RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC4YER147C VID30P53076 958 aa12.95□□□□□ -0.34
SCC4YER147C YGR021WP53212 290 aa12.95□□□□□ -0.34
SCC4YER147C SEN54Q02825 467 aaPredicted RBP12.95□□□□□ -0.34
SCC4YER147C APL5Q08951 932 aaKnown RBP12.95□□□□□ -0.34
SCC4YER147C YPL277CQ08989 487 aa12.95□□□□□ -0.34
SCC4YER147C DIP2Q12220 943 aaPredicted RBP12.95□□□□□ -0.34
SCC4YER147C UTP7P40055 554 aaKnown RBP12.95□□□□□ -0.34
SCC4YER147C ORC4P54791 529 aa12.95□□□□□ -0.34
SCC4YER147C CRF1Q04930 467 aa12.95□□□□□ -0.34
SCC4YER147C ZRT2Q12436 422 aa12.95□□□□□ -0.34
SCC4YER147C MCD4P36051 919 aa12.94□□□□□ -0.34
SCC4YER147C UTP14Q04500 899 aaKnown RBP12.94□□□□□ -0.34
SCC4YER147C HXT8P40886 569 aa12.93□□□□□ -0.34
SCC4YER147C DIG1Q03063 452 aaKnown RBP12.93□□□□□ -0.34
SCC4YER147C TUB2P02557 457 aaKnown RBP12.93□□□□□ -0.34
SCC4YER147C SPP381P38282 291 aaPredicted RBP12.93□□□□□ -0.34
SCC4YER147C RPC17P47076 161 aa12.93□□□□□ -0.34
SCC4YER147C ECI1Q05871 280 aa12.93□□□□□ -0.34
SCC4YER147C YLR297WQ05899 129 aa12.93□□□□□ -0.34
SCC4YER147C ARP6Q12509 438 aa12.93□□□□□ -0.34
SCC4YER147C ECM1P39715 212 aa12.92□□□□□ -0.34
SCC4YER147C PXA1P41909 870 aa12.92□□□□□ -0.34
SCC4YER147C FKS1P38631 1876 aaKnown RBP12.92□□□□□ -0.34
SCC4YER147C TRP2P00899 507 aaKnown RBP12.91□□□□□ -0.34
SCC4YER147C PCK1P10963 549 aa12.91□□□□□ -0.34
SCC4YER147C UBC6P33296 250 aaPredicted RBP12.91□□□□□ -0.34
SCC4YER147C TPS3P38426 1054 aaKnown RBP12.91□□□□□ -0.34
SCC4YER147C ULP2P40537 1034 aaPredicted RBP12.91□□□□□ -0.34
SCC4YER147C COS5P47187 383 aa12.91□□□□□ -0.34
SCC4YER147C VPS4P52917 437 aa12.91□□□□□ -0.34
SCC4YER147C RIO1Q12196 484 aaKnown RBP12.91□□□□□ -0.34
SCC4YER147C PGM1P33401 570 aaKnown RBP12.91□□□□□ -0.34
SCC4YER147C YKL023WP36103 277 aaKnown RBP12.91□□□□□ -0.34
SCC4YER147C TIF4631P39935 952 aaKnown RBP12.91□□□□□ -0.34
SCC4YER147C DIP5P53388 608 aa12.91□□□□□ -0.34
SCC4YER147C SWI6P09959 803 aa12.9□□□□□ -0.34
SCC4YER147C UGA4P32837 571 aa12.9□□□□□ -0.34
SCC4YER147C SEC8P32855 1065 aa12.9□□□□□ -0.34
SCC4YER147C YEL1P34225 687 aa12.9□□□□□ -0.34
SCC4YER147C MED8P38304 223 aa12.9□□□□□ -0.34
SCC4YER147C RCK2P38623 610 aa12.9□□□□□ -0.34
SCC4YER147C SHC1P39000 512 aa12.9□□□□□ -0.34
SCC4YER147C FIG4P42837 879 aa12.9□□□□□ -0.34
SCC4YER147C SOL4P53315 255 aa12.9□□□□□ -0.34
SCC4YER147C CSR1Q06705 408 aaKnown RBP12.9□□□□□ -0.34
SCC4YER147C SRD1P09007 221 aa12.89□□□□□ -0.35
SCC4YER147C SUP45P12385 437 aaKnown RBP12.89□□□□□ -0.35
SCC4YER147C TRS85P46944 698 aa12.89□□□□□ -0.35
SCC4YER147C ENV11P53246 860 aa12.89□□□□□ -0.35
SCC4YER147C SYH1Q02875 849 aaKnown RBP12.89□□□□□ -0.35
SCC4YER147C PGM2P37012 569 aaKnown RBP12.89□□□□□ -0.35
SCC4YER147C CLN3P13365 580 aa12.88□□□□□ -0.35
SCC4YER147C PRP22P24384 1145 aaKnown RBP12.88□□□□□ -0.35
SCC4YER147C KEL1P38853 1164 aaKnown RBP12.88□□□□□ -0.35
SCC4YER147C CNM67P53865 581 aaKnown RBP12.88□□□□□ -0.35
SCC4YER147C ESBP6P53918 673 aa12.88□□□□□ -0.35
SCC4YER147C EEB1Q02891 456 aa12.88□□□□□ -0.35
SCC4YER147C YMR018WQ04364 514 aa12.88□□□□□ -0.35
SCC4YER147C BLI1P35727 113 aa12.87□□□□□ -0.35
SCC4YER147C STV1P37296 890 aa12.87□□□□□ -0.35
SCC4YER147C YER156CP40093 338 aaKnown RBP12.87□□□□□ -0.35
SCC4YER147C YNL320WP42840 284 aa12.87□□□□□ -0.35
SCC4YER147C YJR039WP47107 1121 aa12.87□□□□□ -0.35
SCC4YER147C WHI4Q07655 649 aaKnown RBP12.87□□□□□ -0.35
SCC4YER147C PHO8P11491 566 aa12.87□□□□□ -0.35
SCC4YER147C KRS1P15180 591 aaKnown RBP12.87□□□□□ -0.35
SCC4YER147C ESS1P22696 170 aa12.87□□□□□ -0.35
SCC4YER147C SPT21P35209 758 aa12.87□□□□□ -0.35
SCC4YER147C RPN3P40016 523 aaKnown RBP12.87□□□□□ -0.35
SCC4YER147C GPD2P41911 440 aaKnown RBP12.87□□□□□ -0.35
SCC4YER147C YPL225WQ08971 146 aaKnown RBP12.87□□□□□ -0.35
SCC4YER147C ARG4P04076 463 aaPredicted RBP12.86□□□□□ -0.35
SCC4YER147C ERG12P07277 443 aa12.86□□□□□ -0.35
SCC4YER147C YKL050CP35736 922 aa12.86□□□□□ -0.35
SCC4YER147C JJJ1P53863 590 aa12.86□□□□□ -0.35
SCC4YER147C CUR1Q06469 252 aa12.86□□□□□ -0.35
SCC4YER147C SPO21Q12411 609 aa12.86□□□□□ -0.35
SCC4YER147C PHR1P05066 565 aaKnown RBP RIP-Chip data12.85□□□□□ -0.35not detected
SCC4YER147C MSM1P22438 575 aa12.85□□□□□ -0.35
SCC4YER147C SUV3P32580 737 aa12.85□□□□□ -0.35
SCC4YER147C BCH2P36122 765 aa12.85□□□□□ -0.35
SCC4YER147C UBP13P38187 747 aa12.85□□□□□ -0.35
SCC4YER147C VHR2P40041 505 aa12.85□□□□□ -0.35
SCC4YER147C LCB2P40970 561 aa12.85□□□□□ -0.35
SCC4YER147C ALD6P54115 500 aaKnown RBP12.85□□□□□ -0.35
SCC4YER147C RLP24Q07915 199 aaKnown RBP12.85□□□□□ -0.35
SCC4YER147C SDH5Q08230 162 aa12.85□□□□□ -0.35
SCC4YER147C AIM41Q12032 185 aa12.85□□□□□ -0.35
SCC4YER147C CHS2P14180 963 aa12.85□□□□□ -0.35
SCC4YER147C LIF1P53150 421 aa12.85□□□□□ -0.35
SCC4YER147C ARK1P53974 638 aa12.85□□□□□ -0.35
SCC4YER147C UBP3Q01477 912 aaKnown RBP RIP-Chip data12.85□□□□□ -0.35 RIP-Chip
SCC4YER147C TRM44Q02648 567 aaKnown RBP12.85□□□□□ -0.35
SCC4YER147C YML082WQ04533 649 aaKnown RBP12.85□□□□□ -0.35
SCC4YER147C RPS9BP05755 195 aaKnown RBP12.84□□□□□ -0.35
SCC4YER147C PRP9P19736 530 aaKnown RBP12.84□□□□□ -0.35
SCC4YER147C PHO88P38264 188 aaPredicted RBP12.84□□□□□ -0.35
SCC4YER147C CCT2P39076 527 aaKnown RBP12.84□□□□□ -0.35
SCC4YER147C LCP5P40079 357 aaPredicted RBP12.84□□□□□ -0.35
SCC4YER147C PSY2P40164 858 aa12.84□□□□□ -0.35
Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms