RNA–Protein interactions for RNA: YDR011W

SNQ2, Transcript of Plasma membrane ATP-binding cassette (ABC) transporter, yeast

Gene SNQ2, Length 4,506 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNQ2	YDR011W	MPH3	P0CE00	602 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	RAD53	P22216	821 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	AFG1	P32317	509 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	NTH1	P32356	751 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	EFM2	P38347	419 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	MAM33	P40513	266 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	INA22	P40576	216 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	RIP-Chip
SNQ2	YDR011W	RTA1	P53047	317 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	EEB1	Q02891	456 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
SNQ2	YDR011W	FEX2	Q08991	375 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	TFB4	Q12004	338 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	ICL2	Q12031	575 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	AIM7	Q12156	149 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	MDM20	Q12387	796 aa	Known RBP	3.12	□□□□□ -1.91
SNQ2	YDR011W	AVL9	Q12500	764 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	DCD1	P06773	312 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	SSA3	P09435	649 aa	Known RBP	3.12	□□□□□ -1.91
SNQ2	YDR011W	FAR1	P21268	830 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	PWP1	P21304	576 aa	Known RBP	3.12	□□□□□ -1.91
SNQ2	YDR011W	LOS1	P33418	1100 aa	Predicted RBP	3.12	□□□□□ -1.91
SNQ2	YDR011W	MCD4	P36051	919 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	UBP13	P38187	747 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	RFS1	P38234	210 aa	Known RBP	3.12	□□□□□ -1.91
SNQ2	YDR011W	ATG14	P38270	344 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	STN1	P38960	494 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	AIM21	P40563	679 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	THI12	P42883	340 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	THI5	P43534	340 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	EMP47	P43555	445 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	SAP155	P43612	1002 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	THI11	P47183	340 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	ALT2	P52892	507 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	MDR1	P53258	950 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	YNL050C	P53952	270 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	GYL1	Q04322	720 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	CRF1	Q04930	467 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	THI13	Q07748	340 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	KRE5	P22023	1365 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	RPS9A	O13516	197 aa	Known RBP	3.12	□□□□□ -1.91
SNQ2	YDR011W	RPP2A	P05319	106 aa	Known RBP	3.12	□□□□□ -1.91
SNQ2	YDR011W	ATP4	P05626	244 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	MRP7	P12687	371 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	PGI1	P12709	554 aa	Known RBP	3.12	□□□□□ -1.91
SNQ2	YDR011W	RPO26	P20435	155 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	PKC1	P24583	1151 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	GYP6	P32806	458 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	NPL4	P33755	580 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	BDF1	P35817	686 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	YKL133C	P36066	463 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	CTM1	P38818	585 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	PDS1	P40316	373 aa	Predicted RBP	3.12	□□□□□ -1.91
SNQ2	YDR011W	YNR029C	P53729	429 aa	Known RBP	3.12	□□□□□ -1.91
SNQ2	YDR011W	NAF1	P53919	492 aa	Known RBP	3.12	□□□□□ -1.91
SNQ2	YDR011W	TGL5	Q12043	749 aa		3.12	□□□□□ -1.91
SNQ2	YDR011W	RTC5	Q12108	567 aa	Known RBP	3.12	□□□□□ -1.91
SNQ2	YDR011W	PMS1	P14242	873 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	KAR9	P32526	644 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	COX13	P32799	129 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	NIC96	P34077	839 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	NUP133	P36161	1157 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	TDP1	P38319	544 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	MSR1	P38714	643 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	VPS45	P38932	577 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	DSE1	P40077	573 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	KHA1	P40309	873 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	YFL034W	P43564	1073 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	CSN9	Q03981	162 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	SYF1	Q04048	859 aa	Predicted RBP	3.11	□□□□□ -1.91
SNQ2	YDR011W	CBP2	P03874	630 aa	Predicted RBP	3.11	□□□□□ -1.91
SNQ2	YDR011W	GCD2	P12754	651 aa	Predicted RBP	3.11	□□□□□ -1.91
SNQ2	YDR011W	GSY1	P23337	708 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	CLB2	P24869	491 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	SPB1	P25582	841 aa	Predicted RBP	3.11	□□□□□ -1.91
SNQ2	YDR011W	ICL1	P28240	557 aa	Predicted RBP	3.11	□□□□□ -1.91
SNQ2	YDR011W	AFG2	P32794	780 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	DUR3	P33413	735 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	DID4	P36108	232 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	MET1	P36150	593 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	SEC9	P40357	651 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	PRP43	P53131	767 aa	Known RBP	3.11	□□□□□ -1.91
SNQ2	YDR011W	CUL3	P53202	744 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	RMD1	Q03441	430 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	SEC10	Q06245	871 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	RRP6	Q12149	733 aa	Known RBP	3.11	□□□□□ -1.91
SNQ2	YDR011W	LSO2	Q3E772	92 aa	Known RBP	3.11	□□□□□ -1.91
SNQ2	YDR011W	YGL041W-A	P0C5N3	154 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	SSC1	P0CS90	654 aa	Known RBP	3.11	□□□□□ -1.91
SNQ2	YDR011W	PHO81	P17442	1178 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	SEC15	P22224	910 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	RPN12	P32496	274 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	XKS1	P42826	600 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	MRS2	Q01926	470 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	CWC21	Q03375	135 aa	Known RBP	3.11	□□□□□ -1.91
SNQ2	YDR011W	HPT1	Q04178	221 aa	Known RBP	3.11	□□□□□ -1.91
SNQ2	YDR011W	YLR297W	Q05899	129 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	PEX30	Q06169	523 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	SLP1	Q12232	587 aa		3.11	□□□□□ -1.91
SNQ2	YDR011W	SRN2	Q99176	213 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 129.7 ms