RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR38, Length 95 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR38	snR38	ENA1	P13587	1091 aa		0.79	□□□□□ -2.28
snR38	snR38	BIM1	P40013	344 aa		0.79	□□□□□ -2.28
snR38	snR38	ZRG8	P40021	1076 aa		0.79	□□□□□ -2.28
snR38	snR38	ATG32	P40458	529 aa		0.79	□□□□□ -2.28
snR38	snR38	BUL1	P48524	976 aa		0.79	□□□□□ -2.28
snR38	snR38	ENA2	Q01896	1091 aa		0.79	□□□□□ -2.28
snR38	snR38	RSC4	Q02206	625 aa		0.79	□□□□□ -2.28
snR38	snR38	CIR2	Q08822	631 aa		0.79	□□□□□ -2.28
snR38	snR38	YPL260W	Q08977	551 aa		0.79	□□□□□ -2.28
snR38	snR38	ENA5	Q12691	1091 aa		0.79	□□□□□ -2.28
snR38	snR38	RPN13	O13563	156 aa		0.78	□□□□□ -2.28
snR38	snR38	KAR4	P25583	335 aa		0.78	□□□□□ -2.28
snR38	snR38	DUR3	P33413	735 aa		0.78	□□□□□ -2.28
snR38	snR38	ADD66	P36040	267 aa		0.78	□□□□□ -2.28
snR38	snR38	HGH1	P48362	394 aa	Known RBP	0.78	□□□□□ -2.28
snR38	snR38	PSP2	P50109	593 aa	Known RBP	0.78	□□□□□ -2.28
snR38	snR38	UFD2	P54860	961 aa		0.78	□□□□□ -2.28
snR38	snR38	YPL068C	Q02749	293 aa		0.78	□□□□□ -2.28
snR38	snR38	ATG13	Q06628	738 aa		0.78	□□□□□ -2.28
snR38	snR38	ATG19	P35193	415 aa		0.77	□□□□□ -2.29
snR38	snR38	ENP2	P48234	707 aa	Known RBP	0.77	□□□□□ -2.29
snR38	snR38	DAM1	P53267	343 aa		0.77	□□□□□ -2.29
snR38	snR38	NOG1	Q02892	647 aa	Known RBP	0.77	□□□□□ -2.29
snR38	snR38	BSC2	Q05611	235 aa		0.77	□□□□□ -2.29
snR38	snR38	LAS17	Q12446	633 aa		0.77	□□□□□ -2.29
snR38	snR38	PTC5	Q12511	572 aa		0.77	□□□□□ -2.29
snR38	snR38	LSO1	Q3E827	93 aa		0.77	□□□□□ -2.29
snR38	snR38	FLP1	P03870	423 aa		0.76	□□□□□ -2.29
snR38	snR38	FUR4	P05316	633 aa	Known RBP	0.76	□□□□□ -2.29
snR38	snR38	MSH3	P25336	1018 aa		0.76	□□□□□ -2.29
snR38	snR38	XBP1	P40489	647 aa		0.76	□□□□□ -2.29
snR38	snR38	SCW10	Q04951	389 aa		0.76	□□□□□ -2.29
snR38	snR38	PNP1	Q05788	311 aa		0.76	□□□□□ -2.29
snR38	snR38	MET3	P08536	511 aa		0.75	□□□□□ -2.29
snR38	snR38	VPS34	P22543	875 aa		0.75	□□□□□ -2.29
snR38	snR38	PPS1	P38148	807 aa		0.75	□□□□□ -2.29
snR38	snR38	CCC2	P38995	1004 aa		0.75	□□□□□ -2.29
snR38	snR38	RRT14	P40470	206 aa		0.75	□□□□□ -2.29
snR38	snR38	YOR111W	Q99210	232 aa		0.75	□□□□□ -2.29
snR38	snR38	NCS6	P53088	359 aa		0.74	□□□□□ -2.29
snR38	snR38	PEX13	P80667	386 aa		0.74	□□□□□ -2.29
snR38	snR38	FRE5	Q08908	694 aa		0.74	□□□□□ -2.29
snR38	snR38	ACE2	P21192	770 aa		0.73	□□□□□ -2.29
snR38	snR38	SQT1	P35184	431 aa		0.73	□□□□□ -2.29
snR38	snR38	ZAP1	P47043	880 aa		0.73	□□□□□ -2.29
snR38	snR38	MON1	P53129	644 aa		0.73	□□□□□ -2.29
snR38	snR38	RIA1	P53893	1110 aa		0.73	□□□□□ -2.29
snR38	snR38	YNL011C	P53980	444 aa		0.73	□□□□□ -2.29
snR38	snR38	RAT1	Q02792	1006 aa	Known RBP	0.73	□□□□□ -2.29
snR38	snR38	CWC15	Q03772	175 aa	Known RBP	0.73	□□□□□ -2.29
snR38	snR38	SLK19	Q08581	821 aa	Known RBP	0.73	□□□□□ -2.29
snR38	snR38	PGK1	P00560	416 aa	Known RBP	0.72	□□□□□ -2.29
snR38	snR38	THS1	P04801	734 aa	Known RBP	0.72	□□□□□ -2.29
snR38	snR38	SPE1	P08432	466 aa		0.72	□□□□□ -2.29
snR38	snR38	LSB5	P25369	354 aa		0.72	□□□□□ -2.29
snR38	snR38	SDS24	P38314	527 aa		0.72	□□□□□ -2.29
snR38	snR38	PCL5	P38794	229 aa		0.72	□□□□□ -2.29
snR38	snR38	URM1	P40554	99 aa	Predicted RBP	0.72	□□□□□ -2.29
snR38	snR38	IRC8	P47046	822 aa		0.72	□□□□□ -2.29
snR38	snR38	RSM26	P47141	266 aa		0.72	□□□□□ -2.29
snR38	snR38	YGR012W	P53206	393 aa		0.72	□□□□□ -2.29
snR38	snR38	DLT1	Q04216	342 aa		0.72	□□□□□ -2.29
snR38	snR38	ERG11	P10614	530 aa		0.71	□□□□□ -2.3
snR38	snR38	ALG3	P38179	458 aa		0.71	□□□□□ -2.3
snR38	snR38	HRB1	P38922	454 aa	Known RBP RIP-Chip data	0.71	□□□□□ -2.3	not detected
snR38	snR38	YEL020C	P39994	560 aa		0.71	□□□□□ -2.3
snR38	snR38	ADY4	Q05955	493 aa		0.71	□□□□□ -2.3
snR38	snR38	EST2	Q06163	884 aa		0.71	□□□□□ -2.3
snR38	snR38	INP54	Q08227	384 aa	Known RBP	0.71	□□□□□ -2.3
snR38	snR38	HSF1	P10961	833 aa		0.7	□□□□□ -2.3
snR38	snR38	GCS1	P35197	352 aa		0.7	□□□□□ -2.3
snR38	snR38	RPN1	P38764	993 aa	Known RBP	0.7	□□□□□ -2.3
snR38	snR38	ELO3	P40319	345 aa		0.7	□□□□□ -2.3
snR38	snR38	MAF1	P41910	395 aa		0.7	□□□□□ -2.3
snR38	snR38	STP1	Q00947	519 aa		0.7	□□□□□ -2.3
snR38	snR38	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	0.7	□□□□□ -2.3	not detected
snR38	snR38	CRR1	Q05790	422 aa		0.7	□□□□□ -2.3
snR38	snR38	GEP3	Q08622	556 aa		0.7	□□□□□ -2.3
snR38	snR38	OSW1	Q08692	278 aa		0.7	□□□□□ -2.3
snR38	snR38	NDD1	Q08887	554 aa		0.7	□□□□□ -2.3
snR38	snR38	CAF20	P12962	161 aa	Known RBP	0.69	□□□□□ -2.3
snR38	snR38	BAS1	P22035	811 aa		0.69	□□□□□ -2.3
snR38	snR38	DMA1	P38823	416 aa		0.69	□□□□□ -2.3
snR38	snR38	PAC2	P39937	518 aa		0.69	□□□□□ -2.3
snR38	snR38	DAK2	P43550	591 aa		0.69	□□□□□ -2.3
snR38	snR38	SSL2	Q00578	843 aa		0.69	□□□□□ -2.3
snR38	snR38	KAR2	P16474	682 aa	Known RBP	0.68	□□□□□ -2.3
snR38	snR38	NUP1	P20676	1076 aa		0.68	□□□□□ -2.3
snR38	snR38	SED4	P25365	1065 aa		0.68	□□□□□ -2.3
snR38	snR38	AFG2	P32794	780 aa		0.68	□□□□□ -2.3
snR38	snR38	CBR1	P38626	284 aa	Known RBP	0.68	□□□□□ -2.3
snR38	snR38	YJL206C	P39529	758 aa		0.68	□□□□□ -2.3
snR38	snR38	YAT2	P40017	923 aa		0.68	□□□□□ -2.3
snR38	snR38	YCS4	Q06156	1176 aa		0.68	□□□□□ -2.3
snR38	snR38	OSW2	Q12202	724 aa		0.68	□□□□□ -2.3
snR38	snR38	TRM13	Q12383	476 aa		0.68	□□□□□ -2.3
snR38	snR38	UGA2	P38067	497 aa		0.67	□□□□□ -2.3
snR38	snR38	RDH54	P38086	958 aa		0.67	□□□□□ -2.3
snR38	snR38	RGD1	P38339	666 aa		0.67	□□□□□ -2.3
snR38	snR38	PEX28	P38848	579 aa		0.67	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms