RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W SRP40P32583 406 aaPredicted RBP1.88□□□□□ -2.11
CFT1YDR301W VPS35P34110 944 aa1.88□□□□□ -2.11
CFT1YDR301W KSP1P38691 1029 aaKnown RBP1.88□□□□□ -2.11
CFT1YDR301W YER130CP39959 443 aa1.88□□□□□ -2.11
CFT1YDR301W NPP2P39997 493 aa1.88□□□□□ -2.11
CFT1YDR301W HUL5P53119 910 aa1.88□□□□□ -2.11
CFT1YDR301W ESBP6P53918 673 aa1.88□□□□□ -2.11
CFT1YDR301W LCD1Q04377 747 aa1.88□□□□□ -2.11
CFT1YDR301W YPL277CQ08989 487 aa1.88□□□□□ -2.11
CFT1YDR301W MED1Q12321 566 aa1.88□□□□□ -2.11
CFT1YDR301W RPS3P05750 240 aaKnown RBP1.88□□□□□ -2.11
CFT1YDR301W SES1P07284 462 aaKnown RBP1.88□□□□□ -2.11
CFT1YDR301W BCS1P32839 456 aa1.88□□□□□ -2.11
CFT1YDR301W RPT1P33299 467 aaKnown RBP1.88□□□□□ -2.11
CFT1YDR301W IXR1P33417 597 aa1.88□□□□□ -2.11
CFT1YDR301W GPT2P36148 743 aa1.88□□□□□ -2.11
CFT1YDR301W ADE17P38009 592 aaKnown RBP1.88□□□□□ -2.11
CFT1YDR301W YBL036CP38197 257 aa1.88□□□□□ -2.11
CFT1YDR301W SAF1P38352 637 aa1.88□□□□□ -2.11
CFT1YDR301W RRM3P38766 723 aa1.88□□□□□ -2.11
CFT1YDR301W DAS1P47005 663 aa1.88□□□□□ -2.11
CFT1YDR301W VPS53P47061 822 aa1.88□□□□□ -2.11
CFT1YDR301W ALF1P53904 254 aa1.88□□□□□ -2.11
CFT1YDR301W DUS4Q06063 367 aa1.88□□□□□ -2.11
CFT1YDR301W PLP2Q12017 286 aa1.88□□□□□ -2.11
CFT1YDR301W RGP1P16664 663 aa1.88□□□□□ -2.11
CFT1YDR301W EST1P17214 699 aaPredicted RBP1.88□□□□□ -2.11
CFT1YDR301W HCA4P20448 770 aaKnown RBP1.88□□□□□ -2.11
CFT1YDR301W ADE2P21264 571 aaKnown RBP1.88□□□□□ -2.11
CFT1YDR301W TMT1P32643 299 aa1.88□□□□□ -2.11
CFT1YDR301W RAD54P32863 898 aa1.88□□□□□ -2.11
CFT1YDR301W PTC3P34221 468 aaKnown RBP1.88□□□□□ -2.11
CFT1YDR301W PSY4P38193 441 aa1.88□□□□□ -2.11
CFT1YDR301W REG2P38232 338 aa1.88□□□□□ -2.11
CFT1YDR301W UBP5P39944 805 aa1.88□□□□□ -2.11
CFT1YDR301W NNF1P47149 201 aa1.88□□□□□ -2.11
CFT1YDR301W ATH1P48016 1211 aa1.88□□□□□ -2.11
CFT1YDR301W PUS2P53167 370 aa1.88□□□□□ -2.11
CFT1YDR301W JIP4Q03361 876 aa1.88□□□□□ -2.11
CFT1YDR301W GIS4Q04233 774 aa1.88□□□□□ -2.11
CFT1YDR301W SMC5Q08204 1093 aa1.88□□□□□ -2.11
CFT1YDR301W APC11Q12157 165 aa1.88□□□□□ -2.11
CFT1YDR301W SUT2Q12286 268 aa1.88□□□□□ -2.11
CFT1YDR301W HIF1Q12373 385 aa1.88□□□□□ -2.11
CFT1YDR301W POL3P15436 1097 aa1.87□□□□□ -2.11
CFT1YDR301W ACE2P21192 770 aa1.87□□□□□ -2.11
CFT1YDR301W GSY1P23337 708 aa1.87□□□□□ -2.11
CFT1YDR301W APL1P27351 700 aa1.87□□□□□ -2.11
CFT1YDR301W COS5P47187 383 aa1.87□□□□□ -2.11
CFT1YDR301W HST2P53686 357 aa1.87□□□□□ -2.11
CFT1YDR301W YDL057WQ07379 328 aa1.87□□□□□ -2.11
CFT1YDR301W IES4Q08561 116 aa1.87□□□□□ -2.11
CFT1YDR301W FAL1Q12099 399 aaKnown RBP1.87□□□□□ -2.11
CFT1YDR301W NAT1P12945 854 aaKnown RBP1.87□□□□□ -2.11
CFT1YDR301W RPC53P25441 422 aa1.87□□□□□ -2.11
CFT1YDR301W KTR2P33550 425 aa1.87□□□□□ -2.11
CFT1YDR301W KDX1P36005 433 aa1.87□□□□□ -2.11
CFT1YDR301W MRPL10P36520 322 aa1.87□□□□□ -2.11
CFT1YDR301W PGM2P37012 569 aaKnown RBP1.87□□□□□ -2.11
CFT1YDR301W MRX3P38172 270 aa1.87□□□□□ -2.11
CFT1YDR301W BIM1P40013 344 aa1.87□□□□□ -2.11
CFT1YDR301W OSW7P43611 510 aa1.87□□□□□ -2.11
CFT1YDR301W NCS2P53923 493 aaPredicted RBP1.87□□□□□ -2.11
CFT1YDR301W ARK1P53974 638 aa1.87□□□□□ -2.11
CFT1YDR301W PEX29Q03370 554 aa1.87□□□□□ -2.11
CFT1YDR301W GFD1Q04839 188 aaKnown RBP1.87□□□□□ -2.11
CFT1YDR301W ADY4Q05955 493 aa1.87□□□□□ -2.11
CFT1YDR301W TFB4Q12004 338 aa1.87□□□□□ -2.11
CFT1YDR301W ILV1P00927 576 aaKnown RBP1.87□□□□□ -2.11
CFT1YDR301W PFK1P16861 987 aaKnown RBP1.87□□□□□ -2.11
CFT1YDR301W FUB1P25659 250 aa1.87□□□□□ -2.11
CFT1YDR301W PET10P36139 283 aa1.87□□□□□ -2.11
CFT1YDR301W LCB2P40970 561 aa1.87□□□□□ -2.11
CFT1YDR301W YGR237CP50089 785 aa1.87□□□□□ -2.11
CFT1YDR301W NBP1P52919 319 aaPredicted RBP1.87□□□□□ -2.11
CFT1YDR301W YGL081WP53156 320 aa1.87□□□□□ -2.11
CFT1YDR301W SDA1P53313 767 aaKnown RBP1.87□□□□□ -2.11
CFT1YDR301W WAR1Q03631 944 aa1.87□□□□□ -2.11
CFT1YDR301W AIM33Q04516 312 aa1.87□□□□□ -2.11
CFT1YDR301W HMI1Q12039 706 aa1.87□□□□□ -2.11
CFT1YDR301W GFA1P14742 717 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W SEC23P15303 768 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W GLN3P18494 730 aa1.86□□□□□ -2.11
CFT1YDR301W COX11P19516 300 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W STE11P23561 717 aa1.86□□□□□ -2.11
CFT1YDR301W CYS3P31373 394 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W SEC21P32074 935 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W GRS1P38088 690 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W STB5P38699 743 aa1.86□□□□□ -2.11
CFT1YDR301W YHR054CP38780 354 aa1.86□□□□□ -2.11
CFT1YDR301W PMC1P38929 1173 aaPredicted RBP1.86□□□□□ -2.11
CFT1YDR301W YAP5P40574 245 aa1.86□□□□□ -2.11
CFT1YDR301W HXT8P40886 569 aa1.86□□□□□ -2.11
CFT1YDR301W YFL034WP43564 1073 aa1.86□□□□□ -2.11
CFT1YDR301W HFM1P51979 1187 aa1.86□□□□□ -2.11
CFT1YDR301W YGR273CP53329 174 aa1.86□□□□□ -2.11
CFT1YDR301W RTT102P53330 157 aa1.86□□□□□ -2.11
CFT1YDR301W DAK1P54838 584 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W SYH1Q02875 849 aaKnown RBP1.86□□□□□ -2.11
CFT1YDR301W SLD5Q03406 294 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms