RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C SNF3P10870 884 aa4.41□□□□□ -1.7
PTA1YAL043C SEC23P15303 768 aaKnown RBP4.41□□□□□ -1.7
PTA1YAL043C RAM1P22007 431 aa4.41□□□□□ -1.7
PTA1YAL043C RPC53P25441 422 aa4.41□□□□□ -1.7
PTA1YAL043C RRN6P32786 894 aa4.41□□□□□ -1.7
PTA1YAL043C PEX2P32800 271 aa4.41□□□□□ -1.7
PTA1YAL043C BYE1P36106 594 aa4.41□□□□□ -1.7
PTA1YAL043C PXL1P36166 706 aa4.41□□□□□ -1.7
PTA1YAL043C PBP2P38151 413 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
PTA1YAL043C BIM1P40013 344 aa4.41□□□□□ -1.7
PTA1YAL043C YJR079WP47126 109 aa4.41□□□□□ -1.7
PTA1YAL043C RTS3P53289 263 aa4.41□□□□□ -1.7
PTA1YAL043C DIP5P53388 608 aa4.41□□□□□ -1.7
PTA1YAL043C CSM3Q04659 317 aa4.41□□□□□ -1.7
PTA1YAL043C DSE3Q08729 430 aa4.41□□□□□ -1.7
PTA1YAL043C CEX1Q12453 761 aa4.41□□□□□ -1.7
PTA1YAL043C YPR015CQ12531 247 aa4.41□□□□□ -1.7
PTA1YAL043C PMD1P32634 1753 aa4.41□□□□□ -1.7
PTA1YAL043C CDC8P00572 216 aa4.41□□□□□ -1.7
PTA1YAL043C KRS1P15180 591 aaKnown RBP4.41□□□□□ -1.7
PTA1YAL043C KAR3P17119 729 aa4.41□□□□□ -1.7
PTA1YAL043C PRE10P21242 288 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7 RIP-Chip
PTA1YAL043C UGA2P38067 497 aa4.41□□□□□ -1.7
PTA1YAL043C PES4P39684 611 aa4.41□□□□□ -1.7
PTA1YAL043C ZPR1P53303 486 aaKnown RBP4.41□□□□□ -1.7
PTA1YAL043C FOL1P53848 824 aa4.41□□□□□ -1.7
PTA1YAL043C MDM1Q01846 1127 aa4.41□□□□□ -1.7
PTA1YAL043C YDR338CQ05497 695 aa4.41□□□□□ -1.7
PTA1YAL043C SIL1Q08199 421 aa4.41□□□□□ -1.7
PTA1YAL043C ACM1Q08981 209 aa4.41□□□□□ -1.7
PTA1YAL043C YEL076C-AP0CX16 216 aa4.4□□□□□ -1.7
PTA1YAL043C YLR464WP0CX17 216 aa4.4□□□□□ -1.7
PTA1YAL043C STE11P23561 717 aa4.4□□□□□ -1.7
PTA1YAL043C APL1P27351 700 aa4.4□□□□□ -1.7
PTA1YAL043C ICL1P28240 557 aaPredicted RBP4.4□□□□□ -1.7
PTA1YAL043C DSF2P38213 736 aa4.4□□□□□ -1.7
PTA1YAL043C YEL076CP39971 216 aa4.4□□□□□ -1.7
PTA1YAL043C VTC2P43585 828 aa4.4□□□□□ -1.7
PTA1YAL043C APL6P46682 809 aa4.4□□□□□ -1.7
PTA1YAL043C TOF1P53840 1238 aa4.4□□□□□ -1.7
PTA1YAL043C UBX4P54730 416 aa4.4□□□□□ -1.7
PTA1YAL043C UBX2Q04228 584 aa4.4□□□□□ -1.7
PTA1YAL043C PNP1Q05788 311 aa4.4□□□□□ -1.7
PTA1YAL043C UTP4Q06679 776 aaKnown RBP4.4□□□□□ -1.7
PTA1YAL043C YDL057WQ07379 328 aa4.4□□□□□ -1.7
PTA1YAL043C LAP2Q10740 671 aa4.4□□□□□ -1.7
PTA1YAL043C WRS1Q12109 432 aaKnown RBP4.4□□□□□ -1.7
PTA1YAL043C SMC6Q12749 1114 aa4.4□□□□□ -1.7
PTA1YAL043C MIP1P15801 1254 aa4.4□□□□□ -1.71
PTA1YAL043C RPL8AP17076 256 aaKnown RBP4.4□□□□□ -1.71
PTA1YAL043C ISY1P21374 235 aaPredicted RBP4.4□□□□□ -1.71
PTA1YAL043C YEL1P34225 687 aa4.4□□□□□ -1.71
PTA1YAL043C RRP1P35178 278 aaPredicted RBP4.4□□□□□ -1.71
PTA1YAL043C BCD1P38772 366 aa4.4□□□□□ -1.71
PTA1YAL043C DAK2P43550 591 aa4.4□□□□□ -1.71
PTA1YAL043C BRO1P48582 844 aa4.4□□□□□ -1.71
PTA1YAL043C CTR1P49573 406 aa4.4□□□□□ -1.71
PTA1YAL043C YDL124WQ07551 312 aaKnown RBP4.4□□□□□ -1.71
PTA1YAL043C APL5Q08951 932 aaKnown RBP4.4□□□□□ -1.71
PTA1YAL043C TOM1Q03280 3268 aa4.4□□□□□ -1.71
PTA1YAL043C ERG11P10614 530 aa4.39□□□□□ -1.71
PTA1YAL043C SUP45P12385 437 aaKnown RBP4.39□□□□□ -1.71
PTA1YAL043C PFK1P16861 987 aaKnown RBP4.39□□□□□ -1.71
PTA1YAL043C ARG1P22768 420 aa4.39□□□□□ -1.71
PTA1YAL043C AFG2P32794 780 aa4.39□□□□□ -1.71
PTA1YAL043C SEC8P32855 1065 aa4.39□□□□□ -1.71
PTA1YAL043C SMC2P38989 1170 aaKnown RBP4.39□□□□□ -1.71
PTA1YAL043C YNL320WP42840 284 aa4.39□□□□□ -1.71
PTA1YAL043C GYP1Q08484 637 aa4.39□□□□□ -1.71
PTA1YAL043C SSB1P11484 613 aaKnown RBP4.39□□□□□ -1.71
PTA1YAL043C VMA4P22203 233 aaKnown RBP4.39□□□□□ -1.71
PTA1YAL043C MCM3P24279 971 aaKnown RBP4.39□□□□□ -1.71
PTA1YAL043C YEL043WP32618 956 aa4.39□□□□□ -1.71
PTA1YAL043C YKU70P32807 602 aa4.39□□□□□ -1.71
PTA1YAL043C LAS1P36146 502 aaPredicted RBP4.39□□□□□ -1.71
PTA1YAL043C OLA1P38219 394 aaKnown RBP4.39□□□□□ -1.71
PTA1YAL043C SUL1P38359 859 aa4.39□□□□□ -1.71
PTA1YAL043C ERC1P38767 581 aa4.39□□□□□ -1.71
PTA1YAL043C UBP5P39944 805 aa4.39□□□□□ -1.71
PTA1YAL043C BUD16P39988 312 aa4.39□□□□□ -1.71
PTA1YAL043C PEA2P40091 420 aa4.39□□□□□ -1.71
PTA1YAL043C SSB2P40150 613 aaKnown RBP4.39□□□□□ -1.71
PTA1YAL043C TRS85P46944 698 aa4.39□□□□□ -1.71
PTA1YAL043C NBP1P52919 319 aaPredicted RBP4.39□□□□□ -1.71
PTA1YAL043C ATG1P53104 897 aa4.39□□□□□ -1.71
PTA1YAL043C SVF1Q05515 481 aa4.39□□□□□ -1.71
PTA1YAL043C YSH1Q06224 779 aaPredicted RBP4.39□□□□□ -1.71
PTA1YAL043C OPY2Q06810 360 aa4.39□□□□□ -1.71
PTA1YAL043C FLO11P08640 1367 aa4.38□□□□□ -1.71
PTA1YAL043C YKL050CP35736 922 aa4.38□□□□□ -1.71
PTA1YAL043C MUD2P36084 527 aaKnown RBP4.38□□□□□ -1.71
PTA1YAL043C VPS45P38932 577 aa4.38□□□□□ -1.71
PTA1YAL043C MKT1P40850 830 aaKnown RBP4.38□□□□□ -1.71
PTA1YAL043C NMD5P46970 1048 aa4.38□□□□□ -1.71
PTA1YAL043C RPC17P47076 161 aa4.38□□□□□ -1.71
PTA1YAL043C YGL039WP53183 348 aaKnown RBP4.38□□□□□ -1.71
PTA1YAL043C GIR2Q03768 265 aaPredicted RBP4.38□□□□□ -1.71
PTA1YAL043C YPR109WQ06104 294 aa4.38□□□□□ -1.71
PTA1YAL043C RMP1Q12530 201 aa4.38□□□□□ -1.71
PTA1YAL043C YOL087CQ99247 1116 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms