RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W DBP2P24783 546 aaKnown RBP2.82□□□□□ -1.96
VPS16YPL045W PPH3P32345 308 aa2.82□□□□□ -1.96
VPS16YPL045W SPC29P33419 253 aa2.82□□□□□ -1.96
VPS16YPL045W YEL1P34225 687 aa2.82□□□□□ -1.96
VPS16YPL045W NEO1P40527 1151 aa2.82□□□□□ -1.96
VPS16YPL045W SPO74P45819 413 aa2.82□□□□□ -1.96
VPS16YPL045W DUS3Q06053 668 aaKnown RBP2.82□□□□□ -1.96
VPS16YPL045W SPP382Q06411 708 aaPredicted RBP2.82□□□□□ -1.96
VPS16YPL045W RAS1P01119 309 aa2.82□□□□□ -1.96
VPS16YPL045W AFR1P33304 620 aa2.82□□□□□ -1.96
VPS16YPL045W MTC2P34246 357 aa2.82□□□□□ -1.96
VPS16YPL045W ATG14P38270 344 aa2.82□□□□□ -1.96
VPS16YPL045W PNT1P38969 423 aa2.82□□□□□ -1.96
VPS16YPL045W PIP2P52960 996 aa2.82□□□□□ -1.96
VPS16YPL045W GUP1P53154 560 aa2.82□□□□□ -1.96
VPS16YPL045W UBX4P54730 416 aa2.82□□□□□ -1.96
VPS16YPL045W MEC3Q02574 474 aa2.82□□□□□ -1.96
VPS16YPL045W LCD1Q04377 747 aa2.82□□□□□ -1.96
VPS16YPL045W HSL1P34244 1518 aa2.81□□□□□ -1.96
VPS16YPL045W ADE8P04161 214 aa2.81□□□□□ -1.96
VPS16YPL045W GAL1P04385 528 aa2.81□□□□□ -1.96
VPS16YPL045W PGI1P12709 554 aaKnown RBP2.81□□□□□ -1.96
VPS16YPL045W PRP19P32523 503 aaKnown RBP2.81□□□□□ -1.96
VPS16YPL045W SCT1P32784 759 aa2.81□□□□□ -1.96
VPS16YPL045W HSP78P33416 811 aa2.81□□□□□ -1.96
VPS16YPL045W YKL222CP35995 705 aa2.81□□□□□ -1.96
VPS16YPL045W CKB2P38930 258 aa2.81□□□□□ -1.96
VPS16YPL045W PRK1P40494 810 aa2.81□□□□□ -1.96
VPS16YPL045W TY4A-JP47023 414 aa2.81□□□□□ -1.96
VPS16YPL045W YJR096WP47137 282 aa2.81□□□□□ -1.96
VPS16YPL045W MET14Q02196 202 aa2.81□□□□□ -1.96
VPS16YPL045W MTC5Q03897 1148 aa2.81□□□□□ -1.96
VPS16YPL045W COG4Q06096 861 aa2.81□□□□□ -1.96
VPS16YPL045W BRE1Q07457 700 aaKnown RBP2.81□□□□□ -1.96
VPS16YPL045W RPL11AP0C0W9 174 aaKnown RBP2.81□□□□□ -1.96
VPS16YPL045W YER152CP10356 443 aa2.81□□□□□ -1.96
VPS16YPL045W RET1P22276 1149 aaKnown RBP2.81□□□□□ -1.96
VPS16YPL045W TRZ1P36159 838 aaPredicted RBP2.81□□□□□ -1.96
VPS16YPL045W YRO2P38079 344 aa2.81□□□□□ -1.96
VPS16YPL045W ERT1P38140 529 aa2.81□□□□□ -1.96
VPS16YPL045W CAF16P43569 289 aa2.81□□□□□ -1.96
VPS16YPL045W GYP8P43570 497 aa2.81□□□□□ -1.96
VPS16YPL045W NAM8Q00539 523 aaKnown RBP2.81□□□□□ -1.96
VPS16YPL045W UBP2Q01476 1272 aa2.81□□□□□ -1.96
VPS16YPL045W LCB5Q06147 687 aaKnown RBP2.81□□□□□ -1.96
VPS16YPL045W RPL11BQ3E757 174 aaPredicted RBP2.81□□□□□ -1.96
VPS16YPL045W KOG1P38873 1557 aa2.81□□□□□ -1.96
VPS16YPL045W REI1P38344 393 aaPredicted RBP2.8□□□□□ -1.96
VPS16YPL045W PCM1P38628 557 aaKnown RBP2.8□□□□□ -1.96
VPS16YPL045W OSH7P38755 437 aa2.8□□□□□ -1.96
VPS16YPL045W YAR028WP39548 234 aa2.8□□□□□ -1.96
VPS16YPL045W OAF1P39720 1047 aaPredicted RBP2.8□□□□□ -1.96
VPS16YPL045W MXR1P40029 184 aa2.8□□□□□ -1.96
VPS16YPL045W VID27P40157 782 aa2.8□□□□□ -1.96
VPS16YPL045W TOK1P40310 691 aa2.8□□□□□ -1.96
VPS16YPL045W LEM3P42838 414 aa2.8□□□□□ -1.96
VPS16YPL045W DUG1P43616 481 aaKnown RBP2.8□□□□□ -1.96
VPS16YPL045W GCV1P48015 400 aa2.8□□□□□ -1.96
VPS16YPL045W SPC105P53148 917 aa2.8□□□□□ -1.96
VPS16YPL045W YGR283CP53336 341 aaPredicted RBP2.8□□□□□ -1.96
VPS16YPL045W RSC3Q06639 885 aa2.8□□□□□ -1.96
VPS16YPL045W LAP2Q10740 671 aa2.8□□□□□ -1.96
VPS16YPL045W YTM1Q12024 460 aaPredicted RBP2.8□□□□□ -1.96
VPS16YPL045W AEP2P22136 580 aa2.8□□□□□ -1.96
VPS16YPL045W NPP1P25353 742 aa2.8□□□□□ -1.96
VPS16YPL045W NFS1P25374 497 aa2.8□□□□□ -1.96
VPS16YPL045W REC104P33323 182 aa2.8□□□□□ -1.96
VPS16YPL045W NIT2P47016 307 aa2.8□□□□□ -1.96
VPS16YPL045W VPS53P47061 822 aa2.8□□□□□ -1.96
VPS16YPL045W PBP1P53297 722 aaKnown RBP2.8□□□□□ -1.96
VPS16YPL045W SRP1Q02821 542 aaKnown RBP2.8□□□□□ -1.96
VPS16YPL045W GUD1Q07729 489 aa2.8□□□□□ -1.96
VPS16YPL045W DNA2P38859 1522 aa2.79□□□□□ -1.96
VPS16YPL045W DIT1P21623 536 aa2.79□□□□□ -1.96
VPS16YPL045W FPS1P23900 669 aa2.79□□□□□ -1.96
VPS16YPL045W PTP2P29461 750 aa2.79□□□□□ -1.96
VPS16YPL045W CDC12P32468 407 aaKnown RBP2.79□□□□□ -1.96
VPS16YPL045W NIC96P34077 839 aa2.79□□□□□ -1.96
VPS16YPL045W STO1P34160 861 aaKnown RBP2.79□□□□□ -1.96
VPS16YPL045W MCD4P36051 919 aa2.79□□□□□ -1.96
VPS16YPL045W QNS1P38795 714 aaKnown RBP2.79□□□□□ -1.96
VPS16YPL045W RRP8P38961 392 aaKnown RBP2.79□□□□□ -1.96
VPS16YPL045W GPP2P40106 250 aaKnown RBP2.79□□□□□ -1.96
VPS16YPL045W AIM21P40563 679 aa2.79□□□□□ -1.96
VPS16YPL045W GZF3P42944 551 aaKnown RBP2.79□□□□□ -1.96
VPS16YPL045W ATP25Q03153 612 aa2.79□□□□□ -1.96
VPS16YPL045W YPL260WQ08977 551 aa2.79□□□□□ -1.96
VPS16YPL045W ALG6Q12001 544 aaKnown RBP2.79□□□□□ -1.96
VPS16YPL045W RRP6Q12149 733 aaKnown RBP2.79□□□□□ -1.96
VPS16YPL045W SPT6P23615 1451 aaKnown RBP2.79□□□□□ -1.96
VPS16YPL045W KIP1P28742 1111 aa2.79□□□□□ -1.96
VPS16YPL045W DAL3P32459 195 aa2.79□□□□□ -1.96
VPS16YPL045W HOG1P32485 435 aa2.79□□□□□ -1.96
VPS16YPL045W MPE1P35728 441 aaKnown RBP2.79□□□□□ -1.96
VPS16YPL045W YKL151CP36059 337 aa2.79□□□□□ -1.96
VPS16YPL045W YBR238CP38330 731 aaKnown RBP2.79□□□□□ -1.96
VPS16YPL045W NOC2P39744 710 aaKnown RBP2.79□□□□□ -1.96
VPS16YPL045W POL5P39985 1022 aaKnown RBP2.79□□□□□ -1.96
VPS16YPL045W RSC8P43609 557 aaKnown RBP2.79□□□□□ -1.96
VPS16YPL045W KIP3P53086 805 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms