RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR54, Length 86 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR54	snR54	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.29	□□□□□ -1.72	not detected
snR54	snR54	HFM1	P51979	1187 aa		4.29	□□□□□ -1.72
snR54	snR54	GTF1	P53260	183 aa	Predicted RBP	4.29	□□□□□ -1.72
snR54	snR54	GDE1	Q02979	1223 aa		4.29	□□□□□ -1.72
snR54	snR54	ATG13	Q06628	738 aa		4.29	□□□□□ -1.72
snR54	snR54	RKM4	Q12504	494 aa		4.29	□□□□□ -1.72
snR54	snR54	ABD1	P32783	436 aa	Predicted RBP	4.28	□□□□□ -1.72
snR54	snR54	GEM1	P39722	662 aa		4.28	□□□□□ -1.72
snR54	snR54	GCV2	P49095	1034 aa		4.28	□□□□□ -1.72
snR54	snR54	YGR053C	P53234	283 aa		4.28	□□□□□ -1.72
snR54	snR54	CLU1	Q03690	1277 aa	Known RBP	4.28	□□□□□ -1.72
snR54	snR54	SIZ1	Q04195	904 aa		4.28	□□□□□ -1.72
snR54	snR54	SPO20	Q04359	397 aa		4.28	□□□□□ -1.72
snR54	snR54	XYL2	Q07993	356 aa		4.28	□□□□□ -1.72
snR54	snR54	YLR358C	O13565	187 aa		4.27	□□□□□ -1.73
snR54	snR54	CDC6	P09119	513 aa		4.27	□□□□□ -1.73
snR54	snR54	CTS1	P29029	562 aa		4.27	□□□□□ -1.73
snR54	snR54	JIP5	Q06214	492 aa	Predicted RBP	4.27	□□□□□ -1.73
snR54	snR54	CDC20	P26309	610 aa		4.26	□□□□□ -1.73
snR54	snR54	YKL151C	P36059	337 aa		4.26	□□□□□ -1.73
snR54	snR54	VPS16	Q03308	798 aa		4.26	□□□□□ -1.73
snR54	snR54	MSC2	Q03455	724 aa		4.26	□□□□□ -1.73
snR54	snR54	YAP6	Q03935	383 aa		4.26	□□□□□ -1.73
snR54	snR54	HRQ1	Q05549	1077 aa		4.26	□□□□□ -1.73
snR54	snR54	GPB1	Q08886	897 aa		4.26	□□□□□ -1.73
snR54	snR54	SHM2	P37291	469 aa	Known RBP	4.25	□□□□□ -1.73
snR54	snR54	TAT2	P38967	592 aa		4.25	□□□□□ -1.73
snR54	snR54	RRT14	P40470	206 aa		4.25	□□□□□ -1.73
snR54	snR54	MAD1	P40957	749 aa		4.25	□□□□□ -1.73
snR54	snR54	MTC3	P53077	123 aa		4.25	□□□□□ -1.73
snR54	snR54	CWC24	P53769	259 aa		4.25	□□□□□ -1.73
snR54	snR54	TMA10	Q06177	86 aa		4.25	□□□□□ -1.73
snR54	snR54	RXT3	Q07458	294 aa		4.25	□□□□□ -1.73
snR54	snR54	ACK1	Q07622	623 aa	Predicted RBP	4.25	□□□□□ -1.73
snR54	snR54	FAL1	Q12099	399 aa	Known RBP	4.25	□□□□□ -1.73
snR54	snR54	CLN2	P20438	545 aa		4.24	□□□□□ -1.73
snR54	snR54	PRI2	P20457	528 aa		4.24	□□□□□ -1.73
snR54	snR54	EMC1	P25574	760 aa		4.24	□□□□□ -1.73
snR54	snR54	YKL069W	P36088	180 aa		4.24	□□□□□ -1.73
snR54	snR54	MBP1	P39678	833 aa		4.24	□□□□□ -1.73
snR54	snR54	PIN2	Q12057	282 aa		4.24	□□□□□ -1.73
snR54	snR54	DOM34	P33309	386 aa		4.23	□□□□□ -1.73
snR54	snR54	LST4	P34239	828 aa		4.23	□□□□□ -1.73
snR54	snR54	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
snR54	snR54	VPS62	P53285	467 aa		4.23	□□□□□ -1.73
snR54	snR54	HMI1	Q12039	706 aa		4.23	□□□□□ -1.73
snR54	snR54	THS1	P04801	734 aa	Known RBP	4.22	□□□□□ -1.73
snR54	snR54	ENA1	P13587	1091 aa		4.22	□□□□□ -1.73
snR54	snR54	ZRG8	P40021	1076 aa		4.22	□□□□□ -1.73
snR54	snR54	MND2	P40577	368 aa		4.22	□□□□□ -1.73
snR54	snR54	PBP1	P53297	722 aa	Known RBP	4.22	□□□□□ -1.73
snR54	snR54	ENA2	Q01896	1091 aa		4.22	□□□□□ -1.73
snR54	snR54	MDM38	Q08179	573 aa		4.22	□□□□□ -1.73
snR54	snR54	ENA5	Q12691	1091 aa		4.22	□□□□□ -1.73
snR54	snR54	AGP1	P25376	633 aa		4.21	□□□□□ -1.74
snR54	snR54	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
snR54	snR54	GIC1	P38785	314 aa		4.21	□□□□□ -1.74
snR54	snR54	YAP1801	P38856	637 aa		4.21	□□□□□ -1.74
snR54	snR54	SAH1	P39954	449 aa	Known RBP	4.21	□□□□□ -1.74
snR54	snR54	NPP2	P39997	493 aa		4.21	□□□□□ -1.74
snR54	snR54	YLR224W	Q05947	369 aa		4.21	□□□□□ -1.74
snR54	snR54	TPO1	Q07824	586 aa		4.21	□□□□□ -1.74
snR54	snR54	OPI10	Q08202	246 aa		4.21	□□□□□ -1.74
snR54	snR54	OSW2	Q12202	724 aa		4.21	□□□□□ -1.74
snR54	snR54	SBA1	P28707	216 aa	Known RBP	4.2	□□□□□ -1.74
snR54	snR54	SRP101	P32916	621 aa		4.2	□□□□□ -1.74
snR54	snR54	VAC8	P39968	578 aa		4.2	□□□□□ -1.74
snR54	snR54	MCM6	P53091	1017 aa	Known RBP	4.2	□□□□□ -1.74
snR54	snR54	ALD6	P54115	500 aa	Known RBP	4.2	□□□□□ -1.74
snR54	snR54	SRT1	Q03175	343 aa		4.2	□□□□□ -1.74
snR54	snR54	SVF1	Q05515	481 aa		4.2	□□□□□ -1.74
snR54	snR54	VBA5	P36172	582 aa		4.19	□□□□□ -1.74
snR54	snR54	POA1	P38218	177 aa		4.19	□□□□□ -1.74
snR54	snR54	ADY3	Q07732	790 aa		4.19	□□□□□ -1.74
snR54	snR54	TUB2	P02557	457 aa	Known RBP	4.18	□□□□□ -1.74
snR54	snR54	CDC12	P32468	407 aa	Known RBP	4.18	□□□□□ -1.74
snR54	snR54	ECM21	P38167	1117 aa	Known RBP	4.18	□□□□□ -1.74
snR54	snR54	SNF7	P39929	240 aa	Known RBP	4.18	□□□□□ -1.74
snR54	snR54	YGR012W	P53206	393 aa		4.18	□□□□□ -1.74
snR54	snR54	SFB2	P53953	876 aa		4.18	□□□□□ -1.74
snR54	snR54	DUS3	Q06053	668 aa	Known RBP	4.18	□□□□□ -1.74
snR54	snR54	CDA1	Q06702	301 aa		4.18	□□□□□ -1.74
snR54	snR54	NOP12	Q08208	459 aa	Known RBP	4.18	□□□□□ -1.74
snR54	snR54	YLL058W	Q12198	575 aa		4.18	□□□□□ -1.74
snR54	snR54	STE11	P23561	717 aa		4.17	□□□□□ -1.74
snR54	snR54	NAP1	P25293	417 aa	Known RBP	4.17	□□□□□ -1.74
snR54	snR54	HCM1	P25364	564 aa		4.17	□□□□□ -1.74
snR54	snR54	FUN30	P31380	1131 aa		4.17	□□□□□ -1.74
snR54	snR54	PLB1	P39105	664 aa		4.17	□□□□□ -1.74
snR54	snR54	MET12	P46151	657 aa		4.17	□□□□□ -1.74
snR54	snR54	MNN10	P50108	393 aa	Known RBP	4.17	□□□□□ -1.74
snR54	snR54	PHO23	P50947	330 aa		4.17	□□□□□ -1.74
snR54	snR54	SNU71	P53207	620 aa	Known RBP	4.16	□□□□□ -1.74
snR54	snR54	HIS5	P07172	385 aa		4.15	□□□□□ -1.75
snR54	snR54	SPE1	P08432	466 aa		4.15	□□□□□ -1.75
snR54	snR54	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
snR54	snR54	SRP1	Q02821	542 aa	Known RBP	4.15	□□□□□ -1.75
snR54	snR54	SHE9	Q04172	456 aa		4.15	□□□□□ -1.75
snR54	snR54	YDR306C	Q06640	478 aa		4.15	□□□□□ -1.75
snR54	snR54	WHI4	Q07655	649 aa	Known RBP	4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 71.6 ms