RNA–Protein interactions for RNA: YBR079C

RPG1, Transcript of eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene RPG1, Length 2,895 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPG1	YBR079C	PFK1	P16861	987 aa	Known RBP	4.59	□□□□□ -1.68
RPG1	YBR079C	RPL8A	P17076	256 aa	Known RBP	4.59	□□□□□ -1.68
RPG1	YBR079C	PRP4	P20053	465 aa	Known RBP	4.59	□□□□□ -1.68
RPG1	YBR079C	GAA1	P39012	614 aa		4.59	□□□□□ -1.68
RPG1	YBR079C	URB2	P47108	1174 aa		4.59	□□□□□ -1.68
RPG1	YBR079C	ENV11	P53246	860 aa		4.59	□□□□□ -1.68
RPG1	YBR079C	CPR6	P53691	371 aa	Known RBP	4.59	□□□□□ -1.68
RPG1	YBR079C	ACM1	Q08981	209 aa		4.59	□□□□□ -1.68
RPG1	YBR079C	RIB2	Q12362	591 aa	Known RBP	4.59	□□□□□ -1.68
RPG1	YBR079C	POL3	P15436	1097 aa		4.58	□□□□□ -1.68
RPG1	YBR079C	RET1	P22276	1149 aa	Known RBP	4.58	□□□□□ -1.68
RPG1	YBR079C	YKL050C	P35736	922 aa		4.58	□□□□□ -1.68
RPG1	YBR079C	SMX2	P40204	77 aa	Known RBP	4.58	□□□□□ -1.68
RPG1	YBR079C	SGM1	P47166	707 aa		4.58	□□□□□ -1.68
RPG1	YBR079C	RIM8	P53179	542 aa		4.58	□□□□□ -1.68
RPG1	YBR079C	YPL109C	Q02981	657 aa		4.58	□□□□□ -1.68
RPG1	YBR079C	GIR2	Q03768	265 aa	Predicted RBP	4.58	□□□□□ -1.68
RPG1	YBR079C	AIM41	Q12032	185 aa		4.58	□□□□□ -1.68
RPG1	YBR079C	TRP2	P00899	507 aa	Known RBP	4.58	□□□□□ -1.68
RPG1	YBR079C	KRS1	P15180	591 aa	Known RBP	4.58	□□□□□ -1.68
RPG1	YBR079C	GCD6	P32501	712 aa	Known RBP	4.58	□□□□□ -1.68
RPG1	YBR079C	YEL1	P34225	687 aa		4.58	□□□□□ -1.68
RPG1	YBR079C	MSN5	P52918	1224 aa		4.58	□□□□□ -1.68
RPG1	YBR079C	ATG1	P53104	897 aa		4.58	□□□□□ -1.68
RPG1	YBR079C	VIP1	Q06685	1146 aa	Known RBP	4.58	□□□□□ -1.68
RPG1	YBR079C	MPC54	Q08550	464 aa		4.58	□□□□□ -1.68
RPG1	YBR079C	SPO21	Q12411	609 aa		4.58	□□□□□ -1.68
RPG1	YBR079C	MAK16	P10962	306 aa	Predicted RBP	4.57	□□□□□ -1.68
RPG1	YBR079C	CKA2	P19454	339 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	GAL11	P19659	1081 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	SRM1	P21827	482 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	PRE8	P23639	250 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	SMY1	P32364	656 aa	Known RBP	4.57	□□□□□ -1.68
RPG1	YBR079C	ECM2	P38241	364 aa	Known RBP	4.57	□□□□□ -1.68
RPG1	YBR079C	UBP9	P39967	754 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	LCP5	P40079	357 aa	Predicted RBP	4.57	□□□□□ -1.68
RPG1	YBR079C	UTP22	P53254	1237 aa	Predicted RBP	4.57	□□□□□ -1.68
RPG1	YBR079C	DIP5	P53388	608 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	BUL2	Q03758	920 aa	Known RBP	4.57	□□□□□ -1.68
RPG1	YBR079C	VAN1	P23642	535 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	ILV6	P25605	309 aa	Known RBP	4.57	□□□□□ -1.68
RPG1	YBR079C	KTR2	P33550	425 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	MAP2	P38174	421 aa	Known RBP	4.57	□□□□□ -1.68
RPG1	YBR079C	YBP1	P38315	674 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	SUL1	P38359	859 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	VPS45	P38932	577 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	SAP185	P40856	1058 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	PXA1	P41909	870 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	YJR039W	P47107	1121 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	YGR021W	P53212	290 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	JJJ1	P53863	590 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	SEC5	P89102	971 aa		4.57	□□□□□ -1.68
RPG1	YBR079C	YML082W	Q04533	649 aa	Known RBP	4.57	□□□□□ -1.68
RPG1	YBR079C	FAL1	Q12099	399 aa	Known RBP	4.57	□□□□□ -1.68
RPG1	YBR079C	PMD1	P32634	1753 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	RRN6	P32786	894 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	VPS35	P34110	944 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	HUL5	P53119	910 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	UTP6	Q02354	440 aa	Known RBP	4.56	□□□□□ -1.68
RPG1	YBR079C	YLR177W	Q06251	628 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	UTP4	Q06679	776 aa	Known RBP	4.56	□□□□□ -1.68
RPG1	YBR079C	FRA1	Q07825	749 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	TCO89	Q08921	799 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	PSF3	Q12146	194 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	SEY1	Q99287	776 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	YLR462W	O13556	202 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	BDF1	P35817	686 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	YHL049C	P38722	271 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	YEL075C	P39972	122 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	YER189W	P40104	122 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	SEC26	P41810	973 aa	Known RBP	4.56	□□□□□ -1.68
RPG1	YBR079C	YFL064C	P43540	174 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	GTR1	Q00582	310 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
RPG1	YBR079C	LCB5	Q06147	687 aa	Known RBP	4.56	□□□□□ -1.68
RPG1	YBR079C	YDL124W	Q07551	312 aa	Known RBP	4.56	□□□□□ -1.68
RPG1	YBR079C	RIO1	Q12196	484 aa	Known RBP	4.56	□□□□□ -1.68
RPG1	YBR079C	CLF1	Q12309	687 aa	Predicted RBP	4.56	□□□□□ -1.68
RPG1	YBR079C	SEC39	Q12745	709 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	YBL111C	Q3E7Y5	667 aa		4.56	□□□□□ -1.68
RPG1	YBR079C	ARD1	P07347	238 aa	Predicted RBP	4.55	□□□□□ -1.68
RPG1	YBR079C	SUP45	P12385	437 aa	Known RBP	4.55	□□□□□ -1.68
RPG1	YBR079C	SIT4	P20604	311 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	BAS1	P22035	811 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	CDC10	P25342	322 aa	Known RBP	4.55	□□□□□ -1.68
RPG1	YBR079C	YCR051W	P25631	222 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	PWP2	P25635	923 aa	Known RBP	4.55	□□□□□ -1.68
RPG1	YBR079C	MRF1	P30775	413 aa	Predicted RBP	4.55	□□□□□ -1.68
RPG1	YBR079C	SQT1	P35184	431 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
RPG1	YBR079C	RRT2	P38332	387 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	TIF5	P38431	405 aa	Known RBP	4.55	□□□□□ -1.68
RPG1	YBR079C	RCK2	P38623	610 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	HIS2	P38635	335 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	BRE2	P43132	505 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	UBX4	P54730	416 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	TFB2	Q02939	513 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	FAR8	Q05040	523 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	CMS1	Q07897	291 aa	Known RBP	4.55	□□□□□ -1.68
RPG1	YBR079C	MED1	Q12321	566 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms