RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Tubb5P99024 444 aaKnown RBP16.44■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Hdhd2Q3UGR5 259 aa16.44■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Trim27Q62158 513 aa16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Il1rapl2Q9ERS6 686 aa16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Atf7ipQ7TT18 1306 aa16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Gbp1Q01514 589 aa16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Ccdc162pQ0VG85 912 aa16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Pip4k2bQ80XI4 416 aa16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Bloc1s4Q8VED2 215 aa16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Traf3ip1Q149C2 625 aa16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Ddx10Q80Y44 875 aaKnown RBP16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Eif3bQ8JZQ9 803 aaKnown RBP16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Gtf3c5Q8R2T8 520 aa16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Uchl5Q9WUP7 329 aa16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Syt1P46096 421 aa16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Ccdc42Q5SV66 316 aa16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Aldh8a1Q8BH00 487 aa16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Ttc21bQ0HA38 1315 aa16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Fam135aQ6NS59 1506 aa16.43■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Elp1Q7TT37 1333 aaKnown RBP16.42■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Klhl30Q8C3F7 581 aa16.42■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Vgll3P85442 326 aa16.42■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Nup133Q8R0G9 1155 aa16.42■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Pdia3P27773 505 aaKnown RBP16.42■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Tbc1d2bQ3U0J8 965 aa16.42■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Nop53Q8BK35 484 aaKnown RBP16.42■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Rad50P70388 1312 aa16.42■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Clcn1Q64347 994 aa16.42■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Ehbp1Q69ZW3 1231 aa16.42■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Ell2Q3UKU1 639 aa16.41■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Fgd6Q69ZL1 1399 aa16.41■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Mnat1P51949 309 aa16.41■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Ift88Q61371 824 aa16.41■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Zkscan4Q5SZT6 480 aa16.41■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Zfp397Q7TNK4 527 aa16.41■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Vps37dQ810I0 261 aa16.41■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Chrna2Q91X60 512 aa16.41■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Homer1Q9Z2Y3 366 aa16.41■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Nfxl1E9Q8I7 918 aaKnown RBP16.4■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Tmx4Q8C0L0 335 aa16.4■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Nphp3Q7TNH6 1325 aa16.4■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Map7d1A2AJI0 846 aa16.4■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Metap2O08663 478 aaKnown RBP16.4■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Gzf1Q4VBD9 706 aa16.4■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Ltv1Q6NSQ7 470 aaKnown RBP16.4■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Hook3Q8BUK6 718 aa16.4■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Irx4Q9QY61 515 aa16.4■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Kcnh5Q920E3 988 aa16.4■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Slc7a3P70423 618 aa16.4■□□□□ 0.22
Pcdha8-201ENSMUST00000194038 Fam177a1Q8BR63 207 aa16.39■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Olr1Q9EQ09 363 aa16.39■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Setdb1O88974 1307 aa16.39■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Zfp853A0A1D5RM95 733 aa16.39■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Rassf4Q8CB96 322 aa16.39■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Nlrp3Q8R4B8 1033 aa16.38■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 FanclQ9CR14 375 aa16.38■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Slx4ipQ9D7Y9 413 aa16.38■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 E9QMW4 1145 aa16.38■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Top1Q04750 767 aaKnown RBP16.38■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Irf9Q61179 399 aa16.38■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Ccdc148Q6P5U8 527 aa16.38■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Caskin1Q6P9K8 1431 aa16.38■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Ddx27Q921N6 760 aaKnown RBP16.38■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Sycp2lA0A0M3U1B0 842 aa16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Speer4aF8VPX6 267 aa16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Nucb1Q02819 459 aaKnown RBP16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Gramd4Q8CB44 633 aa16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Ctnnbl1Q9CWL8 563 aaKnown RBP16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Esyt1Q3U7R1 1092 aaKnown RBP16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Gm14025A2AP89 1413 aa16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 NpcdF8VQB8 469 aa16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 EappQ5BU09 281 aa16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 U2af1l4Q8BGJ9 220 aa16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Egfem1Q8C088 590 aa16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Cdan1Q8CC12 1239 aa16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Tmem132aQ922P8 1018 aa16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Bcl11bQ99PV8 884 aa16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Yeats4Q9CR11 227 aaKnown RBP16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Hsf2bpQ9D4G2 338 aa16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Magi1Q6RHR9 1471 aa16.37■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Il4rP16382 810 aa16.36■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Gbp8Q2V6D6 525 aa16.36■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Gm21985Q6P6P5 1106 aa16.36■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Calcoco1Q8CGU1 691 aa16.36■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Rbm8a2A0A0N4SUH6 174 aa16.36■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Gnat3Q3V3I2 354 aa16.36■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Rbm8aQ9CWZ3 174 aa16.36■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Ppp1r10Q80W00 888 aaKnown RBP16.36■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Mlh3A0A1Y7VMP7 1443 aa16.36■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Gm28919A0A087WP35 240 aa16.36■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Cetn1P41209 172 aa16.36■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 SfpqQ8VIJ6 699 aaKnown RBP16.36■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Top2bQ64511 1612 aa16.35■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Mindy4Q3UQI9 744 aa16.35■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Soga3Q6NZL0 945 aa16.35■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Lman1Q9D0F3 517 aa16.35■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Fam114a1Q9D281 569 aa16.35■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Zfp42P22227 288 aa16.35■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Opa1P58281 960 aa16.35■□□□□ 0.21
Pcdha8-201ENSMUST00000194038 Cavin2Q63918 418 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms