RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Ubn2Q80WC1 1314 aa18.43■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Triml2E9PW10 424 aa18.42■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Kif23E9Q5G3 953 aa18.42■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Rtkn2Q14B46 604 aa18.42■□□□□ 0.54
Ercc1-201ENSMUST00000003645 NgdnQ9DB96 315 aaKnown RBP18.42■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Arap2Q8BZ05 1703 aa18.42■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Npy5rO70342 466 aa18.42■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Cyp19a1P28649 503 aa18.42■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Tlr7P58681 1050 aa18.42■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Trim34aQ99PP6 485 aa18.42■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Fam213aQ9CYH2 218 aa18.42■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Jdp2P97875 163 aa18.41■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Atp8b2P98199 1209 aa18.41■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Ezh2Q61188 746 aaKnown RBP18.41■□□□□ 0.54
Ercc1-201ENSMUST00000003645 OscarQ8VBT3 265 aa18.41■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Clca2Q8BG22 942 aa18.4■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Susd4Q8BH32 490 aa18.4■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Plch1Q4KWH5 1682 aa18.39■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Gnat3Q3V3I2 354 aa18.39■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Nlrp9bQ66X22 1003 aa18.39■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Cyp2c23E9Q5K4 494 aa18.38■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Dctn1O08788 1281 aa18.38■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Tlr8P58682 1032 aa18.38■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Zc3h12cQ5DTV4 884 aa18.38■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Tgfb1i1Q62219 461 aa18.38■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Rbm26Q6NZN0 1012 aaKnown RBP18.38■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Fam13aQ8BGI4 693 aa18.38■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Foxo4Q9WVH3 505 aa18.38■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Hs1bp3Q3TC93 395 aa18.37■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Gimap8Q75N62 688 aa18.37■□□□□ 0.53
Ercc1-201ENSMUST00000003645 HnrnpuQ8VEK3 800 aaKnown RBP18.37■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Tceal9Q9DD24 104 aa18.37■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Mapk8ip1Q9WVI9 707 aa18.37■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Col11a2Q64739 1736 aa18.37■□□□□ 0.53
Ercc1-201ENSMUST00000003645 InsrrQ9WTL4 1300 aa18.36■□□□□ 0.53
Ercc1-201ENSMUST00000003645 AU019823E9PUQ3 292 aa18.36■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Ier5O89113 308 aa18.36■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Ppp1r42Q8R1Z4 357 aa18.36■□□□□ 0.53
Ercc1-201ENSMUST00000003645 CpzQ8R4V4 654 aa18.36■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Tktl2Q9D4D4 627 aa18.36■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Casz1Q9CWL2 1761 aa18.36■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Sned1Q70E20 1403 aa18.35■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Stox1B2RQL2 990 aa18.35■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Cops6O88545 324 aa18.35■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Plcb3P51432 1234 aaKnown RBP18.35■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Trim27Q62158 513 aa18.35■□□□□ 0.53
Ercc1-201ENSMUST00000003645 GptQ8QZR5 496 aa18.35■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Duox1A2AQ92 1551 aa18.35■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Cwc27Q3TKY6 469 aa18.34■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Sart3Q9JLI8 962 aaKnown RBP18.34■□□□□ 0.53
Ercc1-201ENSMUST00000003645 CltaO08585 235 aa18.33■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Hsp90ab1P11499 724 aaKnown RBP18.33■□□□□ 0.53
Ercc1-201ENSMUST00000003645 CanxP35564 591 aaKnown RBP18.33■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Igflr1Q3U4N7 345 aa18.33■□□□□ 0.53
Ercc1-201ENSMUST00000003645 GpkowQ56A08 488 aa18.33■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Srgap3Q812A2 1099 aa18.33■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Ttc19Q8CC21 365 aa18.33■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Cluap1Q8R3P7 413 aa18.33■□□□□ 0.53
Ercc1-201ENSMUST00000003645 Ankrd31A0A140LI88 1765 aa18.32■□□□□ 0.52
Ercc1-201ENSMUST00000003645 ScaperF8VQ70 1398 aaKnown RBP18.32■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Msl1Q6PDM1 616 aa18.32■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Smc4Q8CG47 1286 aa18.32■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Mybbp1aQ7TPV4 1344 aaKnown RBP18.32■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Mmp8O70138 465 aa18.31■□□□□ 0.52
Ercc1-201ENSMUST00000003645 VgfQ0VGU4 617 aa18.31■□□□□ 0.52
Ercc1-201ENSMUST00000003645 1810065E05RikQ5NC41 235 aa18.31■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Wwc1Q5SXA9 1104 aa18.31■□□□□ 0.52
Ercc1-201ENSMUST00000003645 ErfeQ6PGN1 340 aa18.31■□□□□ 0.52
Ercc1-201ENSMUST00000003645 NexnQ7TPW1 607 aa18.31■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Smc5Q8CG46 1101 aaKnown RBP18.31■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Col23a1Q8K4G2 532 aa18.31■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Greb1lB9EJV3 1913 aa18.31■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Pde4bB1AWC9 736 aa18.3■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Ccdc85cE9Q6B2 420 aa18.3■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Zbtb38Q3LR78 1197 aa18.3■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Prom2Q3UUY6 835 aa18.3■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Arid3aQ62431 601 aa18.3■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Ttc14Q9CSP9 761 aa18.3■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Kiaa0232Q80U59 1396 aaKnown RBP18.3■□□□□ 0.52
Ercc1-201ENSMUST00000003645 SafbD3YXK2 937 aaKnown RBP18.3■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Cyp7a1Q64505 503 aa18.3■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Nphp1Q9QY53 687 aa18.3■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Foxo3Q9WVH4 672 aa18.3■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Prl3d2F6R3P9 224 aa18.29■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Adora1Q60612 326 aa18.29■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Atl3Q91YH5 541 aa18.29■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Armcx1Q9CX83 456 aa18.29■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Dbndd1Q9CZ00 160 aa18.29■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Slc4a10Q5DTL9 1118 aa18.28■□□□□ 0.52
Ercc1-201ENSMUST00000003645 Mcmdc2E9Q956 681 aa18.27■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Eif4g2Q62448 906 aaKnown RBP18.27■□□□□ 0.51
Ercc1-201ENSMUST00000003645 AtrnQ9WU60 1428 aa18.26■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Prdm11A2AGX3 565 aa18.26■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Trim34bJ3QNR8 485 aa18.26■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Slurp2P0DP59 97 aa18.26■□□□□ 0.51
Ercc1-201ENSMUST00000003645 SkilQ60665 675 aa18.26■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Tmem87bQ8BKU8 555 aa18.26■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Myh1Q5SX40 1942 aa18.25■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Pa2g4P50580 394 aaKnown RBP18.25■□□□□ 0.51
Ercc1-201ENSMUST00000003645 BcanQ61361 883 aa18.25■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms