RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A TDA9Q04545 1251 aa2.59□□□□□ -1.99
SDH6YDR379C-A UPC2Q12151 913 aa2.59□□□□□ -1.99
SDH6YDR379C-A FAA3P39002 694 aa2.58□□□□□ -2
SDH6YDR379C-A ENT3P47160 408 aa2.58□□□□□ -2
SDH6YDR379C-A RPL34AP87262 121 aaPredicted RBP2.58□□□□□ -2
SDH6YDR379C-A PHO4P07270 312 aaKnown RBP2.57□□□□□ -2
SDH6YDR379C-A ECM21P38167 1117 aaKnown RBP2.57□□□□□ -2
SDH6YDR379C-A RGT2Q12300 763 aa2.57□□□□□ -2
SDH6YDR379C-A PCL5P38794 229 aa2.56□□□□□ -2
SDH6YDR379C-A ERP5P38819 212 aa2.56□□□□□ -2
SDH6YDR379C-A MPS1P54199 764 aa2.56□□□□□ -2
SDH6YDR379C-A SLU7Q02775 382 aaKnown RBP2.56□□□□□ -2
SDH6YDR379C-A RIM13Q03792 727 aa2.56□□□□□ -2
SDH6YDR379C-A ADY4Q05955 493 aa2.56□□□□□ -2
SDH6YDR379C-A GNT1Q12096 491 aa2.56□□□□□ -2
SDH6YDR379C-A MET3P08536 511 aa2.55□□□□□ -2
SDH6YDR379C-A SED4P25365 1065 aa2.55□□□□□ -2
SDH6YDR379C-A HXT13P39924 564 aa2.55□□□□□ -2
SDH6YDR379C-A MEP2P41948 499 aa2.55□□□□□ -2
SDH6YDR379C-A HXT17P53631 564 aa2.55□□□□□ -2
SDH6YDR379C-A HXT15P54854 567 aa2.55□□□□□ -2
SDH6YDR379C-A STE4P18851 423 aa2.54□□□□□ -2
SDH6YDR379C-A SPO11P23179 398 aa2.54□□□□□ -2
SDH6YDR379C-A PTP1P25044 335 aa2.54□□□□□ -2
SDH6YDR379C-A SEC8P32855 1065 aa2.54□□□□□ -2
SDH6YDR379C-A MCM7P38132 845 aa2.54□□□□□ -2
SDH6YDR379C-A RSP5P39940 809 aaKnown RBP2.54□□□□□ -2
SDH6YDR379C-A ELO3P40319 345 aa2.54□□□□□ -2
SDH6YDR379C-A APM1Q00776 475 aaPredicted RBP2.54□□□□□ -2
SDH6YDR379C-A DLT1Q04216 342 aa2.54□□□□□ -2
SDH6YDR379C-A RQC2Q12532 1038 aaKnown RBP2.54□□□□□ -2
SDH6YDR379C-A STE14P32584 239 aa2.53□□□□□ -2
SDH6YDR379C-A GIS2P53849 153 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
SDH6YDR379C-A SPP382Q06411 708 aaPredicted RBP2.53□□□□□ -2
SDH6YDR379C-A PNT1P38969 423 aa2.52□□□□□ -2.01
SDH6YDR379C-A DMA2P53924 522 aa2.52□□□□□ -2.01
SDH6YDR379C-A PEX19Q07418 342 aa2.52□□□□□ -2.01
SDH6YDR379C-A SUB2Q07478 446 aaKnown RBP2.52□□□□□ -2.01
SDH6YDR379C-A HXK1P04806 485 aaKnown RBP2.51□□□□□ -2.01
SDH6YDR379C-A BNA3P47039 444 aaKnown RBP2.51□□□□□ -2.01
SDH6YDR379C-A SEG1Q04279 960 aa2.51□□□□□ -2.01
SDH6YDR379C-A YBL113CQ7M4S9 792 aa2.51□□□□□ -2.01
SDH6YDR379C-A CAF20P12962 161 aaKnown RBP2.5□□□□□ -2.01
SDH6YDR379C-A HOM2P13663 365 aaKnown RBP2.5□□□□□ -2.01
SDH6YDR379C-A PRE9P23638 258 aaKnown RBP2.5□□□□□ -2.01
SDH6YDR379C-A DMC1P25453 334 aa2.5□□□□□ -2.01
SDH6YDR379C-A CRR1Q05790 422 aa2.5□□□□□ -2.01
SDH6YDR379C-A MDM38Q08179 573 aa2.5□□□□□ -2.01
SDH6YDR379C-A FUN30P31380 1131 aa2.49□□□□□ -2.01
SDH6YDR379C-A CTF13P35203 478 aa2.49□□□□□ -2.01
SDH6YDR379C-A NET1P47035 1189 aa2.49□□□□□ -2.01
SDH6YDR379C-A SRT1Q03175 343 aa2.49□□□□□ -2.01
SDH6YDR379C-A MRL1Q06815 381 aa2.49□□□□□ -2.01
SDH6YDR379C-A CIR2Q08822 631 aa2.49□□□□□ -2.01
SDH6YDR379C-A GIC1P38785 314 aa2.48□□□□□ -2.01
SDH6YDR379C-A GNP1P48813 663 aa2.48□□□□□ -2.01
SDH6YDR379C-A TIF35Q04067 274 aaKnown RBP2.48□□□□□ -2.01
SDH6YDR379C-A MRPS18P42847 217 aa2.47□□□□□ -2.01
SDH6YDR379C-A DAM1P53267 343 aa2.47□□□□□ -2.01
SDH6YDR379C-A RIA1P53893 1110 aa2.47□□□□□ -2.01
SDH6YDR379C-A MCD1Q12158 566 aa2.47□□□□□ -2.01
SDH6YDR379C-A YLL058WQ12198 575 aa2.47□□□□□ -2.01
SDH6YDR379C-A SEC21P32074 935 aaKnown RBP2.46□□□□□ -2.02
SDH6YDR379C-A YKL151CP36059 337 aa2.46□□□□□ -2.02
SDH6YDR379C-A MUP1P50276 574 aa2.46□□□□□ -2.02
SDH6YDR379C-A CBR1P38626 284 aaKnown RBP2.45□□□□□ -2.02
SDH6YDR379C-A YJL163CP46996 555 aa2.45□□□□□ -2.02
SDH6YDR379C-A HRQ1Q05549 1077 aa2.45□□□□□ -2.02
SDH6YDR379C-A TRM11Q12463 433 aa2.45□□□□□ -2.02
SDH6YDR379C-A VPS34P22543 875 aa2.44□□□□□ -2.02
SDH6YDR379C-A EMP70P32802 667 aa2.44□□□□□ -2.02
SDH6YDR379C-A LTP1P40347 161 aa2.44□□□□□ -2.02
SDH6YDR379C-A FKH2P41813 862 aa2.44□□□□□ -2.02
SDH6YDR379C-A NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
SDH6YDR379C-A YLR149CQ99296 730 aa2.44□□□□□ -2.02
SDH6YDR379C-A MET4P32389 672 aa2.43□□□□□ -2.02
SDH6YDR379C-A RER2P35196 286 aa2.43□□□□□ -2.02
SDH6YDR379C-A YJL206CP39529 758 aa2.43□□□□□ -2.02
SDH6YDR379C-A YEL020CP39994 560 aa2.43□□□□□ -2.02
SDH6YDR379C-A XBP1P40489 647 aa2.43□□□□□ -2.02
SDH6YDR379C-A YGL176CP46945 554 aa2.43□□□□□ -2.02
SDH6YDR379C-A GCR1P07261 785 aa2.42□□□□□ -2.02
SDH6YDR379C-A SFB2P53953 876 aa2.42□□□□□ -2.02
SDH6YDR379C-A RPN13O13563 156 aa2.41□□□□□ -2.02
SDH6YDR379C-A RPT1P33299 467 aaKnown RBP2.41□□□□□ -2.02
SDH6YDR379C-A YBR053CP38235 358 aa2.41□□□□□ -2.02
SDH6YDR379C-A YHL050CP38721 697 aa2.41□□□□□ -2.02
SDH6YDR379C-A YHR219WP38900 624 aa2.41□□□□□ -2.02
SDH6YDR379C-A NPP2P39997 493 aa2.41□□□□□ -2.02
SDH6YDR379C-A RAI1P53063 387 aaKnown RBP2.41□□□□□ -2.02
SDH6YDR379C-A YGR053CP53234 283 aa2.41□□□□□ -2.02
SDH6YDR379C-A SSL2Q00578 843 aa2.41□□□□□ -2.02
SDH6YDR379C-A OSW1Q08692 278 aa2.41□□□□□ -2.02
SDH6YDR379C-A TAF3Q12297 353 aa2.4□□□□□ -2.03
SDH6YDR379C-A SWM1Q12379 170 aa2.4□□□□□ -2.03
SDH6YDR379C-A ERG11P10614 530 aa2.39□□□□□ -2.03
SDH6YDR379C-A RPC82P32349 654 aa2.39□□□□□ -2.03
SDH6YDR379C-A SAH1P39954 449 aaKnown RBP2.39□□□□□ -2.03
SDH6YDR379C-A SGO1Q08490 590 aa2.39□□□□□ -2.03
SDH6YDR379C-A GEP3Q08622 556 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms