RNA–Protein interactions for RNA: YCR021C

HSP30, Transcript of Negative regulator of the H(+)-ATPase Pma1p, yeast

Gene HSP30, Length 999 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP30	YCR021C	SPR3	P41901	512 aa		4.59	□□□□□ -1.67
HSP30	YCR021C	CIR1	P42940	261 aa		4.59	□□□□□ -1.67
HSP30	YCR021C	CIT3	P43635	486 aa		4.59	□□□□□ -1.67
HSP30	YCR021C	SCS3	P53012	380 aa		4.59	□□□□□ -1.67
HSP30	YCR021C	VMS1	Q04311	632 aa	Known RBP	4.59	□□□□□ -1.67
HSP30	YCR021C	AIM33	Q04516	312 aa		4.59	□□□□□ -1.67
HSP30	YCR021C	DUS3	Q06053	668 aa	Known RBP	4.59	□□□□□ -1.67
HSP30	YCR021C	GET3	Q12154	354 aa	Known RBP	4.59	□□□□□ -1.67
HSP30	YCR021C	APC11	Q12157	165 aa		4.59	□□□□□ -1.67
HSP30	YCR021C	MLF3	P32047	452 aa		4.58	□□□□□ -1.68
HSP30	YCR021C	OCT1	P35999	772 aa		4.58	□□□□□ -1.68
HSP30	YCR021C	BDH2	P39713	417 aa		4.58	□□□□□ -1.68
HSP30	YCR021C	ULP2	P40537	1034 aa	Predicted RBP	4.58	□□□□□ -1.68
HSP30	YCR021C	SBE2	P42223	864 aa	Known RBP	4.58	□□□□□ -1.68
HSP30	YCR021C	LSB3	P43603	459 aa	Known RBP	4.58	□□□□□ -1.68
HSP30	YCR021C	FMS1	P50264	508 aa		4.58	□□□□□ -1.68
HSP30	YCR021C	YGL138C	P53122	345 aa		4.58	□□□□□ -1.68
HSP30	YCR021C	PIL1	P53252	339 aa	Known RBP	4.58	□□□□□ -1.68
HSP30	YCR021C	SSL2	Q00578	843 aa		4.58	□□□□□ -1.68
HSP30	YCR021C	TRS120	Q04183	1289 aa		4.58	□□□□□ -1.68
HSP30	YCR021C	EIS1	Q05050	843 aa	Known RBP	4.58	□□□□□ -1.68
HSP30	YCR021C	DUS4	Q06063	367 aa		4.58	□□□□□ -1.68
HSP30	YCR021C	HAP4	P14064	554 aa		4.57	□□□□□ -1.68
HSP30	YCR021C	RGP1	P16664	663 aa		4.57	□□□□□ -1.68
HSP30	YCR021C	MSP1	P28737	362 aa		4.57	□□□□□ -1.68
HSP30	YCR021C	MOT2	P34909	587 aa	Known RBP	4.57	□□□□□ -1.68
HSP30	YCR021C	UBP11	P36026	717 aa		4.57	□□□□□ -1.68
HSP30	YCR021C	CAB3	P36076	571 aa		4.57	□□□□□ -1.68
HSP30	YCR021C	VPS24	P36095	224 aa	Known RBP	4.57	□□□□□ -1.68
HSP30	YCR021C	SUL1	P38359	859 aa		4.57	□□□□□ -1.68
HSP30	YCR021C	PAN5	P38787	379 aa		4.57	□□□□□ -1.68
HSP30	YCR021C	YTA6	P40328	754 aa		4.57	□□□□□ -1.68
HSP30	YCR021C	FYV10	P40492	516 aa		4.57	□□□□□ -1.68
HSP30	YCR021C	RRT6	P53117	311 aa	Predicted RBP	4.57	□□□□□ -1.68
HSP30	YCR021C	ADY4	Q05955	493 aa		4.57	□□□□□ -1.68
HSP30	YCR021C	WHI4	Q07655	649 aa	Known RBP	4.57	□□□□□ -1.68
HSP30	YCR021C	TRS33	Q99394	268 aa		4.57	□□□□□ -1.68
HSP30	YCR021C	TUF1	P02992	437 aa	Known RBP	4.56	□□□□□ -1.68
HSP30	YCR021C	RPP1A	P05318	106 aa	Predicted RBP	4.56	□□□□□ -1.68
HSP30	YCR021C	CLC1	P17891	233 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	CBP3	P21560	335 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	SRP40	P32583	406 aa	Predicted RBP	4.56	□□□□□ -1.68
HSP30	YCR021C	UGA4	P32837	571 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	MCD4	P36051	919 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	APE3	P37302	537 aa	Known RBP	4.56	□□□□□ -1.68
HSP30	YCR021C	ERG7	P38604	731 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	STT3	P39007	718 aa	Known RBP	4.56	□□□□□ -1.68
HSP30	YCR021C	GAA1	P39012	614 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	RVS167	P39743	482 aa	Known RBP	4.56	□□□□□ -1.68
HSP30	YCR021C	ALG2	P43636	503 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	CCT8	P47079	568 aa	Known RBP	4.56	□□□□□ -1.68
HSP30	YCR021C	SOL4	P53315	255 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	DIP5	P53388	608 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	DSE4	P53753	1117 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	DUS1	P53759	423 aa	Known RBP	4.56	□□□□□ -1.68
HSP30	YCR021C	EAF7	P53911	425 aa	Known RBP	4.56	□□□□□ -1.68
HSP30	YCR021C	ORC4	P54791	529 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	GDE1	Q02979	1223 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	SLD5	Q03406	294 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	RBA50	Q04418	439 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	VIP1	Q06685	1146 aa	Known RBP	4.56	□□□□□ -1.68
HSP30	YCR021C	PSR2	Q07949	397 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	PSK2	Q08217	1101 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	CFT2	Q12102	859 aa	Predicted RBP	4.56	□□□□□ -1.68
HSP30	YCR021C	LSP1	Q12230	341 aa	Known RBP	4.56	□□□□□ -1.68
HSP30	YCR021C	ARP6	Q12509	438 aa		4.56	□□□□□ -1.68
HSP30	YCR021C	ILV1	P00927	576 aa	Known RBP	4.55	□□□□□ -1.68
HSP30	YCR021C	HXK1	P04806	485 aa	Known RBP	4.55	□□□□□ -1.68
HSP30	YCR021C	GPA1	P08539	472 aa		4.55	□□□□□ -1.68
HSP30	YCR021C	RPL8A	P17076	256 aa	Known RBP	4.55	□□□□□ -1.68
HSP30	YCR021C	KNS1	P32350	737 aa	Predicted RBP	4.55	□□□□□ -1.68
HSP30	YCR021C	TTI1	P36097	1038 aa		4.55	□□□□□ -1.68
HSP30	YCR021C	PET10	P36139	283 aa		4.55	□□□□□ -1.68
HSP30	YCR021C	MCX1	P38323	520 aa	Predicted RBP	4.55	□□□□□ -1.68
HSP30	YCR021C	MSC7	P38694	644 aa		4.55	□□□□□ -1.68
HSP30	YCR021C	TOM71	P38825	639 aa	Known RBP	4.55	□□□□□ -1.68
HSP30	YCR021C	SKN7	P38889	622 aa		4.55	□□□□□ -1.68
HSP30	YCR021C	SAD1	P43589	448 aa		4.55	□□□□□ -1.68
HSP30	YCR021C	YGR153W	P48238	217 aa		4.55	□□□□□ -1.68
HSP30	YCR021C	PEX14	P53112	341 aa		4.55	□□□□□ -1.68
HSP30	YCR021C	HST1	P53685	503 aa		4.55	□□□□□ -1.68
HSP30	YCR021C	YNR014W	P53719	212 aa		4.55	□□□□□ -1.68
HSP30	YCR021C	ALD6	P54115	500 aa	Known RBP	4.55	□□□□□ -1.68
HSP30	YCR021C	BUL2	Q03758	920 aa	Known RBP	4.55	□□□□□ -1.68
HSP30	YCR021C	TY1A-DR2	Q03964	440 aa	Known RBP	4.55	□□□□□ -1.68
HSP30	YCR021C	YMR321C	Q04898	105 aa		4.55	□□□□□ -1.68
HSP30	YCR021C	SPH1	Q06160	661 aa		4.55	□□□□□ -1.68
HSP30	YCR021C	YPL216W	Q08964	1102 aa		4.55	□□□□□ -1.68
HSP30	YCR021C	ERP3	Q12403	225 aa		4.55	□□□□□ -1.68
HSP30	YCR021C	YPR053C	Q6Q5F3	151 aa		4.55	□□□□□ -1.68
HSP30	YCR021C	VMA2	P16140	517 aa	Known RBP	4.54	□□□□□ -1.68
HSP30	YCR021C	PDC5	P16467	563 aa	Known RBP	4.54	□□□□□ -1.68
HSP30	YCR021C	ROX1	P25042	368 aa		4.54	□□□□□ -1.68
HSP30	YCR021C	PER1	P25625	357 aa		4.54	□□□□□ -1.68
HSP30	YCR021C	CDC60	P26637	1090 aa	Known RBP	4.54	□□□□□ -1.68
HSP30	YCR021C	EUG1	P32474	517 aa		4.54	□□□□□ -1.68
HSP30	YCR021C	MCR1	P36060	302 aa	Known RBP	4.54	□□□□□ -1.68
HSP30	YCR021C	TGL4	P36165	910 aa		4.54	□□□□□ -1.68
HSP30	YCR021C	REG2	P38232	338 aa		4.54	□□□□□ -1.68
HSP30	YCR021C	BSD2	P38356	321 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms