RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W STE11P23561 717 aa3.22□□□□□ -1.89
RPL40AYIL148W RPL8BP29453 256 aaKnown RBP3.22□□□□□ -1.89
RPL40AYIL148W CCC2P38995 1004 aa3.22□□□□□ -1.89
RPL40AYIL148W MBP1P39678 833 aa3.22□□□□□ -1.89
RPL40AYIL148W RSP5P39940 809 aaKnown RBP3.22□□□□□ -1.89
RPL40AYIL148W MPH1P40562 993 aa3.22□□□□□ -1.89
RPL40AYIL148W TNA1P53322 534 aa3.22□□□□□ -1.89
RPL40AYIL148W HOS3Q02959 697 aaKnown RBP3.22□□□□□ -1.89
RPL40AYIL148W POB3Q04636 552 aaKnown RBP3.22□□□□□ -1.89
RPL40AYIL148W YDR306CQ06640 478 aa3.22□□□□□ -1.89
RPL40AYIL148W RXT3Q07458 294 aa3.22□□□□□ -1.89
RPL40AYIL148W FMP25Q08023 583 aa3.22□□□□□ -1.89
RPL40AYIL148W CIT2P08679 460 aa3.21□□□□□ -1.9
RPL40AYIL148W PHO8P11491 566 aa3.21□□□□□ -1.9
RPL40AYIL148W SNF5P18480 905 aa3.21□□□□□ -1.9
RPL40AYIL148W THI4P32318 326 aa3.21□□□□□ -1.9
RPL40AYIL148W STE5P32917 917 aa3.21□□□□□ -1.9
RPL40AYIL148W GEM1P39722 662 aa3.21□□□□□ -1.9
RPL40AYIL148W RPN3P40016 523 aaKnown RBP3.21□□□□□ -1.9
RPL40AYIL148W NUP82P40368 713 aa3.21□□□□□ -1.9
RPL40AYIL148W KIN4Q01919 800 aa3.21□□□□□ -1.9
RPL40AYIL148W UTP14Q04500 899 aaKnown RBP3.21□□□□□ -1.9
RPL40AYIL148W DUS3Q06053 668 aaKnown RBP3.21□□□□□ -1.9
RPL40AYIL148W UBX5Q06682 500 aa3.21□□□□□ -1.9
RPL40AYIL148W GPB1Q08886 897 aa3.21□□□□□ -1.9
RPL40AYIL148W ACM1Q08981 209 aa3.21□□□□□ -1.9
RPL40AYIL148W TOM70P07213 617 aaKnown RBP3.2□□□□□ -1.9
RPL40AYIL148W RPL11AP0C0W9 174 aaKnown RBP3.2□□□□□ -1.9
RPL40AYIL148W YER152CP10356 443 aa3.2□□□□□ -1.9
RPL40AYIL148W TIM23P32897 222 aa3.2□□□□□ -1.9
RPL40AYIL148W PIK1P39104 1066 aa3.2□□□□□ -1.9
RPL40AYIL148W SAH1P39954 449 aaKnown RBP3.2□□□□□ -1.9
RPL40AYIL148W UTP8P53276 713 aaKnown RBP3.2□□□□□ -1.9
RPL40AYIL148W ALG12P53730 551 aa3.2□□□□□ -1.9
RPL40AYIL148W RIB2Q12362 591 aaKnown RBP3.2□□□□□ -1.9
RPL40AYIL148W RPL11BQ3E757 174 aaPredicted RBP3.2□□□□□ -1.9
RPL40AYIL148W CAN1P04817 590 aa3.19□□□□□ -1.9
RPL40AYIL148W SFP1P32432 683 aa3.19□□□□□ -1.9
RPL40AYIL148W UGA2P38067 497 aa3.19□□□□□ -1.9
RPL40AYIL148W YHR020WP38708 688 aaKnown RBP3.19□□□□□ -1.9
RPL40AYIL148W BUD6P41697 788 aa3.19□□□□□ -1.9
RPL40AYIL148W YFL054CP43549 646 aa3.19□□□□□ -1.9
RPL40AYIL148W PFD1P46988 109 aa3.19□□□□□ -1.9
RPL40AYIL148W DOS2P54858 310 aa3.19□□□□□ -1.9
RPL40AYIL148W YAP6Q03935 383 aa3.19□□□□□ -1.9
RPL40AYIL148W RSM24Q03976 319 aa3.19□□□□□ -1.9
RPL40AYIL148W YPL066WQ12194 479 aa3.19□□□□□ -1.9
RPL40AYIL148W YGR161W-CQ3E744 92 aa3.19□□□□□ -1.9
RPL40AYIL148W PMA1P05030 918 aaKnown RBP3.18□□□□□ -1.9
RPL40AYIL148W YRO2P38079 344 aa3.18□□□□□ -1.9
RPL40AYIL148W RFC5P38251 354 aa3.18□□□□□ -1.9
RPL40AYIL148W PNT1P38969 423 aa3.18□□□□□ -1.9
RPL40AYIL148W MSS4P38994 779 aa3.18□□□□□ -1.9
RPL40AYIL148W MXR1P40029 184 aa3.18□□□□□ -1.9
RPL40AYIL148W GTF1P53260 183 aaPredicted RBP3.18□□□□□ -1.9
RPL40AYIL148W VPS62P53285 467 aa3.18□□□□□ -1.9
RPL40AYIL148W YLR224WQ05947 369 aa3.18□□□□□ -1.9
RPL40AYIL148W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
RPL40AYIL148W EMC1P25574 760 aa3.17□□□□□ -1.9
RPL40AYIL148W DEF1P35732 738 aaKnown RBP3.17□□□□□ -1.9
RPL40AYIL148W SPC42P36094 363 aa3.17□□□□□ -1.9
RPL40AYIL148W YBR284WP38150 797 aa3.17□□□□□ -1.9
RPL40AYIL148W MNN1P39106 762 aa3.17□□□□□ -1.9
RPL40AYIL148W SIP5P40210 489 aaKnown RBP3.17□□□□□ -1.9
RPL40AYIL148W GCV2P49095 1034 aa3.17□□□□□ -1.9
RPL40AYIL148W HSV2P50079 448 aaPredicted RBP3.17□□□□□ -1.9
RPL40AYIL148W TAF8Q03750 510 aa3.17□□□□□ -1.9
RPL40AYIL148W YPR196WQ06595 470 aa3.17□□□□□ -1.9
RPL40AYIL148W YPR071WQ12346 211 aa3.17□□□□□ -1.9
RPL40AYIL148W GSY1P23337 708 aa3.16□□□□□ -1.9
RPL40AYIL148W DCG1P32460 244 aa3.16□□□□□ -1.9
RPL40AYIL148W GUS1P46655 708 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
RPL40AYIL148W CCM1P48237 864 aaPredicted RBP3.16□□□□□ -1.9
RPL40AYIL148W NIT3P49954 291 aa3.16□□□□□ -1.9
RPL40AYIL148W PBP1P53297 722 aaKnown RBP3.16□□□□□ -1.9
RPL40AYIL148W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
RPL40AYIL148W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
RPL40AYIL148W LCD1Q04377 747 aa3.16□□□□□ -1.9
RPL40AYIL148W PPM2Q08282 695 aa3.16□□□□□ -1.9
RPL40AYIL148W HMI1Q12039 706 aa3.16□□□□□ -1.9
RPL40AYIL148W HBN1Q96VH4 193 aa3.16□□□□□ -1.9
RPL40AYIL148W ERR1P0CX10 437 aa3.15□□□□□ -1.91
RPL40AYIL148W ERR2P0CX11 437 aa3.15□□□□□ -1.91
RPL40AYIL148W KIN2P13186 1147 aaKnown RBP3.15□□□□□ -1.91
RPL40AYIL148W DBP2P24783 546 aaKnown RBP3.15□□□□□ -1.91
RPL40AYIL148W REC104P33323 182 aa3.15□□□□□ -1.91
RPL40AYIL148W SIT1P39980 628 aa3.15□□□□□ -1.91
RPL40AYIL148W RRT14P40470 206 aa3.15□□□□□ -1.91
RPL40AYIL148W VPS30Q02948 557 aa3.15□□□□□ -1.91
RPL40AYIL148W OSW2Q12202 724 aa3.15□□□□□ -1.91
RPL40AYIL148W SVS1Q12254 260 aa3.15□□□□□ -1.91
RPL40AYIL148W PHR1P05066 565 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
RPL40AYIL148W RFA1P22336 621 aaKnown RBP3.14□□□□□ -1.91
RPL40AYIL148W HBS1P32769 611 aaKnown RBP3.14□□□□□ -1.91
RPL40AYIL148W SLA2P33338 968 aa3.14□□□□□ -1.91
RPL40AYIL148W DSS1P39112 969 aa3.14□□□□□ -1.91
RPL40AYIL148W UBP6P43593 499 aaKnown RBP3.14□□□□□ -1.91
RPL40AYIL148W URN1Q06525 465 aaKnown RBP3.14□□□□□ -1.91
RPL40AYIL148W YLL058WQ12198 575 aa3.14□□□□□ -1.91
RPL40AYIL148W BI4P03879 638 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 169.6 ms