RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	YPL066W	Q12194	479 aa		3.15	□□□□□ -1.91
CSN9	YDR179C	CLN2	P20438	545 aa		3.14	□□□□□ -1.91
CSN9	YDR179C	HRR25	P29295	494 aa	Known RBP	3.14	□□□□□ -1.91
CSN9	YDR179C	MOT2	P34909	587 aa	Known RBP	3.14	□□□□□ -1.91
CSN9	YDR179C	SAH1	P39954	449 aa	Known RBP	3.14	□□□□□ -1.91
CSN9	YDR179C	YGR053C	P53234	283 aa		3.14	□□□□□ -1.91
CSN9	YDR179C	XYL2	Q07993	356 aa		3.14	□□□□□ -1.91
CSN9	YDR179C	NPC2	Q12408	173 aa		3.14	□□□□□ -1.91
CSN9	YDR179C	KCS1	Q12494	1050 aa		3.14	□□□□□ -1.91
CSN9	YDR179C	SRP101	P32916	621 aa		3.13	□□□□□ -1.91
CSN9	YDR179C	YKR078W	P36158	585 aa	Known RBP	3.13	□□□□□ -1.91
CSN9	YDR179C	SNM1	P40993	198 aa		3.13	□□□□□ -1.91
CSN9	YDR179C	UBA2	P52488	636 aa		3.13	□□□□□ -1.91
CSN9	YDR179C	NCS6	P53088	359 aa		3.13	□□□□□ -1.91
CSN9	YDR179C	HRQ1	Q05549	1077 aa		3.13	□□□□□ -1.91
CSN9	YDR179C	SBA1	P28707	216 aa	Known RBP	3.12	□□□□□ -1.91
CSN9	YDR179C	EFT1	P32324	842 aa	Known RBP	3.12	□□□□□ -1.91
CSN9	YDR179C	YKL151C	P36059	337 aa		3.12	□□□□□ -1.91
CSN9	YDR179C	KTR4	P38131	464 aa		3.12	□□□□□ -1.91
CSN9	YDR179C	MOH1	P38191	138 aa		3.12	□□□□□ -1.91
CSN9	YDR179C	GIC1	P38785	314 aa		3.12	□□□□□ -1.91
CSN9	YDR179C	YLR225C	Q05948	407 aa	Known RBP	3.12	□□□□□ -1.91
CSN9	YDR179C	PPM2	Q08282	695 aa		3.12	□□□□□ -1.91
CSN9	YDR179C	AGP1	P25376	633 aa		3.11	□□□□□ -1.91
CSN9	YDR179C	CDC12	P32468	407 aa	Known RBP	3.11	□□□□□ -1.91
CSN9	YDR179C	GYP7	P48365	746 aa		3.11	□□□□□ -1.91
CSN9	YDR179C	TIM44	Q01852	431 aa		3.11	□□□□□ -1.91
CSN9	YDR179C	SVF1	Q05515	481 aa		3.11	□□□□□ -1.91
CSN9	YDR179C	RAI1	P53063	387 aa	Known RBP	3.1	□□□□□ -1.91
CSN9	YDR179C	TPO2	P53283	614 aa		3.1	□□□□□ -1.91
CSN9	YDR179C	GDE1	Q02979	1223 aa		3.1	□□□□□ -1.91
CSN9	YDR179C	YPR196W	Q06595	470 aa		3.1	□□□□□ -1.91
CSN9	YDR179C	TRP4	P07285	380 aa	Predicted RBP	3.09	□□□□□ -1.91
CSN9	YDR179C	SED4	P25365	1065 aa		3.09	□□□□□ -1.91
CSN9	YDR179C	KAR4	P25583	335 aa		3.09	□□□□□ -1.91
CSN9	YDR179C	YER158C	P40095	573 aa		3.09	□□□□□ -1.91
CSN9	YDR179C	STU2	P46675	888 aa		3.09	□□□□□ -1.91
CSN9	YDR179C	VPS30	Q02948	557 aa		3.09	□□□□□ -1.91
CSN9	YDR179C	SHE9	Q04172	456 aa		3.09	□□□□□ -1.91
CSN9	YDR179C	OMS1	Q06668	471 aa		3.09	□□□□□ -1.91
CSN9	YDR179C	FAL1	Q12099	399 aa	Known RBP	3.09	□□□□□ -1.91
CSN9	YDR179C	CAD1	P24813	409 aa	Known RBP	3.08	□□□□□ -1.92
CSN9	YDR179C	CDC48	P25694	835 aa	Known RBP	3.08	□□□□□ -1.92
CSN9	YDR179C	SUL1	P38359	859 aa		3.08	□□□□□ -1.92
CSN9	YDR179C	MAD1	P40957	749 aa		3.08	□□□□□ -1.92
CSN9	YDR179C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
CSN9	YDR179C	FAA4	P47912	694 aa	Known RBP	3.08	□□□□□ -1.92
CSN9	YDR179C	RNT1	Q02555	471 aa		3.08	□□□□□ -1.92
CSN9	YDR179C	DUS3	Q06053	668 aa	Known RBP	3.08	□□□□□ -1.92
CSN9	YDR179C	YOL073C	Q08232	322 aa		3.08	□□□□□ -1.92
CSN9	YDR179C	UPC2	Q12151	913 aa		3.08	□□□□□ -1.92
CSN9	YDR179C	ACF2	Q12168	779 aa		3.08	□□□□□ -1.92
CSN9	YDR179C	ADE8	P04161	214 aa		3.07	□□□□□ -1.92
CSN9	YDR179C	ERG4	P25340	473 aa		3.07	□□□□□ -1.92
CSN9	YDR179C	PPH3	P32345	308 aa		3.07	□□□□□ -1.92
CSN9	YDR179C	ABD1	P32783	436 aa	Predicted RBP	3.07	□□□□□ -1.92
CSN9	YDR179C	YBR238C	P38330	731 aa	Known RBP	3.07	□□□□□ -1.92
CSN9	YDR179C	VPS16	Q03308	798 aa		3.07	□□□□□ -1.92
CSN9	YDR179C	MCH5	Q08777	521 aa		3.07	□□□□□ -1.92
CSN9	YDR179C	MRP8	P35719	219 aa		3.06	□□□□□ -1.92
CSN9	YDR179C	CWC24	P53769	259 aa		3.06	□□□□□ -1.92
CSN9	YDR179C	SFB2	P53953	876 aa		3.06	□□□□□ -1.92
CSN9	YDR179C	YLR040C	Q07988	224 aa		3.06	□□□□□ -1.92
CSN9	YDR179C	PIN2	Q12057	282 aa		3.06	□□□□□ -1.92
CSN9	YDR179C	LAS17	Q12446	633 aa		3.06	□□□□□ -1.92
CSN9	YDR179C	PBY1	P38254	753 aa		3.05	□□□□□ -1.92
CSN9	YDR179C	TSL1	P38427	1098 aa	Known RBP	3.05	□□□□□ -1.92
CSN9	YDR179C	MBP1	P39678	833 aa		3.05	□□□□□ -1.92
CSN9	YDR179C	SIT1	P39980	628 aa		3.05	□□□□□ -1.92
CSN9	YDR179C	NPP2	P39997	493 aa		3.05	□□□□□ -1.92
CSN9	YDR179C	QRI1	P43123	477 aa	Known RBP	3.05	□□□□□ -1.92
CSN9	YDR179C	CCM1	P48237	864 aa	Predicted RBP	3.05	□□□□□ -1.92
CSN9	YDR179C	BUL1	P48524	976 aa		3.05	□□□□□ -1.92
CSN9	YDR179C	YKE2	P52553	114 aa		3.05	□□□□□ -1.92
CSN9	YDR179C	WHI4	Q07655	649 aa	Known RBP	3.05	□□□□□ -1.92
CSN9	YDR179C	NOT3	P06102	836 aa	Known RBP	3.04	□□□□□ -1.92
CSN9	YDR179C	PPR1	P07272	904 aa	Predicted RBP	3.04	□□□□□ -1.92
CSN9	YDR179C	PRP9	P19736	530 aa	Known RBP	3.04	□□□□□ -1.92
CSN9	YDR179C	STE14	P32584	239 aa		3.04	□□□□□ -1.92
CSN9	YDR179C	STE13	P33894	931 aa		3.04	□□□□□ -1.92
CSN9	YDR179C	VBA5	P36172	582 aa		3.04	□□□□□ -1.92
CSN9	YDR179C	DAS1	P47005	663 aa		3.04	□□□□□ -1.92
CSN9	YDR179C	ESC2	Q06340	456 aa		3.04	□□□□□ -1.92
CSN9	YDR179C	YDR306C	Q06640	478 aa		3.04	□□□□□ -1.92
CSN9	YDR179C	MET3	P08536	511 aa		3.03	□□□□□ -1.92
CSN9	YDR179C	AAR2	P32357	355 aa	Predicted RBP	3.03	□□□□□ -1.92
CSN9	YDR179C	IRR1	P40541	1150 aa		3.03	□□□□□ -1.92
CSN9	YDR179C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
CSN9	YDR179C	TMN2	Q04562	672 aa		3.03	□□□□□ -1.92
CSN9	YDR179C	PEX19	Q07418	342 aa		3.03	□□□□□ -1.92
CSN9	YDR179C	OPI10	Q08202	246 aa		3.03	□□□□□ -1.92
CSN9	YDR179C	TRM11	Q12463	433 aa		3.03	□□□□□ -1.92
CSN9	YDR179C	ALG7	P07286	448 aa		3.02	□□□□□ -1.93
CSN9	YDR179C	FBP1	P09201	348 aa		3.02	□□□□□ -1.93
CSN9	YDR179C	RFA1	P22336	621 aa	Known RBP	3.02	□□□□□ -1.93
CSN9	YDR179C	CDC11	P32458	415 aa		3.02	□□□□□ -1.93
CSN9	YDR179C	SDP1	P40479	209 aa		3.02	□□□□□ -1.93
CSN9	YDR179C	HBT1	Q07653	1046 aa	Known RBP	3.02	□□□□□ -1.93
CSN9	YDR179C	IRC10	Q08118	586 aa		3.02	□□□□□ -1.93
CSN9	YDR179C	SWM1	Q12379	170 aa		3.02	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms