RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C YSC84P32793 468 aa5.67□□□□□ -1.5
SDS3YIL084C VBA5P36172 582 aa5.67□□□□□ -1.5
SDS3YIL084C YHL012WP38709 493 aa5.67□□□□□ -1.5
SDS3YIL084C IRR1P40541 1150 aa5.67□□□□□ -1.5
SDS3YIL084C ORC3P54790 616 aa5.67□□□□□ -1.5
SDS3YIL084C HOS3Q02959 697 aaKnown RBP5.67□□□□□ -1.5
SDS3YIL084C SPO75Q07798 868 aa5.67□□□□□ -1.5
SDS3YIL084C YVC1Q12324 675 aa5.67□□□□□ -1.5
SDS3YIL084C AIM44Q99299 758 aa5.67□□□□□ -1.5
SDS3YIL084C YER152CP10356 443 aa5.66□□□□□ -1.5
SDS3YIL084C RAD4P14736 754 aa5.66□□□□□ -1.5
SDS3YIL084C PBY1P38254 753 aa5.66□□□□□ -1.5
SDS3YIL084C AIM3P38266 947 aaKnown RBP5.66□□□□□ -1.5
SDS3YIL084C PEX7P39108 375 aa5.66□□□□□ -1.5
SDS3YIL084C TIM54P47045 478 aa5.66□□□□□ -1.5
SDS3YIL084C TNA1P53322 534 aa5.66□□□□□ -1.5
SDS3YIL084C NSE3Q05541 303 aa5.66□□□□□ -1.5
SDS3YIL084C TRE1Q08919 783 aa5.66□□□□□ -1.5
SDS3YIL084C CDC53Q12018 815 aaKnown RBP5.66□□□□□ -1.5
SDS3YIL084C YPL066WQ12194 479 aa5.66□□□□□ -1.5
SDS3YIL084C YOR131CQ12486 218 aa5.66□□□□□ -1.5
SDS3YIL084C IML1P47170 1584 aa5.65□□□□□ -1.5
SDS3YIL084C CCZ1P38273 704 aa5.65□□□□□ -1.5
SDS3YIL084C YBR184WP38299 523 aa5.65□□□□□ -1.5
SDS3YIL084C ORC1P54784 914 aaPredicted RBP5.65□□□□□ -1.5
SDS3YIL084C FPR4Q06205 392 aaPredicted RBP5.65□□□□□ -1.5
SDS3YIL084C OSH2Q12451 1283 aa5.65□□□□□ -1.5
SDS3YIL084C PRP9P19736 530 aaKnown RBP5.64□□□□□ -1.51
SDS3YIL084C PRO1P32264 428 aa5.64□□□□□ -1.51
SDS3YIL084C SCT1P32784 759 aa5.64□□□□□ -1.51
SDS3YIL084C MDL2P33311 773 aa5.64□□□□□ -1.51
SDS3YIL084C YKL091CP33324 310 aaKnown RBP5.64□□□□□ -1.51
SDS3YIL084C TAT2P38967 592 aa5.64□□□□□ -1.51
SDS3YIL084C NBA1Q08229 501 aaKnown RBP5.64□□□□□ -1.51
SDS3YIL084C YDL177CQ12257 170 aa5.64□□□□□ -1.51
SDS3YIL084C NUP188P52593 1655 aaKnown RBP5.63□□□□□ -1.51
SDS3YIL084C RPL11AP0C0W9 174 aaKnown RBP5.63□□□□□ -1.51
SDS3YIL084C SRO9P25567 434 aaKnown RBP5.63□□□□□ -1.51
SDS3YIL084C STE5P32917 917 aa5.63□□□□□ -1.51
SDS3YIL084C IOC3P43596 787 aa5.63□□□□□ -1.51
SDS3YIL084C ERP6P53198 216 aa5.63□□□□□ -1.51
SDS3YIL084C TPO2P53283 614 aa5.63□□□□□ -1.51
SDS3YIL084C GIS1Q03833 894 aa5.63□□□□□ -1.51
SDS3YIL084C BDF2Q07442 638 aa5.63□□□□□ -1.51
SDS3YIL084C RPL11BQ3E757 174 aaPredicted RBP5.63□□□□□ -1.51
SDS3YIL084C PNT1P38969 423 aa5.62□□□□□ -1.51
SDS3YIL084C MBP1P39678 833 aa5.62□□□□□ -1.51
SDS3YIL084C GEM1P39722 662 aa5.62□□□□□ -1.51
SDS3YIL084C SIP5P40210 489 aaKnown RBP5.62□□□□□ -1.51
SDS3YIL084C ACM1Q08981 209 aa5.62□□□□□ -1.51
SDS3YIL084C THS1P04801 734 aaKnown RBP5.61□□□□□ -1.51
SDS3YIL084C SAM35P14693 329 aa5.61□□□□□ -1.51
SDS3YIL084C BAP2P38084 609 aa5.61□□□□□ -1.51
SDS3YIL084C PIK1P39104 1066 aa5.61□□□□□ -1.51
SDS3YIL084C OSW7P43611 510 aa5.61□□□□□ -1.51
SDS3YIL084C HUL5P53119 910 aa5.61□□□□□ -1.51
SDS3YIL084C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
SDS3YIL084C EAF1Q06337 982 aa5.61□□□□□ -1.51
SDS3YIL084C FMP25Q08023 583 aa5.61□□□□□ -1.51
SDS3YIL084C RSB1Q08417 382 aa5.61□□□□□ -1.51
SDS3YIL084C TY1B-NL2Q99337 1749 aaKnown RBP5.6□□□□□ -1.51
SDS3YIL084C HSP60P19882 572 aaKnown RBP5.6□□□□□ -1.51
SDS3YIL084C RPL8BP29453 256 aaKnown RBP5.6□□□□□ -1.51
SDS3YIL084C PTC7P38797 343 aa5.6□□□□□ -1.51
SDS3YIL084C MXR1P40029 184 aa5.6□□□□□ -1.51
SDS3YIL084C YGR125WP53273 1036 aa5.6□□□□□ -1.51
SDS3YIL084C MRPL22P53881 309 aa5.6□□□□□ -1.51
SDS3YIL084C SNF5P18480 905 aa5.59□□□□□ -1.51
SDS3YIL084C DBP2P24783 546 aaKnown RBP5.59□□□□□ -1.51
SDS3YIL084C ARE1P25628 610 aa5.59□□□□□ -1.51
SDS3YIL084C SRP1Q02821 542 aaKnown RBP5.59□□□□□ -1.51
SDS3YIL084C RPN4Q03465 531 aa5.59□□□□□ -1.51
SDS3YIL084C FLC1Q08967 793 aa5.59□□□□□ -1.51
SDS3YIL084C CDC11P32458 415 aa5.58□□□□□ -1.52
SDS3YIL084C UGA2P38067 497 aa5.58□□□□□ -1.52
SDS3YIL084C GGA2P38817 585 aaKnown RBP5.58□□□□□ -1.52
SDS3YIL084C GTS1P40956 396 aa5.58□□□□□ -1.52
SDS3YIL084C HUL4P40985 892 aa5.58□□□□□ -1.52
SDS3YIL084C ALR2P43553 858 aa5.58□□□□□ -1.52
SDS3YIL084C PFD1P46988 109 aa5.58□□□□□ -1.52
SDS3YIL084C UTP8P53276 713 aaKnown RBP5.58□□□□□ -1.52
SDS3YIL084C YDR306CQ06640 478 aa5.58□□□□□ -1.52
SDS3YIL084C RSC58Q07979 502 aa5.58□□□□□ -1.52
SDS3YIL084C RCL1Q08096 367 aaPredicted RBP5.58□□□□□ -1.52
SDS3YIL084C HAP1P0CE41 1502 aa5.58□□□□□ -1.52
SDS3YIL084C CAT8P39113 1433 aa5.57□□□□□ -1.52
SDS3YIL084C CIT1P00890 479 aa5.57□□□□□ -1.52
SDS3YIL084C PPH3P32345 308 aa5.57□□□□□ -1.52
SDS3YIL084C AAR2P32357 355 aaPredicted RBP5.57□□□□□ -1.52
SDS3YIL084C AIM26P32858 118 aa5.57□□□□□ -1.52
SDS3YIL084C SLA2P33338 968 aa5.57□□□□□ -1.52
SDS3YIL084C ETP1P38748 585 aaKnown RBP5.57□□□□□ -1.52
SDS3YIL084C DUS3Q06053 668 aaKnown RBP5.57□□□□□ -1.52
SDS3YIL084C URN1Q06525 465 aaKnown RBP5.57□□□□□ -1.52
SDS3YIL084C GAL11P19659 1081 aa5.56□□□□□ -1.52
SDS3YIL084C TYS1P36421 394 aaKnown RBP5.56□□□□□ -1.52
SDS3YIL084C YHR020WP38708 688 aaKnown RBP5.56□□□□□ -1.52
SDS3YIL084C CHZ1P40019 153 aaPredicted RBP5.56□□□□□ -1.52
SDS3YIL084C YFL054CP43549 646 aa5.56□□□□□ -1.52
SDS3YIL084C GUS1P46655 708 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms