RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W SIP3P38717 1229 aa6.56□□□□□ -1.36
ATG4YNL223W PIH1P38768 344 aa6.56□□□□□ -1.36
ATG4YNL223W CTM1P38818 585 aa6.56□□□□□ -1.36
ATG4YNL223W GPD2P41911 440 aaKnown RBP6.56□□□□□ -1.36
ATG4YNL223W CTR1P49573 406 aa6.56□□□□□ -1.36
ATG4YNL223W GUP1P53154 560 aa6.56□□□□□ -1.36
ATG4YNL223W PTA1Q01329 785 aaPredicted RBP6.56□□□□□ -1.36
ATG4YNL223W DUS3Q06053 668 aaKnown RBP6.56□□□□□ -1.36
ATG4YNL223W SUP45P12385 437 aaKnown RBP6.55□□□□□ -1.36
ATG4YNL223W PFK1P16861 987 aaKnown RBP6.55□□□□□ -1.36
ATG4YNL223W MSH3P25336 1018 aa6.55□□□□□ -1.36
ATG4YNL223W PGM1P33401 570 aaKnown RBP6.55□□□□□ -1.36
ATG4YNL223W SHP1P34223 423 aa6.55□□□□□ -1.36
ATG4YNL223W MCR1P36060 302 aaKnown RBP6.55□□□□□ -1.36
ATG4YNL223W PCS60P38137 543 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36 RIP-Chip
ATG4YNL223W PPS1P38148 807 aa6.55□□□□□ -1.36
ATG4YNL223W HUL4P40985 892 aa6.55□□□□□ -1.36
ATG4YNL223W NET1P47035 1189 aa6.55□□□□□ -1.36
ATG4YNL223W PEX21P50091 288 aa6.55□□□□□ -1.36
ATG4YNL223W DIP5P53388 608 aa6.55□□□□□ -1.36
ATG4YNL223W CNM67P53865 581 aaKnown RBP6.55□□□□□ -1.36
ATG4YNL223W YAP7Q08182 245 aa6.55□□□□□ -1.36
ATG4YNL223W YPL216WQ08964 1102 aa6.55□□□□□ -1.36
ATG4YNL223W RKM4Q12504 494 aa6.55□□□□□ -1.36
ATG4YNL223W RPS6AP0CX37 236 aaKnown RBP6.54□□□□□ -1.36
ATG4YNL223W RPS6BP0CX38 236 aaPredicted RBP6.54□□□□□ -1.36
ATG4YNL223W CLN3P13365 580 aa6.54□□□□□ -1.36
ATG4YNL223W SSA4P22202 642 aaKnown RBP6.54□□□□□ -1.36
ATG4YNL223W SPO11P23179 398 aa6.54□□□□□ -1.36
ATG4YNL223W PRP22P24384 1145 aaKnown RBP6.54□□□□□ -1.36
ATG4YNL223W SEC65P29478 273 aa6.54□□□□□ -1.36
ATG4YNL223W SUV3P32580 737 aa6.54□□□□□ -1.36
ATG4YNL223W UTR4P32626 227 aa6.54□□□□□ -1.36
ATG4YNL223W MFT1P33441 392 aaKnown RBP6.54□□□□□ -1.36
ATG4YNL223W MCD4P36051 919 aa6.54□□□□□ -1.36
ATG4YNL223W YKR018CP36114 725 aa6.54□□□□□ -1.36
ATG4YNL223W MIP6P38760 659 aaKnown RBP6.54□□□□□ -1.36
ATG4YNL223W RTT107P38850 1070 aa6.54□□□□□ -1.36
ATG4YNL223W SPT8P38915 602 aa6.54□□□□□ -1.36
ATG4YNL223W ULP2P40537 1034 aaPredicted RBP6.54□□□□□ -1.36
ATG4YNL223W STU2P46675 888 aa6.54□□□□□ -1.36
ATG4YNL223W PHM6Q05637 104 aa6.54□□□□□ -1.36
ATG4YNL223W YDL057WQ07379 328 aa6.54□□□□□ -1.36
ATG4YNL223W ISA1Q07821 250 aaPredicted RBP6.54□□□□□ -1.36
ATG4YNL223W TCO89Q08921 799 aa6.54□□□□□ -1.36
ATG4YNL223W APL4Q12028 832 aa6.54□□□□□ -1.36
ATG4YNL223W TY1B-AO13527 1196 aaKnown RBP6.53□□□□□ -1.36
ATG4YNL223W PGK1P00560 416 aaKnown RBP6.53□□□□□ -1.36
ATG4YNL223W SRD1P09007 221 aa6.53□□□□□ -1.36
ATG4YNL223W VMA2P16140 517 aaKnown RBP6.53□□□□□ -1.36
ATG4YNL223W OM45P16547 393 aa6.53□□□□□ -1.36
ATG4YNL223W SPC110P32380 944 aa6.53□□□□□ -1.36
ATG4YNL223W RPC25P35718 212 aa6.53□□□□□ -1.36
ATG4YNL223W GPB2P39717 880 aa6.53□□□□□ -1.36
ATG4YNL223W BIM1P40013 344 aa6.53□□□□□ -1.36
ATG4YNL223W FYV8P46949 817 aaKnown RBP6.53□□□□□ -1.36
ATG4YNL223W YGL039WP53183 348 aaKnown RBP6.53□□□□□ -1.36
ATG4YNL223W SEC5P89102 971 aa6.53□□□□□ -1.36
ATG4YNL223W ESC2Q06340 456 aa6.53□□□□□ -1.36
ATG4YNL223W CFT2Q12102 859 aaPredicted RBP6.53□□□□□ -1.36
ATG4YNL223W MAK16P10962 306 aaPredicted RBP6.53□□□□□ -1.36
ATG4YNL223W VMA1P17255 1071 aaKnown RBP6.53□□□□□ -1.36
ATG4YNL223W CLB5P30283 435 aa6.53□□□□□ -1.36
ATG4YNL223W PGM2P37012 569 aaKnown RBP6.53□□□□□ -1.36
ATG4YNL223W LEO1P38439 464 aa6.53□□□□□ -1.36
ATG4YNL223W UBP5P39944 805 aa6.53□□□□□ -1.36
ATG4YNL223W FIS1P40515 155 aa6.53□□□□□ -1.36
ATG4YNL223W YFL034WP43564 1073 aa6.53□□□□□ -1.36
ATG4YNL223W TOS3P43637 560 aa6.53□□□□□ -1.36
ATG4YNL223W HFM1P51979 1187 aa6.53□□□□□ -1.36
ATG4YNL223W NBP1P52919 319 aaPredicted RBP6.53□□□□□ -1.36
ATG4YNL223W SPP1Q03012 353 aa6.53□□□□□ -1.36
ATG4YNL223W YCG1Q06680 1035 aa6.53□□□□□ -1.36
ATG4YNL223W TRK2P28584 889 aa6.52□□□□□ -1.37
ATG4YNL223W PCH2P38126 564 aa6.52□□□□□ -1.37
ATG4YNL223W YGR125WP53273 1036 aa6.52□□□□□ -1.37
ATG4YNL223W COG4Q06096 861 aa6.52□□□□□ -1.37
ATG4YNL223W CRD1Q07560 283 aa6.52□□□□□ -1.37
ATG4YNL223W CWC2Q12046 339 aaPredicted RBP6.52□□□□□ -1.37
ATG4YNL223W ERP3Q12403 225 aa6.52□□□□□ -1.37
ATG4YNL223W CDC19P00549 500 aaKnown RBP6.51□□□□□ -1.37
ATG4YNL223W HVG1P0CE11 249 aa6.51□□□□□ -1.37
ATG4YNL223W DAL7P21826 554 aa6.51□□□□□ -1.37
ATG4YNL223W TKL1P23254 680 aaKnown RBP6.51□□□□□ -1.37
ATG4YNL223W PKC1P24583 1151 aa6.51□□□□□ -1.37
ATG4YNL223W RPC53P25441 422 aa6.51□□□□□ -1.37
ATG4YNL223W EUG1P32474 517 aa6.51□□□□□ -1.37
ATG4YNL223W IXR1P33417 597 aa6.51□□□□□ -1.37
ATG4YNL223W TIF11P38912 153 aaKnown RBP6.51□□□□□ -1.37
ATG4YNL223W VFA1P40080 203 aa6.51□□□□□ -1.37
ATG4YNL223W ZPR1P53303 486 aaKnown RBP6.51□□□□□ -1.37
ATG4YNL223W TOF1P53840 1238 aa6.51□□□□□ -1.37
ATG4YNL223W YAF9P53930 226 aa6.51□□□□□ -1.37
ATG4YNL223W ARK1P53974 638 aa6.51□□□□□ -1.37
ATG4YNL223W SPO75Q07798 868 aa6.51□□□□□ -1.37
ATG4YNL223W YPL277CQ08989 487 aa6.51□□□□□ -1.37
ATG4YNL223W HMI1Q12039 706 aa6.51□□□□□ -1.37
ATG4YNL223W ATG9Q12142 997 aa6.51□□□□□ -1.37
ATG4YNL223W PCK1P10963 549 aa6.5□□□□□ -1.37
ATG4YNL223W YEL1P34225 687 aa6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms