RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C ATG9Q12142 997 aa6.34□□□□□ -1.39
SEC20YDR498C PPR1P07272 904 aaPredicted RBP6.33□□□□□ -1.4
SEC20YDR498C SUP45P12385 437 aaKnown RBP6.33□□□□□ -1.4
SEC20YDR498C SIP3P38717 1229 aa6.33□□□□□ -1.4
SEC20YDR498C XDJ1P39102 459 aa6.33□□□□□ -1.4
SEC20YDR498C VFA1P40080 203 aa6.33□□□□□ -1.4
SEC20YDR498C ATG3P40344 310 aa6.33□□□□□ -1.4
SEC20YDR498C TPM2P40414 161 aa6.33□□□□□ -1.4
SEC20YDR498C TOS3P43637 560 aa6.33□□□□□ -1.4
SEC20YDR498C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
SEC20YDR498C NBP1P52919 319 aaPredicted RBP6.33□□□□□ -1.4
SEC20YDR498C CAF130P53280 1122 aaPredicted RBP6.33□□□□□ -1.4
SEC20YDR498C LSB1P53281 241 aa6.33□□□□□ -1.4
SEC20YDR498C ERG5P54781 538 aa6.33□□□□□ -1.4
SEC20YDR498C UME1Q03010 460 aa6.33□□□□□ -1.4
SEC20YDR498C OYE2Q03558 400 aaKnown RBP6.33□□□□□ -1.4
SEC20YDR498C CSM3Q04659 317 aa6.33□□□□□ -1.4
SEC20YDR498C DUS3Q06053 668 aaKnown RBP6.33□□□□□ -1.4
SEC20YDR498C BUD20Q08004 166 aaPredicted RBP6.33□□□□□ -1.4
SEC20YDR498C AIM7Q12156 149 aa6.33□□□□□ -1.4
SEC20YDR498C MCM16Q12262 181 aa6.33□□□□□ -1.4
SEC20YDR498C SMC6Q12749 1114 aa6.33□□□□□ -1.4
SEC20YDR498C ERG12P07277 443 aa6.32□□□□□ -1.4
SEC20YDR498C PFK1P16861 987 aaKnown RBP6.32□□□□□ -1.4
SEC20YDR498C DAL7P21826 554 aa6.32□□□□□ -1.4
SEC20YDR498C GCD11P32481 527 aaKnown RBP6.32□□□□□ -1.4
SEC20YDR498C EBP2P36049 427 aaKnown RBP6.32□□□□□ -1.4
SEC20YDR498C ISW1P38144 1129 aa6.32□□□□□ -1.4
SEC20YDR498C TPS3P38426 1054 aaKnown RBP6.32□□□□□ -1.4
SEC20YDR498C SPT8P38915 602 aa6.32□□□□□ -1.4
SEC20YDR498C NUP82P40368 713 aa6.32□□□□□ -1.4
SEC20YDR498C SHQ1P40486 507 aaPredicted RBP6.32□□□□□ -1.4
SEC20YDR498C HOS3Q02959 697 aaKnown RBP6.32□□□□□ -1.4
SEC20YDR498C SPH1Q06160 661 aa6.32□□□□□ -1.4
SEC20YDR498C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
SEC20YDR498C UBC1P21734 215 aaKnown RBP6.31□□□□□ -1.4
SEC20YDR498C RAD57P25301 460 aa6.31□□□□□ -1.4
SEC20YDR498C STO1P34160 861 aaKnown RBP6.31□□□□□ -1.4
SEC20YDR498C EFM4P40516 257 aa6.31□□□□□ -1.4
SEC20YDR498C IES1P43579 692 aa6.31□□□□□ -1.4
SEC20YDR498C ALF1P53904 254 aa6.31□□□□□ -1.4
SEC20YDR498C BOP3P53958 396 aa6.31□□□□□ -1.4
SEC20YDR498C PTA1Q01329 785 aaPredicted RBP6.31□□□□□ -1.4
SEC20YDR498C YCG1Q06680 1035 aa6.31□□□□□ -1.4
SEC20YDR498C FAL1Q12099 399 aaKnown RBP6.31□□□□□ -1.4
SEC20YDR498C PRT1P06103 763 aaKnown RBP6.3□□□□□ -1.4
SEC20YDR498C SSA1P10591 642 aaKnown RBP6.3□□□□□ -1.4
SEC20YDR498C SEC23P15303 768 aaKnown RBP6.3□□□□□ -1.4
SEC20YDR498C OM45P16547 393 aa6.3□□□□□ -1.4
SEC20YDR498C PET123P17558 318 aa6.3□□□□□ -1.4
SEC20YDR498C SEC20P28791 383 aa6.3□□□□□ -1.4
SEC20YDR498C SUV3P32580 737 aa6.3□□□□□ -1.4
SEC20YDR498C ERC1P38767 581 aa6.3□□□□□ -1.4
SEC20YDR498C CEP3P40969 608 aa6.3□□□□□ -1.4
SEC20YDR498C LIF1P53150 421 aa6.3□□□□□ -1.4
SEC20YDR498C VPS38Q05919 439 aa6.3□□□□□ -1.4
SEC20YDR498C ESC2Q06340 456 aa6.3□□□□□ -1.4
SEC20YDR498C YLH47Q06493 454 aa6.3□□□□□ -1.4
SEC20YDR498C GUD1Q07729 489 aa6.3□□□□□ -1.4
SEC20YDR498C SPO75Q07798 868 aa6.3□□□□□ -1.4
SEC20YDR498C SIL1Q08199 421 aa6.3□□□□□ -1.4
SEC20YDR498C RRP6Q12149 733 aaKnown RBP6.3□□□□□ -1.4
SEC20YDR498C KEX2P13134 814 aa6.29□□□□□ -1.4
SEC20YDR498C GAL2P13181 574 aa6.29□□□□□ -1.4
SEC20YDR498C CLN3P13365 580 aa6.29□□□□□ -1.4
SEC20YDR498C STE11P23561 717 aa6.29□□□□□ -1.4
SEC20YDR498C PDC6P26263 563 aaKnown RBP6.29□□□□□ -1.4
SEC20YDR498C UTR4P32626 227 aa6.29□□□□□ -1.4
SEC20YDR498C SAP190P36123 1033 aa6.29□□□□□ -1.4
SEC20YDR498C EFM2P38347 419 aa6.29□□□□□ -1.4
SEC20YDR498C PEA2P40091 420 aa6.29□□□□□ -1.4
SEC20YDR498C FIS1P40515 155 aa6.29□□□□□ -1.4
SEC20YDR498C LCB2P40970 561 aa6.29□□□□□ -1.4
SEC20YDR498C NIS1P53939 407 aa6.29□□□□□ -1.4
SEC20YDR498C YLR001CQ07895 862 aa6.29□□□□□ -1.4
SEC20YDR498C NEW1Q08972 1196 aaKnown RBP6.29□□□□□ -1.4
SEC20YDR498C GIN4Q12263 1142 aa6.29□□□□□ -1.4
SEC20YDR498C YOL098CQ12496 1037 aa6.29□□□□□ -1.4
SEC20YDR498C RKM4Q12504 494 aa6.29□□□□□ -1.4
SEC20YDR498C PGK1P00560 416 aaKnown RBP6.28□□□□□ -1.4
SEC20YDR498C SRD1P09007 221 aa6.28□□□□□ -1.4
SEC20YDR498C MTF2P10849 440 aa6.28□□□□□ -1.4
SEC20YDR498C MAK16P10962 306 aaPredicted RBP6.28□□□□□ -1.4
SEC20YDR498C SPC110P32380 944 aa6.28□□□□□ -1.4
SEC20YDR498C CDC11P32458 415 aa6.28□□□□□ -1.4
SEC20YDR498C MCR1P36060 302 aaKnown RBP6.28□□□□□ -1.4
SEC20YDR498C SET5P38890 526 aaKnown RBP6.28□□□□□ -1.4
SEC20YDR498C FYV8P46949 817 aaKnown RBP6.28□□□□□ -1.4
SEC20YDR498C APT1P49435 187 aaKnown RBP6.28□□□□□ -1.4
SEC20YDR498C TOF1P53840 1238 aa6.28□□□□□ -1.4
SEC20YDR498C ERF2Q06551 359 aa6.28□□□□□ -1.4
SEC20YDR498C SUB2Q07478 446 aaKnown RBP6.28□□□□□ -1.4
SEC20YDR498C YPL277CQ08989 487 aa6.28□□□□□ -1.4
SEC20YDR498C ERP3Q12403 225 aa6.28□□□□□ -1.4
SEC20YDR498C TOM70P07213 617 aaKnown RBP6.27□□□□□ -1.41
SEC20YDR498C SSB1P11484 613 aaKnown RBP6.27□□□□□ -1.41
SEC20YDR498C PWP2P25635 923 aaKnown RBP6.27□□□□□ -1.41
SEC20YDR498C PAP1P29468 568 aaKnown RBP6.27□□□□□ -1.41
SEC20YDR498C PGM1P33401 570 aaKnown RBP6.27□□□□□ -1.41
SEC20YDR498C OCT1P35999 772 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 76.7 ms