RNA–Protein interactions for RNA: YLR340W

RPP0, Transcript of Conserved ribosomal protein P0 of the ribosomal stalk, yeastyeast

Gene RPP0, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP0YLR340W CDC45Q08032 650 aa5.46□□□□□ -1.54
RPP0YLR340W RAD59Q12223 238 aa5.46□□□□□ -1.54
RPP0YLR340W FKS1P38631 1876 aaKnown RBP5.45□□□□□ -1.54
RPP0YLR340W NUC1P08466 329 aa5.45□□□□□ -1.54
RPP0YLR340W AFT1P22149 690 aa5.45□□□□□ -1.54
RPP0YLR340W GBP2P25555 427 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
RPP0YLR340W SYN8P31377 255 aa5.45□□□□□ -1.54
RPP0YLR340W ECM21P38167 1117 aaKnown RBP5.45□□□□□ -1.54
RPP0YLR340W HST2P53686 357 aa5.45□□□□□ -1.54
RPP0YLR340W HST3P53687 447 aa5.45□□□□□ -1.54
RPP0YLR340W RPS15Q01855 142 aaKnown RBP5.45□□□□□ -1.54
RPP0YLR340W YPL062WQ02781 134 aa5.45□□□□□ -1.54
RPP0YLR340W SKY1Q03656 742 aa5.45□□□□□ -1.54
RPP0YLR340W YML020WQ03722 664 aa5.45□□□□□ -1.54
RPP0YLR340W RVB2Q12464 471 aaKnown RBP5.45□□□□□ -1.54
RPP0YLR340W RIT1P23796 513 aa5.44□□□□□ -1.54
RPP0YLR340W FUB1P25659 250 aa5.44□□□□□ -1.54
RPP0YLR340W STB5P38699 743 aa5.44□□□□□ -1.54
RPP0YLR340W OSH3P38713 996 aaKnown RBP5.44□□□□□ -1.54
RPP0YLR340W NDT80P38830 627 aa5.44□□□□□ -1.54
RPP0YLR340W LIF1P53150 421 aa5.44□□□□□ -1.54
RPP0YLR340W MYO3P36006 1272 aa5.43□□□□□ -1.54
RPP0YLR340W OPT1P40897 799 aa5.43□□□□□ -1.54
RPP0YLR340W UFD2P54860 961 aa5.43□□□□□ -1.54
RPP0YLR340W PTA1Q01329 785 aaPredicted RBP5.43□□□□□ -1.54
RPP0YLR340W YLL058WQ12198 575 aa5.43□□□□□ -1.54
RPP0YLR340W MMP1Q12372 583 aa5.43□□□□□ -1.54
RPP0YLR340W RAD2P07276 1031 aa5.42□□□□□ -1.54
RPP0YLR340W MSD1P15179 658 aaKnown RBP5.42□□□□□ -1.54
RPP0YLR340W KIN82P25341 720 aa5.42□□□□□ -1.54
RPP0YLR340W SMY2P32909 740 aaKnown RBP5.42□□□□□ -1.54
RPP0YLR340W MET1P36150 593 aa5.42□□□□□ -1.54
RPP0YLR340W NMD2P38798 1089 aaKnown RBP5.42□□□□□ -1.54
RPP0YLR340W HUL4P40985 892 aa5.42□□□□□ -1.54
RPP0YLR340W RPA14P50106 137 aa5.42□□□□□ -1.54
RPP0YLR340W FMS1P50264 508 aa5.42□□□□□ -1.54
RPP0YLR340W YRB30P53107 440 aaPredicted RBP5.42□□□□□ -1.54
RPP0YLR340W LSB1P53281 241 aa5.42□□□□□ -1.54
RPP0YLR340W MRPS35P53292 345 aa5.42□□□□□ -1.54
RPP0YLR340W YNR021WP53723 404 aaKnown RBP5.42□□□□□ -1.54
RPP0YLR340W TBF1Q02457 562 aa5.42□□□□□ -1.54
RPP0YLR340W SYH1Q02875 849 aaKnown RBP5.42□□□□□ -1.54
RPP0YLR340W PNG1Q02890 363 aa5.42□□□□□ -1.54
RPP0YLR340W LCD1Q04377 747 aa5.42□□□□□ -1.54
RPP0YLR340W YPR097WQ06839 1073 aa5.42□□□□□ -1.54
RPP0YLR340W YDL206WQ12424 762 aa5.42□□□□□ -1.54
RPP0YLR340W RIF1P29539 1916 aa5.41□□□□□ -1.54
RPP0YLR340W OPI1P21957 404 aa5.41□□□□□ -1.54
RPP0YLR340W PPZ1P26570 692 aa5.41□□□□□ -1.54
RPP0YLR340W RPL8BP29453 256 aaKnown RBP5.41□□□□□ -1.54
RPP0YLR340W ANP1P32629 500 aa5.41□□□□□ -1.54
RPP0YLR340W UBP15P50101 1230 aa5.41□□□□□ -1.54
RPP0YLR340W RPT6Q01939 405 aaKnown RBP5.41□□□□□ -1.54
RPP0YLR340W MMR1Q06324 491 aa5.41□□□□□ -1.54
RPP0YLR340W ALR1Q08269 859 aa5.41□□□□□ -1.54
RPP0YLR340W PRC1P00729 532 aa5.4□□□□□ -1.54
RPP0YLR340W TRM1P15565 570 aaKnown RBP5.4□□□□□ -1.54
RPP0YLR340W KTR1P27810 393 aaKnown RBP5.4□□□□□ -1.54
RPP0YLR340W FAF1P40546 346 aaPredicted RBP5.4□□□□□ -1.54
RPP0YLR340W YJR115WP47152 169 aa5.4□□□□□ -1.54
RPP0YLR340W CUS1Q02554 436 aaPredicted RBP5.4□□□□□ -1.54
RPP0YLR340W SPO71Q03868 1245 aa5.4□□□□□ -1.54
RPP0YLR340W MAG2Q06436 670 aaKnown RBP5.4□□□□□ -1.54
RPP0YLR340W CLF1Q12309 687 aaPredicted RBP5.4□□□□□ -1.54
RPP0YLR340W CCH1P50077 2039 aa5.4□□□□□ -1.55
RPP0YLR340W BEM2P39960 2167 aaKnown RBP5.39□□□□□ -1.55
RPP0YLR340W SRP54P20424 541 aaKnown RBP5.39□□□□□ -1.55
RPP0YLR340W ESS1P22696 170 aa5.39□□□□□ -1.55
RPP0YLR340W MBR1P23493 339 aa5.39□□□□□ -1.55
RPP0YLR340W MSS51P32335 436 aa5.39□□□□□ -1.55
RPP0YLR340W SUV3P32580 737 aa5.39□□□□□ -1.55
RPP0YLR340W UGA4P32837 571 aa5.39□□□□□ -1.55
RPP0YLR340W SLX1P38324 304 aa5.39□□□□□ -1.55
RPP0YLR340W HDA1P53973 706 aa5.39□□□□□ -1.55
RPP0YLR340W YDR444WQ04093 687 aa5.39□□□□□ -1.55
RPP0YLR340W PUF6Q04373 656 aaKnown RBP5.39□□□□□ -1.55
RPP0YLR340W MYO5Q04439 1219 aaKnown RBP5.39□□□□□ -1.55
RPP0YLR340W BRE1Q07457 700 aaKnown RBP5.39□□□□□ -1.55
RPP0YLR340W IRC10Q08118 586 aa5.39□□□□□ -1.55
RPP0YLR340W KIP2P28743 706 aa5.38□□□□□ -1.55
RPP0YLR340W SEC20P28791 383 aa5.38□□□□□ -1.55
RPP0YLR340W DRE2P36152 348 aa5.38□□□□□ -1.55
RPP0YLR340W APN2P38207 520 aa5.38□□□□□ -1.55
RPP0YLR340W YTA12P40341 825 aa5.38□□□□□ -1.55
RPP0YLR340W ECM16Q04217 1267 aaKnown RBP5.38□□□□□ -1.55
RPP0YLR340W YLR455WQ06188 304 aa5.38□□□□□ -1.55
RPP0YLR340W ACC1Q00955 2233 aaKnown RBP5.38□□□□□ -1.55
RPP0YLR340W YLR422WQ06409 1932 aa5.37□□□□□ -1.55
RPP0YLR340W CAN1P04817 590 aa5.37□□□□□ -1.55
RPP0YLR340W CUP1-1P0CX80 61 aa5.37□□□□□ -1.55
RPP0YLR340W CUP1-2P0CX81 61 aa5.37□□□□□ -1.55
RPP0YLR340W RME1P32338 300 aaKnown RBP5.37□□□□□ -1.55
RPP0YLR340W TVP38P36164 337 aa5.37□□□□□ -1.55
RPP0YLR340W HMF1P40037 129 aaKnown RBP5.37□□□□□ -1.55
RPP0YLR340W CSM2P40465 213 aa5.37□□□□□ -1.55
RPP0YLR340W SAD1P43589 448 aa5.37□□□□□ -1.55
RPP0YLR340W MDM1Q01846 1127 aa5.37□□□□□ -1.55
RPP0YLR340W PIG1Q06216 648 aa5.37□□□□□ -1.55
RPP0YLR340W GPI13Q07830 1017 aa5.37□□□□□ -1.55
RPP0YLR340W SSF2Q12153 453 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms