RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 RIPK4P57078 832 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 SMC6Q96SB8 1091 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 TCHPQ9BT92 498 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 CDK19Q9BWU1 502 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 SUDS3Q9H7L9 328 aaPredicted RBP8.28□□□□□ -1.08
COLCA1-205ENST00000620864 GNL3LQ9NVN8 582 aaKnown RBP8.28□□□□□ -1.08
COLCA1-205ENST00000620864 DHX29Q7Z478 1369 aaKnown RBP8.28□□□□□ -1.08
COLCA1-205ENST00000620864 ADGRL1O94910 1474 aa8.28□□□□□ -1.08
COLCA1-205ENST00000620864 KDM4AO75164 1064 aa8.27□□□□□ -1.08
COLCA1-205ENST00000620864 URI1O94763 535 aaPredicted RBP8.27□□□□□ -1.08
COLCA1-205ENST00000620864 ZNF428Q96B54 188 aa8.27□□□□□ -1.08
COLCA1-205ENST00000620864 ZNF608Q9ULD9 1512 aaPredicted RBP8.27□□□□□ -1.09
COLCA1-205ENST00000620864 FOSBP53539 338 aa8.27□□□□□ -1.09
COLCA1-205ENST00000620864 AMOTL2Q9Y2J4 779 aa8.27□□□□□ -1.09
COLCA1-205ENST00000620864 EBAG9O00559 213 aa8.27□□□□□ -1.09
COLCA1-205ENST00000620864 ARID4AP29374 1257 aaPredicted RBP8.27□□□□□ -1.09
COLCA1-205ENST00000620864 HS1BP3Q53T59 392 aa8.27□□□□□ -1.09
COLCA1-205ENST00000620864 SOGA3Q5TF21 947 aa8.27□□□□□ -1.09
COLCA1-205ENST00000620864 BCL2L13Q9BXK5 485 aa8.27□□□□□ -1.09
COLCA1-205ENST00000620864 MKRN1Q9UHC7 482 aaKnown RBP8.27□□□□□ -1.09
COLCA1-205ENST00000620864 LRPPRCP42704 1394 aaKnown RBP8.27□□□□□ -1.09
COLCA1-205ENST00000620864 PRPHP41219 470 aa8.27□□□□□ -1.09
COLCA1-205ENST00000620864 CADPS2Q86UW7 1296 aa8.27□□□□□ -1.09
COLCA1-205ENST00000620864 KRT28Q7Z3Y7 464 aa8.27□□□□□ -1.09
COLCA1-205ENST00000620864 PLEKHH2Q8IVE3 1493 aa8.27□□□□□ -1.09
COLCA1-205ENST00000620864 A0A1B0GUL7 405 aa8.27□□□□□ -1.09
COLCA1-205ENST00000620864 LARP1Q6PKG0 1096 aaKnown RBP8.27□□□□□ -1.09
COLCA1-205ENST00000620864 CCDC121Q6ZUS5 278 aa8.27□□□□□ -1.09
COLCA1-205ENST00000620864 LRRC45Q96CN5 670 aa8.27□□□□□ -1.09
COLCA1-205ENST00000620864 RASSF4Q9H2L5 321 aa8.27□□□□□ -1.09
COLCA1-205ENST00000620864 HOMER2Q9NSB8 354 aa8.27□□□□□ -1.09
COLCA1-205ENST00000620864 MAGI1Q96QZ7 1491 aaPredicted RBP8.27□□□□□ -1.09
COLCA1-205ENST00000620864 CCDC69A6NI79 296 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 ZBTB17Q13105 803 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 DDX19AQ9NUU7 478 aaKnown RBP8.26□□□□□ -1.09
COLCA1-205ENST00000620864 CCDC172P0C7W6 258 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 CCDC158Q5M9N0 1113 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 SH2B1Q9NRF2 756 aaPredicted RBP8.26□□□□□ -1.09
COLCA1-205ENST00000620864 TSPYL4Q9UJ04 414 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 MATR3P43243 847 aaKnown RBP eCLIP8.26□□□□□ -1.09
COLCA1-205ENST00000620864 CCDC30Q5VVM6 783 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 PIK3R5Q8WYR1 880 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 CCDC77Q9BR77 488 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 IKBKGQ9Y6K9 419 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 EXOC5O00471 708 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 APAF1O14727 1248 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 CLIP2Q9UDT6 1046 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 PLB1Q6P1J6 1458 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 CCT4P50991 539 aaKnown RBP8.26□□□□□ -1.09
COLCA1-205ENST00000620864 B4GALNT4Q76KP1 1039 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 PPFIBP2Q8ND30 876 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 TTC12Q9H892 705 aaPredicted RBP8.26□□□□□ -1.09
COLCA1-205ENST00000620864 UBE4AQ14139 1066 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 LMNTD2Q8IXW0 634 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 SMAP1Q8IYB5 467 aaPredicted RBP8.26□□□□□ -1.09
COLCA1-205ENST00000620864 IFT74Q96LB3 600 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 RASAL2Q9UJF2 1139 aa8.26□□□□□ -1.09
COLCA1-205ENST00000620864 CCDC178Q5BJE1 867 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.25□□□□□ -1.09
COLCA1-205ENST00000620864 CETN1Q12798 172 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 SNW1Q13573 536 aaKnown RBP8.25□□□□□ -1.09
COLCA1-205ENST00000620864 POTEDQ86YR6 584 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 RAB34Q9BZG1 259 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 GNAI2P04899 355 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 CEP128Q6ZU80 1094 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 CTCFLQ8NI51 663 aaPredicted RBP8.25□□□□□ -1.09
COLCA1-205ENST00000620864 SCLT1Q96NL6 688 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 KANK3Q6NY19 840 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 BLOC1S2Q6QNY1 142 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 CACNA2D4Q7Z3S7 1137 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 GOPCQ9HD26 462 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 EPRSP07814 1512 aaKnown RBP8.25□□□□□ -1.09
COLCA1-205ENST00000620864 CLCN1P35523 988 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 LACTBP83111 547 aaPredicted RBP8.25□□□□□ -1.09
COLCA1-205ENST00000620864 CFAP70Q5T0N1 1121 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 C10orf67Q8IYJ2 551 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 CACNA2D3Q8IZS8 1091 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 CCDC94Q9BW85 323 aaPredicted RBP8.25□□□□□ -1.09
COLCA1-205ENST00000620864 FAM83GA6ND36 823 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 OTUD6BQ8N6M0 293 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 TMOD2Q9NZR1 351 aa8.25□□□□□ -1.09
COLCA1-205ENST00000620864 SEPT14Q6ZU15 432 aa8.24□□□□□ -1.09
COLCA1-205ENST00000620864 GRIN2AQ12879 1464 aa8.24□□□□□ -1.09
COLCA1-205ENST00000620864 ST20-MTHFSA0A0A6YYL1 179 aa8.24□□□□□ -1.09
COLCA1-205ENST00000620864 STX1AQ16623 288 aa8.24□□□□□ -1.09
COLCA1-205ENST00000620864 RTEL1-TNFRSF6BF6WH68 1400 aa8.24□□□□□ -1.09
COLCA1-205ENST00000620864 ALDH3A1P30838 453 aa8.24□□□□□ -1.09
COLCA1-205ENST00000620864 CEP135Q66GS9 1140 aa8.24□□□□□ -1.09
COLCA1-205ENST00000620864 CNNM1Q9NRU3 951 aa8.24□□□□□ -1.09
COLCA1-205ENST00000620864 BICRAQ9NZM4 1560 aa8.24□□□□□ -1.09
COLCA1-205ENST00000620864 CCDC160A6NGH7 325 aa8.24□□□□□ -1.09
COLCA1-205ENST00000620864 FMNL3Q8IVF7 1028 aa8.24□□□□□ -1.09
COLCA1-205ENST00000620864 ZNF622Q969S3 477 aaKnown RBP eCLIP8.24□□□□□ -1.09
COLCA1-205ENST00000620864 MTHFSP49914 203 aa8.24□□□□□ -1.09
COLCA1-205ENST00000620864 HLTFQ14527 1009 aaKnown RBP eCLIP8.24□□□□□ -1.09
COLCA1-205ENST00000620864 RAB3IL1Q8TBN0 382 aa8.24□□□□□ -1.09
COLCA1-205ENST00000620864 VCX3BQ9H321 246 aa8.24□□□□□ -1.09
COLCA1-205ENST00000620864 STMN1P16949 149 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 MPRIPQ6WCQ1 1025 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 MAATS1Q7Z4T9 603 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms