK2YJL006C RAI1P53063 387 aaKnown RBP5.77□□□□□ -1.49
CTK2YJL006C STE14P32584 239 aa5.76□□□□□ -1.49
CTK2YJL006C YER158CP40095 573 aa5.76□□□□□ -1.49
CTK2YJL006C STU2P46675 888 aa5.76□□□□□ -1.49
CTK2YJL006C SBA1P28707 216 aaKnown RBP5.75□□□□□ -1.49
CTK2YJL006C RNT1Q02555 471 aa5.75□□□□□ -1.49
CTK2YJL006C OMS1Q06668 471 aa5.75□□□□□ -1.49
CTK2YJL006C FAL1Q12099 399 aaKnown RBP5.75□□□□□ -1.49
CTK2YJL006C ACF2Q12168 779 aa5.75□□□□□ -1.49
CTK2YJL006C AGP1P25376 633 aa5.74□□□□□ -1.49
CTK2YJL006C YKR078WP36158 585 aaKnown RBP5.73□□□□□ -1.49
CTK2YJL006C TSL1P38427 1098 aaKnown RBP5.73□□□□□ -1.49
CTK2YJL006C QRI1P43123 477 aaKnown RBP5.73□□□□□ -1.49
CTK2YJL006C SLU7Q02775 382 aaKnown RBP5.73□□□□□ -1.49
CTK2YJL006C NOT3P06102 836 aaKnown RBP5.72□□□□□ -1.49
CTK2YJL006C GUS1P46655 708 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
CTK2YJL006C TIM44Q01852 431 aa5.72□□□□□ -1.49
CTK2YJL006C TRM13Q12383 476 aa5.72□□□□□ -1.49
CTK2YJL006C ALG7P07286 448 aa5.71□□□□□ -1.5
CTK2YJL006C CDC48P25694 835 aaKnown RBP5.71□□□□□ -1.5
CTK2YJL006C VBA5P36172 582 aa5.71□□□□□ -1.5
CTK2YJL006C CWC24P53769 259 aa5.71□□□□□ -1.5
CTK2YJL006C MUK1Q02866 612 aa5.71□□□□□ -1.5
CTK2YJL006C SSL1Q04673 461 aaPredicted RBP5.71□□□□□ -1.5
CTK2YJL006C YDR306CQ06640 478 aa5.71□□□□□ -1.5
CTK2YJL006C IRC10Q08118 586 aa5.71□□□□□ -1.5
CTK2YJL006C PPR1P07272 904 aaPredicted RBP5.7□□□□□ -1.5
CTK2YJL006C PPH3P32345 308 aa5.7□□□□□ -1.5
CTK2YJL006C ERG5P54781 538 aa5.7□□□□□ -1.5
CTK2YJL006C NPP1P25353 742 aa5.69□□□□□ -1.5
CTK2YJL006C ATF1P40353 525 aa5.69□□□□□ -1.5
CTK2YJL006C YKE2P52553 114 aa5.69□□□□□ -1.5
CTK2YJL006C PEX19Q07418 342 aa5.69□□□□□ -1.5
CTK2YJL006C CLN2P20438 545 aa5.68□□□□□ -1.5
CTK2YJL006C STE13P33894 931 aa5.68□□□□□ -1.5
CTK2YJL006C ADE8P04161 214 aa5.67□□□□□ -1.5
CTK2YJL006C SEC21P32074 935 aaKnown RBP5.67□□□□□ -1.5
CTK2YJL006C YBR238CP38330 731 aaKnown RBP5.67□□□□□ -1.5
CTK2YJL006C GND2P53319 492 aa5.67□□□□□ -1.5
CTK2YJL006C SHE9Q04172 456 aa5.67□□□□□ -1.5
CTK2YJL006C AAR2P32357 355 aaPredicted RBP5.66□□□□□ -1.5
CTK2YJL006C RPD3P32561 433 aa5.66□□□□□ -1.5
CTK2YJL006C MTH1P35198 433 aa5.66□□□□□ -1.5
CTK2YJL006C MAD1P40957 749 aa5.66□□□□□ -1.5
CTK2YJL006C LGE1Q02796 332 aaKnown RBP5.66□□□□□ -1.5
CTK2YJL006C VPS30Q02948 557 aa5.66□□□□□ -1.5
CTK2YJL006C OPI10Q08202 246 aa5.66□□□□□ -1.5
CTK2YJL006C FBP1P09201 348 aa5.65□□□□□ -1.5
CTK2YJL006C AFR1P33304 620 aa5.65□□□□□ -1.5
CTK2YJL006C SPC42P36094 363 aa5.65□□□□□ -1.5
CTK2YJL006C YRO2P38079 344 aa5.65□□□□□ -1.5
CTK2YJL006C SDP1P40479 209 aa5.65□□□□□ -1.5
CTK2YJL006C BDF2Q07442 638 aa5.65□□□□□ -1.5
CTK2YJL006C PRI2P20457 528 aa5.64□□□□□ -1.51
CTK2YJL006C YKL069WP36088 180 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms