RNA–Protein interactions for RNA: YOR009W

TIR4, Transcript of Cell wall mannoprotein, yeast

Gene TIR4, Length 1,464 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR4	YOR009W	TY1B-A	O13527	1196 aa	Known RBP	13.42	□□□□□ -0.26
TIR4	YOR009W	CDC37	P06101	506 aa	Known RBP	13.42	□□□□□ -0.26
TIR4	YOR009W	MRC1	P25588	1096 aa		13.42	□□□□□ -0.26
TIR4	YOR009W	EBS1	Q03466	884 aa	Known RBP	13.42	□□□□□ -0.26
TIR4	YOR009W	CDC19	P00549	500 aa	Known RBP	13.41	□□□□□ -0.26
TIR4	YOR009W	SRD1	P09007	221 aa		13.41	□□□□□ -0.26
TIR4	YOR009W	TKL1	P23254	680 aa	Known RBP	13.41	□□□□□ -0.26
TIR4	YOR009W	YKL091C	P33324	310 aa	Known RBP	13.41	□□□□□ -0.26
TIR4	YOR009W	APE3	P37302	537 aa	Known RBP	13.41	□□□□□ -0.26
TIR4	YOR009W	REG2	P38232	338 aa		13.41	□□□□□ -0.26
TIR4	YOR009W	ETP1	P38748	585 aa	Known RBP	13.41	□□□□□ -0.26
TIR4	YOR009W	VPS29	P38759	282 aa		13.41	□□□□□ -0.26
TIR4	YOR009W	BIM1	P40013	344 aa		13.41	□□□□□ -0.26
TIR4	YOR009W	FIS1	P40515	155 aa		13.4	□□□□□ -0.26
TIR4	YOR009W	HUL4	P40985	892 aa		13.4	□□□□□ -0.26
TIR4	YOR009W	SLD5	Q03406	294 aa		13.4	□□□□□ -0.26
TIR4	YOR009W	CRD1	Q07560	283 aa		13.4	□□□□□ -0.26
TIR4	YOR009W	SHM1	P37292	490 aa	Predicted RBP	13.39	□□□□□ -0.27
TIR4	YOR009W	YAF9	P53930	226 aa		13.39	□□□□□ -0.27
TIR4	YOR009W	YAP7	Q08182	245 aa		13.39	□□□□□ -0.27
TIR4	YOR009W	MOT2	P34909	587 aa	Known RBP	13.38	□□□□□ -0.27
TIR4	YOR009W	DBP7	P36120	742 aa	Known RBP	13.38	□□□□□ -0.27
TIR4	YOR009W	TOS3	P43637	560 aa		13.38	□□□□□ -0.27
TIR4	YOR009W	CYC8	P14922	966 aa		13.37	□□□□□ -0.27
TIR4	YOR009W	OM45	P16547	393 aa		13.37	□□□□□ -0.27
TIR4	YOR009W	RPC25	P35718	212 aa		13.37	□□□□□ -0.27
TIR4	YOR009W	PXL1	P36166	706 aa		13.37	□□□□□ -0.27
TIR4	YOR009W	PGM2	P37012	569 aa	Known RBP	13.37	□□□□□ -0.27
TIR4	YOR009W	MGA2	P40578	1113 aa		13.37	□□□□□ -0.27
TIR4	YOR009W	STR2	P47164	639 aa		13.37	□□□□□ -0.27
TIR4	YOR009W	NBP1	P52919	319 aa	Predicted RBP	13.37	□□□□□ -0.27
TIR4	YOR009W	VPS75	P53853	264 aa		13.37	□□□□□ -0.27
TIR4	YOR009W	YMR321C	Q04898	105 aa		13.37	□□□□□ -0.27
TIR4	YOR009W	TCO89	Q08921	799 aa		13.37	□□□□□ -0.27
TIR4	YOR009W	PDC1	P06169	563 aa	Known RBP	13.36	□□□□□ -0.27
TIR4	YOR009W	RPS6A	P0CX37	236 aa	Known RBP	13.36	□□□□□ -0.27
TIR4	YOR009W	RPS6B	P0CX38	236 aa	Predicted RBP	13.36	□□□□□ -0.27
TIR4	YOR009W	PHO13	P19881	312 aa		13.36	□□□□□ -0.27
TIR4	YOR009W	SPR3	P41901	512 aa		13.36	□□□□□ -0.27
TIR4	YOR009W	UBP15	P50101	1230 aa		13.36	□□□□□ -0.27
TIR4	YOR009W	ZPR1	P53303	486 aa	Known RBP	13.36	□□□□□ -0.27
TIR4	YOR009W	ARK1	P53974	638 aa		13.36	□□□□□ -0.27
TIR4	YOR009W	YDR461C-A	Q2V2P7	80 aa		13.36	□□□□□ -0.27
TIR4	YOR009W	SEC65	P29478	273 aa		13.36	□□□□□ -0.27
TIR4	YOR009W	SPT8	P38915	602 aa		13.36	□□□□□ -0.27
TIR4	YOR009W	SEC5	P89102	971 aa		13.36	□□□□□ -0.27
TIR4	YOR009W	DAL7	P21826	554 aa		13.35	□□□□□ -0.27
TIR4	YOR009W	MSH3	P25336	1018 aa		13.35	□□□□□ -0.27
TIR4	YOR009W	TRK2	P28584	889 aa		13.35	□□□□□ -0.27
TIR4	YOR009W	YEL1	P34225	687 aa		13.35	□□□□□ -0.27
TIR4	YOR009W	MIP6	P38760	659 aa	Known RBP	13.35	□□□□□ -0.27
TIR4	YOR009W	CTM1	P38818	585 aa		13.35	□□□□□ -0.27
TIR4	YOR009W	RTT107	P38850	1070 aa		13.35	□□□□□ -0.27
TIR4	YOR009W	UBP5	P39944	805 aa		13.35	□□□□□ -0.27
TIR4	YOR009W	RPN3	P40016	523 aa	Known RBP	13.35	□□□□□ -0.27
TIR4	YOR009W	HUL5	P53119	910 aa		13.35	□□□□□ -0.27
TIR4	YOR009W	TOF1	P53840	1238 aa		13.35	□□□□□ -0.27
TIR4	YOR009W	TY3A-G	Q12173	290 aa		13.35	□□□□□ -0.27
TIR4	YOR009W	NCR1	Q12200	1170 aa		13.35	□□□□□ -0.27
TIR4	YOR009W	TY3A-I	Q99219	290 aa		13.35	□□□□□ -0.27
TIR4	YOR009W	MNR2	P35724	969 aa		13.34	□□□□□ -0.27
TIR4	YOR009W	SAP190	P36123	1033 aa		13.34	□□□□□ -0.27
TIR4	YOR009W	YFL034W	P43564	1073 aa		13.34	□□□□□ -0.27
TIR4	YOR009W	YPL277C	Q08989	487 aa		13.34	□□□□□ -0.27
TIR4	YOR009W	ECM29	P38737	1868 aa		13.34	□□□□□ -0.27
TIR4	YOR009W	TCP1	P12612	559 aa	Known RBP	13.33	□□□□□ -0.28
TIR4	YOR009W	SPO11	P23179	398 aa		13.33	□□□□□ -0.28
TIR4	YOR009W	YUR1	P26725	428 aa		13.33	□□□□□ -0.28
TIR4	YOR009W	SEC8	P32855	1065 aa		13.33	□□□□□ -0.28
TIR4	YOR009W	EBP2	P36049	427 aa	Known RBP	13.33	□□□□□ -0.28
TIR4	YOR009W	NCS2	P53923	493 aa	Predicted RBP	13.33	□□□□□ -0.28
TIR4	YOR009W	APL4	Q12028	832 aa		13.33	□□□□□ -0.28
TIR4	YOR009W	TFC4	P33339	1025 aa		13.32	□□□□□ -0.28
TIR4	YOR009W	RSC30	P38781	883 aa		13.32	□□□□□ -0.28
TIR4	YOR009W	SCS3	P53012	380 aa		13.32	□□□□□ -0.28
TIR4	YOR009W	MAK16	P10962	306 aa	Predicted RBP	13.31	□□□□□ -0.28
TIR4	YOR009W	CDC48	P25694	835 aa	Known RBP	13.31	□□□□□ -0.28
TIR4	YOR009W	ERC1	P38767	581 aa		13.31	□□□□□ -0.28
TIR4	YOR009W	HMF1	P40037	129 aa	Known RBP	13.31	□□□□□ -0.28
TIR4	YOR009W	HFM1	P51979	1187 aa		13.31	□□□□□ -0.28
TIR4	YOR009W	SVF1	Q05515	481 aa		13.31	□□□□□ -0.28
TIR4	YOR009W	CWC2	Q12046	339 aa	Predicted RBP	13.31	□□□□□ -0.28
TIR4	YOR009W	PCK1	P10963	549 aa		13.3	□□□□□ -0.28
TIR4	YOR009W	MFT1	P33441	392 aa	Known RBP	13.3	□□□□□ -0.28
TIR4	YOR009W	TVP38	P36164	337 aa		13.3	□□□□□ -0.28
TIR4	YOR009W	CTR9	P89105	1077 aa		13.3	□□□□□ -0.28
TIR4	YOR009W	SPO75	Q07798	868 aa		13.3	□□□□□ -0.28
TIR4	YOR009W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	13.29	□□□□□ -0.28	not detected
TIR4	YOR009W	RPS7B	P48164	190 aa	Known RBP	13.29	□□□□□ -0.28
TIR4	YOR009W	YLR225C	Q05948	407 aa	Known RBP	13.29	□□□□□ -0.28
TIR4	YOR009W	COG4	Q06096	861 aa		13.29	□□□□□ -0.28
TIR4	YOR009W	MSC6	Q08818	692 aa	Known RBP	13.29	□□□□□ -0.28
TIR4	YOR009W	MED1	Q12321	566 aa		13.29	□□□□□ -0.28
TIR4	YOR009W	TRM11	Q12463	433 aa		13.29	□□□□□ -0.28
TIR4	YOR009W	TIF6	Q12522	245 aa	Known RBP	13.29	□□□□□ -0.28
TIR4	YOR009W	RGT1	P32862	1170 aa		13.29	□□□□□ -0.28
TIR4	YOR009W	LEO1	P38439	464 aa		13.29	□□□□□ -0.28
TIR4	YOR009W	FYV8	P46949	817 aa	Known RBP	13.29	□□□□□ -0.28
TIR4	YOR009W	ATG1	P53104	897 aa		13.29	□□□□□ -0.28
TIR4	YOR009W	CUR1	Q06469	252 aa		13.29	□□□□□ -0.28

Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms