RNA–Protein interactions for RNA: YOR124C

UBP2, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP2, Length 3,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP2YOR124C CSE1P33307 960 aa2.26□□□□□ -2.05
UBP2YOR124C GDT1P38301 280 aaPredicted RBP2.26□□□□□ -2.05
UBP2YOR124C HSM3P38348 480 aa2.26□□□□□ -2.05
UBP2YOR124C HUL5P53119 910 aa2.26□□□□□ -2.05
UBP2YOR124C ADE16P54113 591 aaKnown RBP2.26□□□□□ -2.05
UBP2YOR124C ALD6P54115 500 aaKnown RBP2.26□□□□□ -2.05
UBP2YOR124C RBA50Q04418 439 aa2.26□□□□□ -2.05
UBP2YOR124C SLK19Q08581 821 aaKnown RBP2.26□□□□□ -2.05
UBP2YOR124C MET7Q08645 548 aa2.26□□□□□ -2.05
UBP2YOR124C YLL054CQ12244 843 aa2.26□□□□□ -2.05
UBP2YOR124C LSO1Q3E827 93 aa2.26□□□□□ -2.05
UBP2YOR124C VMA4P22203 233 aaKnown RBP2.26□□□□□ -2.05
UBP2YOR124C CLB4P24871 460 aa2.26□□□□□ -2.05
UBP2YOR124C EUG1P32474 517 aa2.26□□□□□ -2.05
UBP2YOR124C TRM2P33753 639 aa2.26□□□□□ -2.05
UBP2YOR124C RPC37P36121 282 aa2.26□□□□□ -2.05
UBP2YOR124C TDA10P42938 290 aa2.26□□□□□ -2.05
UBP2YOR124C LAM5P43560 674 aa2.26□□□□□ -2.05
UBP2YOR124C SAD1P43589 448 aa2.26□□□□□ -2.05
UBP2YOR124C YJR054WP47114 497 aa2.26□□□□□ -2.05
UBP2YOR124C JIP4Q03361 876 aa2.26□□□□□ -2.05
UBP2YOR124C CLU1Q03690 1277 aaKnown RBP2.26□□□□□ -2.05
UBP2YOR124C YDR179W-AQ03983 463 aa2.26□□□□□ -2.05
UBP2YOR124C ARR1Q06596 294 aa2.26□□□□□ -2.05
UBP2YOR124C UBR2Q07963 1872 aa2.26□□□□□ -2.05
UBP2YOR124C PDC1P06169 563 aaKnown RBP2.26□□□□□ -2.05
UBP2YOR124C PPR1P07272 904 aaPredicted RBP2.26□□□□□ -2.05
UBP2YOR124C ALG1P16661 449 aa2.26□□□□□ -2.05
UBP2YOR124C PEP3P27801 918 aa2.26□□□□□ -2.05
UBP2YOR124C PAP1P29468 568 aaKnown RBP2.26□□□□□ -2.05
UBP2YOR124C RPN2P32565 945 aaKnown RBP2.26□□□□□ -2.05
UBP2YOR124C GOS1P38736 223 aa2.26□□□□□ -2.05
UBP2YOR124C MIP6P38760 659 aaKnown RBP2.26□□□□□ -2.05
UBP2YOR124C SCS2P40075 244 aaKnown RBP2.26□□□□□ -2.05
UBP2YOR124C NMA2P53204 395 aa2.26□□□□□ -2.05
UBP2YOR124C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
UBP2YOR124C YKR005CQ02203 525 aa2.26□□□□□ -2.05
UBP2YOR124C PPM1Q04081 328 aa2.26□□□□□ -2.05
UBP2YOR124C ITT1Q04638 464 aa2.26□□□□□ -2.05
UBP2YOR124C ERB1Q04660 807 aaKnown RBP2.26□□□□□ -2.05
UBP2YOR124C NBA1Q08229 501 aaKnown RBP2.26□□□□□ -2.05
UBP2YOR124C NCR1Q12200 1170 aa2.26□□□□□ -2.05
UBP2YOR124C SCM3Q12334 223 aa2.26□□□□□ -2.05
UBP2YOR124C TY4B-PA0A0B7P3V8 1104 aa2.25□□□□□ -2.05
UBP2YOR124C CDC8P00572 216 aa2.25□□□□□ -2.05
UBP2YOR124C CPR3P25719 182 aa2.25□□□□□ -2.05
UBP2YOR124C SEC8P32855 1065 aa2.25□□□□□ -2.05
UBP2YOR124C CTM1P38818 585 aa2.25□□□□□ -2.05
UBP2YOR124C CRG1P38892 291 aaRIP-Chip data2.25□□□□□ -2.05not detected
UBP2YOR124C SIT1P39980 628 aa2.25□□□□□ -2.05
UBP2YOR124C IES5P40060 125 aa2.25□□□□□ -2.05
UBP2YOR124C YKE2P52553 114 aa2.25□□□□□ -2.05
UBP2YOR124C MIG2P53035 382 aa2.25□□□□□ -2.05
UBP2YOR124C YNR029CP53729 429 aaKnown RBP2.25□□□□□ -2.05
UBP2YOR124C IST1P53843 298 aaPredicted RBP2.25□□□□□ -2.05
UBP2YOR124C GDE1Q02979 1223 aa2.25□□□□□ -2.05
UBP2YOR124C SXM1Q04175 944 aaKnown RBP2.25□□□□□ -2.05
UBP2YOR124C YDR344CQ05510 147 aa2.25□□□□□ -2.05
UBP2YOR124C NSE3Q05541 303 aa2.25□□□□□ -2.05
UBP2YOR124C PIG1Q06216 648 aa2.25□□□□□ -2.05
UBP2YOR124C YDL114WQ07530 308 aa2.25□□□□□ -2.05
UBP2YOR124C GRE2Q12068 342 aaKnown RBP2.25□□□□□ -2.05
UBP2YOR124C GYP5Q12344 894 aa2.25□□□□□ -2.05
UBP2YOR124C NOT5Q12514 560 aaPredicted RBP2.25□□□□□ -2.05
UBP2YOR124C PMD1P32634 1753 aa2.25□□□□□ -2.05
UBP2YOR124C ADH4P10127 382 aa2.25□□□□□ -2.05
UBP2YOR124C URA4P20051 364 aa2.25□□□□□ -2.05
UBP2YOR124C CDC15P27636 974 aa2.25□□□□□ -2.05
UBP2YOR124C SEC65P29478 273 aa2.25□□□□□ -2.05
UBP2YOR124C ITR2P30606 609 aa2.25□□□□□ -2.05
UBP2YOR124C EFB1P32471 206 aaKnown RBP2.25□□□□□ -2.05
UBP2YOR124C GEF1P37020 779 aa2.25□□□□□ -2.05
UBP2YOR124C PEX18P38855 283 aa2.25□□□□□ -2.05
UBP2YOR124C NUP60P39705 539 aa2.25□□□□□ -2.05
UBP2YOR124C SMX2P40204 77 aaKnown RBP2.25□□□□□ -2.05
UBP2YOR124C REF2P42073 533 aaPredicted RBP2.25□□□□□ -2.05
UBP2YOR124C PIB2P53191 635 aa2.25□□□□□ -2.05
UBP2YOR124C SPO19Q03029 223 aa2.25□□□□□ -2.05
UBP2YOR124C HOT1Q03213 719 aa2.25□□□□□ -2.05
UBP2YOR124C TFB3Q03290 321 aa2.25□□□□□ -2.05
UBP2YOR124C GRX3Q03835 250 aa2.25□□□□□ -2.05
UBP2YOR124C ECI1Q05871 280 aa2.25□□□□□ -2.05
UBP2YOR124C MDM20Q12387 796 aaKnown RBP2.25□□□□□ -2.05
UBP2YOR124C NKP1Q12493 238 aa2.25□□□□□ -2.05
UBP2YOR124C TY4A-HQ6Q5P6 413 aa2.25□□□□□ -2.05
UBP2YOR124C FOB1O13329 566 aa2.25□□□□□ -2.05
UBP2YOR124C VPS1P21576 704 aaKnown RBP2.25□□□□□ -2.05
UBP2YOR124C NAM7P30771 971 aaKnown RBP2.25□□□□□ -2.05
UBP2YOR124C EXO84P38261 753 aa2.25□□□□□ -2.05
UBP2YOR124C FTH1P38310 465 aa2.25□□□□□ -2.05
UBP2YOR124C SET5P38890 526 aaKnown RBP2.25□□□□□ -2.05
UBP2YOR124C YHB1P39676 399 aaKnown RBP2.25□□□□□ -2.05
UBP2YOR124C SQS1P53866 767 aaKnown RBP2.25□□□□□ -2.05
UBP2YOR124C SWP1Q02795 286 aa2.25□□□□□ -2.05
UBP2YOR124C YPL109CQ02981 657 aa2.25□□□□□ -2.05
UBP2YOR124C GFD1Q04839 188 aaKnown RBP2.25□□□□□ -2.05
UBP2YOR124C SPN1Q06505 410 aaPredicted RBP2.25□□□□□ -2.05
UBP2YOR124C INP54Q08227 384 aaKnown RBP2.25□□□□□ -2.05
UBP2YOR124C RUD3Q12234 484 aaKnown RBP2.25□□□□□ -2.05
UBP2YOR124C RIB2Q12362 591 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms