RNA–Protein interactions for RNA: YNL172W

APC1, Transcript of Largest subunit of the Anaphase-Promoting Complex/Cyclosome, yeast

Gene APC1, Length 5,247 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC1	YNL172W	HUL4	P40985	892 aa		4.86	□□□□□ -1.63
APC1	YNL172W	FOL2	P51601	243 aa	Known RBP	4.86	□□□□□ -1.63
APC1	YNL172W	SAC6	P32599	642 aa	Known RBP	4.86	□□□□□ -1.63
APC1	YNL172W	DRE2	P36152	348 aa		4.86	□□□□□ -1.63
APC1	YNL172W	NOC2	P39744	710 aa	Known RBP	4.86	□□□□□ -1.63
APC1	YNL172W	VID28	P40547	921 aa		4.86	□□□□□ -1.63
APC1	YNL172W	PSP1	P50896	841 aa	Known RBP	4.86	□□□□□ -1.63
APC1	YNL172W	NCS2	P53923	493 aa	Predicted RBP	4.86	□□□□□ -1.63
APC1	YNL172W	CTM1	P38818	585 aa		4.86	□□□□□ -1.63
APC1	YNL172W	EFM6	P53970	246 aa		4.86	□□□□□ -1.63
APC1	YNL172W	MCR1	P36060	302 aa	Known RBP	4.85	□□□□□ -1.63
APC1	YNL172W	SPC72	P39723	622 aa		4.85	□□□□□ -1.63
APC1	YNL172W	TSR1	Q07381	788 aa	Known RBP	4.85	□□□□□ -1.63
APC1	YNL172W	TYE7	P33122	291 aa	Predicted RBP	4.85	□□□□□ -1.63
APC1	YNL172W	SPH1	Q06160	661 aa		4.85	□□□□□ -1.63
APC1	YNL172W	TUS1	Q06412	1307 aa		4.85	□□□□□ -1.63
APC1	YNL172W	HAP2	P06774	265 aa		4.85	□□□□□ -1.63
APC1	YNL172W	ACE2	P21192	770 aa		4.85	□□□□□ -1.63
APC1	YNL172W	PEP3	P27801	918 aa		4.85	□□□□□ -1.63
APC1	YNL172W	EFB1	P32471	206 aa	Known RBP	4.85	□□□□□ -1.63
APC1	YNL172W	UTR4	P32626	227 aa		4.85	□□□□□ -1.63
APC1	YNL172W	CDC27	P38042	758 aa		4.85	□□□□□ -1.63
APC1	YNL172W	VAC8	P39968	578 aa		4.85	□□□□□ -1.63
APC1	YNL172W	YJR061W	P40355	935 aa		4.85	□□□□□ -1.63
APC1	YNL172W	YGR130C	P53278	816 aa		4.85	□□□□□ -1.63
APC1	YNL172W	ANP1	P32629	500 aa		4.85	□□□□□ -1.63
APC1	YNL172W	CCM1	P48237	864 aa	Predicted RBP	4.85	□□□□□ -1.63
APC1	YNL172W	CPR6	P53691	371 aa	Known RBP	4.85	□□□□□ -1.63
APC1	YNL172W	PEX28	P38848	579 aa		4.84	□□□□□ -1.63
APC1	YNL172W	YPR204W	Q08995	1032 aa		4.84	□□□□□ -1.63
APC1	YNL172W	POX1	P13711	748 aa		4.84	□□□□□ -1.63
APC1	YNL172W	YJU2	P28320	278 aa	Predicted RBP	4.84	□□□□□ -1.63
APC1	YNL172W	YHR202W	P38887	602 aa		4.84	□□□□□ -1.63
APC1	YNL172W	TFG2	P41896	400 aa	Predicted RBP	4.84	□□□□□ -1.63
APC1	YNL172W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
APC1	YNL172W	YLR297W	Q05899	129 aa		4.84	□□□□□ -1.63
APC1	YNL172W	UBX5	Q06682	500 aa		4.84	□□□□□ -1.63
APC1	YNL172W	SNF2	P22082	1703 aa		4.84	□□□□□ -1.63
APC1	YNL172W	SGE1	P33335	543 aa		4.84	□□□□□ -1.63
APC1	YNL172W	PAM1	P37304	830 aa	Known RBP	4.84	□□□□□ -1.63
APC1	YNL172W	ILV1	P00927	576 aa	Known RBP	4.84	□□□□□ -1.64
APC1	YNL172W	RAD3	P06839	778 aa		4.84	□□□□□ -1.64
APC1	YNL172W	HCA4	P20448	770 aa	Known RBP	4.84	□□□□□ -1.64
APC1	YNL172W	FTR1	P40088	404 aa		4.84	□□□□□ -1.64
APC1	YNL172W	TPO2	P53283	614 aa		4.84	□□□□□ -1.64
APC1	YNL172W	YMR084W	A2P2R3	262 aa		4.83	□□□□□ -1.64
APC1	YNL172W	BIK1	P11709	440 aa		4.83	□□□□□ -1.64
APC1	YNL172W	CCE1	Q03702	353 aa		4.83	□□□□□ -1.64
APC1	YNL172W	TOS4	Q06266	489 aa		4.83	□□□□□ -1.64
APC1	YNL172W	MRI1	Q06489	411 aa	Known RBP	4.83	□□□□□ -1.64
APC1	YNL172W	NCR1	Q12200	1170 aa		4.83	□□□□□ -1.64
APC1	YNL172W	JIP3	O13555	125 aa		4.83	□□□□□ -1.64
APC1	YNL172W	PHO8	P11491	566 aa		4.83	□□□□□ -1.64
APC1	YNL172W	ACF4	P47129	309 aa		4.83	□□□□□ -1.64
APC1	YNL172W	YNR061C	P53747	219 aa		4.83	□□□□□ -1.64
APC1	YNL172W	UTP13	Q05946	817 aa	Known RBP	4.83	□□□□□ -1.64
APC1	YNL172W	SUT2	Q12286	268 aa		4.83	□□□□□ -1.64
APC1	YNL172W	YHL026C	P38740	315 aa		4.83	□□□□□ -1.64
APC1	YNL172W	YJR054W	P47114	497 aa		4.83	□□□□□ -1.64
APC1	YNL172W	TGL2	P54857	326 aa		4.83	□□□□□ -1.64
APC1	YNL172W	PCD1	Q12524	340 aa		4.83	□□□□□ -1.64
APC1	YNL172W	NOT3	P06102	836 aa	Known RBP	4.83	□□□□□ -1.64
APC1	YNL172W	CKA2	P19454	339 aa		4.83	□□□□□ -1.64
APC1	YNL172W	RNR3	P21672	869 aa	Known RBP	4.83	□□□□□ -1.64
APC1	YNL172W	GUT1	P32190	709 aa		4.83	□□□□□ -1.64
APC1	YNL172W	PSY2	P40164	858 aa		4.83	□□□□□ -1.64
APC1	YNL172W	TGL3	P40308	642 aa		4.83	□□□□□ -1.64
APC1	YNL172W	FMS1	P50264	508 aa		4.83	□□□□□ -1.64
APC1	YNL172W	ALG11	P53954	548 aa	Known RBP	4.83	□□□□□ -1.64
APC1	YNL172W	INA17	Q02888	182 aa		4.83	□□□□□ -1.64
APC1	YNL172W	YOR296W	Q08748	1289 aa		4.83	□□□□□ -1.64
APC1	YNL172W	HXK1	P04806	485 aa	Known RBP	4.82	□□□□□ -1.64
APC1	YNL172W	SUI2	P20459	304 aa	Known RBP	4.82	□□□□□ -1.64
APC1	YNL172W	DPH2	P32461	534 aa		4.82	□□□□□ -1.64
APC1	YNL172W	BCH2	P36122	765 aa		4.82	□□□□□ -1.64
APC1	YNL172W	IES1	P43579	692 aa		4.82	□□□□□ -1.64
APC1	YNL172W	PCL10	P53124	433 aa		4.82	□□□□□ -1.64
APC1	YNL172W	MCD1	Q12158	566 aa		4.82	□□□□□ -1.64
APC1	YNL172W	SEY1	Q99287	776 aa		4.82	□□□□□ -1.64
APC1	YNL172W	TKL1	P23254	680 aa	Known RBP	4.82	□□□□□ -1.64
APC1	YNL172W	RME1	P32338	300 aa	Known RBP	4.82	□□□□□ -1.64
APC1	YNL172W	MRPL40	P36534	297 aa		4.82	□□□□□ -1.64
APC1	YNL172W	MFB1	Q04922	465 aa		4.82	□□□□□ -1.64
APC1	YNL172W	LDB19	Q12502	818 aa		4.82	□□□□□ -1.64
APC1	YNL172W	URB1	P34241	1764 aa	Known RBP	4.82	□□□□□ -1.64
APC1	YNL172W	NUC1	P08466	329 aa		4.82	□□□□□ -1.64
APC1	YNL172W	PAT1	P25644	796 aa	Known RBP	4.82	□□□□□ -1.64
APC1	YNL172W	MMS4	P38257	691 aa		4.82	□□□□□ -1.64
APC1	YNL172W	AZR1	P50080	613 aa		4.82	□□□□□ -1.64
APC1	YNL172W	VMA4	P22203	233 aa	Known RBP	4.82	□□□□□ -1.64
APC1	YNL172W	PRP22	P24384	1145 aa	Known RBP	4.82	□□□□□ -1.64
APC1	YNL172W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
APC1	YNL172W	YNL247W	P53852	767 aa	Known RBP	4.82	□□□□□ -1.64
APC1	YNL172W	PRO2	P54885	456 aa	Known RBP	4.82	□□□□□ -1.64
APC1	YNL172W	MAG2	Q06436	670 aa	Known RBP	4.82	□□□□□ -1.64
APC1	YNL172W	PPM2	Q08282	695 aa		4.82	□□□□□ -1.64
APC1	YNL172W	SGT2	Q12118	346 aa	Known RBP	4.82	□□□□□ -1.64
APC1	YNL172W	REC8	Q12188	680 aa		4.82	□□□□□ -1.64
APC1	YNL172W	FKS3	Q04952	1785 aa		4.82	□□□□□ -1.64
APC1	YNL172W	NAT1	P12945	854 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms