RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C ISA1Q07821 250 aaPredicted RBP8.35□□□□□ -1.07
SNP1YIL061C FAL1Q12099 399 aaKnown RBP8.35□□□□□ -1.07
SNP1YIL061C GIN4Q12263 1142 aa8.35□□□□□ -1.07
SNP1YIL061C TOM70P07213 617 aaKnown RBP8.34□□□□□ -1.07
SNP1YIL061C SSA1P10591 642 aaKnown RBP8.34□□□□□ -1.07
SNP1YIL061C YDJ1P25491 409 aaKnown RBP8.34□□□□□ -1.07
SNP1YIL061C CLB5P30283 435 aa8.34□□□□□ -1.07
SNP1YIL061C KTR2P33550 425 aa8.34□□□□□ -1.07
SNP1YIL061C MCR1P36060 302 aaKnown RBP8.34□□□□□ -1.07
SNP1YIL061C SDS3P40505 327 aa8.34□□□□□ -1.07
SNP1YIL061C FIG4P42837 879 aa8.34□□□□□ -1.07
SNP1YIL061C TAD1P53065 400 aa8.34□□□□□ -1.07
SNP1YIL061C ARK1P53974 638 aa8.34□□□□□ -1.07
SNP1YIL061C NGL3Q03210 505 aa8.34□□□□□ -1.07
SNP1YIL061C OPY2Q06810 360 aa8.34□□□□□ -1.07
SNP1YIL061C DAS2Q12084 232 aa8.34□□□□□ -1.07
SNP1YIL061C NOP14Q99207 810 aaKnown RBP8.34□□□□□ -1.07
SNP1YIL061C PHO8P11491 566 aa8.33□□□□□ -1.08
SNP1YIL061C TCP1P12612 559 aaKnown RBP8.33□□□□□ -1.08
SNP1YIL061C CKI1P20485 582 aa8.33□□□□□ -1.08
SNP1YIL061C SRB4P32569 687 aa8.33□□□□□ -1.08
SNP1YIL061C YEL1P34225 687 aa8.33□□□□□ -1.08
SNP1YIL061C MAP2P38174 421 aaKnown RBP8.33□□□□□ -1.08
SNP1YIL061C REI1P38344 393 aaPredicted RBP8.33□□□□□ -1.08
SNP1YIL061C CTR1P49573 406 aa8.33□□□□□ -1.08
SNP1YIL061C PRP31P49704 494 aaPredicted RBP8.33□□□□□ -1.08
SNP1YIL061C TOF1P53840 1238 aa8.33□□□□□ -1.08
SNP1YIL061C CWC15Q03772 175 aaKnown RBP8.33□□□□□ -1.08
SNP1YIL061C YPR078CQ06813 372 aa8.33□□□□□ -1.08
SNP1YIL061C SCP160P06105 1222 aaKnown RBP RIP-Chip data8.32□□□□□ -1.08not detected
SNP1YIL061C SHP1P34223 423 aa8.32□□□□□ -1.08
SNP1YIL061C YKR018CP36114 725 aa8.32□□□□□ -1.08
SNP1YIL061C VAB2P40003 282 aa8.32□□□□□ -1.08
SNP1YIL061C RPN3P40016 523 aaKnown RBP8.32□□□□□ -1.08
SNP1YIL061C LCB2P40970 561 aa8.32□□□□□ -1.08
SNP1YIL061C SMC3P47037 1230 aa8.32□□□□□ -1.08
SNP1YIL061C NCS2P53923 493 aaPredicted RBP8.32□□□□□ -1.08
SNP1YIL061C RBA50Q04418 439 aa8.32□□□□□ -1.08
SNP1YIL061C SOV1Q04748 898 aa8.32□□□□□ -1.08
SNP1YIL061C DUS3Q06053 668 aaKnown RBP8.32□□□□□ -1.08
SNP1YIL061C UTR4P32626 227 aa8.31□□□□□ -1.08
SNP1YIL061C YSC83P32792 385 aa8.31□□□□□ -1.08
SNP1YIL061C UBP13P38187 747 aa8.31□□□□□ -1.08
SNP1YIL061C SET5P38890 526 aaKnown RBP8.31□□□□□ -1.08
SNP1YIL061C ZPR1P53303 486 aaKnown RBP8.31□□□□□ -1.08
SNP1YIL061C PEX29Q03370 554 aa8.31□□□□□ -1.08
SNP1YIL061C GIR2Q03768 265 aaPredicted RBP8.31□□□□□ -1.08
SNP1YIL061C YLR297WQ05899 129 aa8.31□□□□□ -1.08
SNP1YIL061C PUS5Q06244 254 aa8.31□□□□□ -1.08
SNP1YIL061C CRD1Q07560 283 aa8.31□□□□□ -1.08
SNP1YIL061C RLP24Q07915 199 aaKnown RBP8.31□□□□□ -1.08
SNP1YIL061C MLH2Q07980 695 aa8.31□□□□□ -1.08
SNP1YIL061C SMC1P32908 1225 aa8.3□□□□□ -1.08
SNP1YIL061C XRS2P33301 854 aa8.3□□□□□ -1.08
SNP1YIL061C SMF1P38925 575 aa8.3□□□□□ -1.08
SNP1YIL061C PNT1P38969 423 aa8.3□□□□□ -1.08
SNP1YIL061C CIN4P39110 191 aa8.3□□□□□ -1.08
SNP1YIL061C GPB2P39717 880 aa8.3□□□□□ -1.08
SNP1YIL061C MMM1P41800 426 aa8.3□□□□□ -1.08
SNP1YIL061C COS5P47187 383 aa8.3□□□□□ -1.08
SNP1YIL061C RRT6P53117 311 aaPredicted RBP8.3□□□□□ -1.08
SNP1YIL061C YGL039WP53183 348 aaKnown RBP8.3□□□□□ -1.08
SNP1YIL061C POB3Q04636 552 aaKnown RBP8.3□□□□□ -1.08
SNP1YIL061C YLR001CQ07895 862 aa8.3□□□□□ -1.08
SNP1YIL061C SIL1Q08199 421 aa8.3□□□□□ -1.08
SNP1YIL061C RKM4Q12504 494 aa8.3□□□□□ -1.08
SNP1YIL061C RPO26P20435 155 aa8.29□□□□□ -1.08
SNP1YIL061C NIP100P33420 868 aa8.29□□□□□ -1.08
SNP1YIL061C BYE1P36106 594 aa8.29□□□□□ -1.08
SNP1YIL061C CCT4P39078 528 aaKnown RBP8.29□□□□□ -1.08
SNP1YIL061C HMF1P40037 129 aaKnown RBP8.29□□□□□ -1.08
SNP1YIL061C HXT8P40886 569 aa8.29□□□□□ -1.08
SNP1YIL061C NET1P47035 1189 aa8.29□□□□□ -1.08
SNP1YIL061C BTN2P53286 410 aa8.29□□□□□ -1.08
SNP1YIL061C ESBP6P53918 673 aa8.29□□□□□ -1.08
SNP1YIL061C RRB1Q04225 511 aaKnown RBP8.29□□□□□ -1.08
SNP1YIL061C CSR1Q06705 408 aaKnown RBP8.29□□□□□ -1.08
SNP1YIL061C TYW1Q08960 810 aaKnown RBP8.29□□□□□ -1.08
SNP1YIL061C OSH2Q12451 1283 aa8.29□□□□□ -1.08
SNP1YIL061C TRP2P00899 507 aaKnown RBP8.28□□□□□ -1.08
SNP1YIL061C VMA2P16140 517 aaKnown RBP8.28□□□□□ -1.08
SNP1YIL061C DBP5P20449 482 aaKnown RBP8.28□□□□□ -1.08
SNP1YIL061C TKL1P23254 680 aaKnown RBP8.28□□□□□ -1.08
SNP1YIL061C HUL5P53119 910 aa8.28□□□□□ -1.08
SNP1YIL061C YGR125WP53273 1036 aa8.28□□□□□ -1.08
SNP1YIL061C YAF9P53930 226 aa8.28□□□□□ -1.08
SNP1YIL061C TIM8P57744 87 aa8.28□□□□□ -1.08
SNP1YIL061C DON1Q05610 365 aa8.28□□□□□ -1.08
SNP1YIL061C ATG23Q06671 453 aa8.28□□□□□ -1.08
SNP1YIL061C TSR1Q07381 788 aaKnown RBP8.28□□□□□ -1.08
SNP1YIL061C ERP3Q12403 225 aa8.28□□□□□ -1.08
SNP1YIL061C RMP1Q12530 201 aa8.28□□□□□ -1.08
SNP1YIL061C CDC19P00549 500 aaKnown RBP8.27□□□□□ -1.09
SNP1YIL061C SWI6P09959 803 aa8.27□□□□□ -1.09
SNP1YIL061C CHS2P14180 963 aa8.27□□□□□ -1.09
SNP1YIL061C SIS1P25294 352 aaKnown RBP8.27□□□□□ -1.09
SNP1YIL061C PAP1P29468 568 aaKnown RBP8.27□□□□□ -1.09
SNP1YIL061C NAM7P30771 971 aaKnown RBP8.27□□□□□ -1.09
SNP1YIL061C CNS1P33313 385 aa8.27□□□□□ -1.09
SNP1YIL061C MCD4P36051 919 aa8.27□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms