RNA–Protein interactions for RNA: YLR320W

MMS22, Transcript of Subunit of E3 ubiquitin ligase complex involved in replication repair, yeast

Gene MMS22, Length 4,365 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MMS22	YLR320W	MSB3	P48566	633 aa	Predicted RBP	2.75	□□□□□ -1.97
MMS22	YLR320W	MET14	Q02196	202 aa		2.75	□□□□□ -1.97
MMS22	YLR320W	RSC4	Q02206	625 aa		2.75	□□□□□ -1.97
MMS22	YLR320W	MCM1	P11746	286 aa		2.75	□□□□□ -1.97
MMS22	YLR320W	MTR4	P47047	1073 aa	Known RBP	2.75	□□□□□ -1.97
MMS22	YLR320W	RSB1	Q08417	382 aa		2.75	□□□□□ -1.97
MMS22	YLR320W	GLO4	Q12320	285 aa		2.75	□□□□□ -1.97
MMS22	YLR320W	CMP2	P14747	604 aa		2.75	□□□□□ -1.97
MMS22	YLR320W	RPN12	P32496	274 aa		2.75	□□□□□ -1.97
MMS22	YLR320W	AMN1	P38285	549 aa	Predicted RBP	2.75	□□□□□ -1.97
MMS22	YLR320W	TAT2	P38967	592 aa		2.75	□□□□□ -1.97
MMS22	YLR320W	HFD1	Q04458	532 aa		2.75	□□□□□ -1.97
MMS22	YLR320W	PRP9	P19736	530 aa	Known RBP	2.75	□□□□□ -1.97
MMS22	YLR320W	PRP5	P21372	849 aa	Predicted RBP	2.75	□□□□□ -1.97
MMS22	YLR320W	AFT1	P22149	690 aa		2.75	□□□□□ -1.97
MMS22	YLR320W	GSY1	P23337	708 aa		2.75	□□□□□ -1.97
MMS22	YLR320W	YJL049W	P47048	450 aa		2.75	□□□□□ -1.97
MMS22	YLR320W	GCV2	P49095	1034 aa		2.75	□□□□□ -1.97
MMS22	YLR320W	HEH2	Q03281	663 aa		2.75	□□□□□ -1.97
MMS22	YLR320W	BI4	P03879	638 aa		2.74	□□□□□ -1.97
MMS22	YLR320W	WHI3	P34761	661 aa	Known RBP	2.74	□□□□□ -1.97
MMS22	YLR320W	ALG14	P38242	237 aa		2.74	□□□□□ -1.97
MMS22	YLR320W	ENP1	P38333	483 aa	Known RBP	2.74	□□□□□ -1.97
MMS22	YLR320W	EAF5	P39995	279 aa		2.74	□□□□□ -1.97
MMS22	YLR320W	SIP5	P40210	489 aa	Known RBP	2.74	□□□□□ -1.97
MMS22	YLR320W	GPG1	P53130	126 aa		2.74	□□□□□ -1.97
MMS22	YLR320W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	2.74	□□□□□ -1.97	not detected
MMS22	YLR320W	RPS21B	Q3E754	87 aa	Known RBP	2.74	□□□□□ -1.97
MMS22	YLR320W	SRD1	P09007	221 aa		2.74	□□□□□ -1.97
MMS22	YLR320W	RPS21A	P0C0V8	87 aa	Known RBP	2.74	□□□□□ -1.97
MMS22	YLR320W	NAM8	Q00539	523 aa	Known RBP	2.74	□□□□□ -1.97
MMS22	YLR320W	VPS30	Q02948	557 aa		2.74	□□□□□ -1.97
MMS22	YLR320W	RSC3	Q06639	885 aa		2.74	□□□□□ -1.97
MMS22	YLR320W	KIP1	P28742	1111 aa		2.74	□□□□□ -1.97
MMS22	YLR320W	POA1	P38218	177 aa		2.74	□□□□□ -1.97
MMS22	YLR320W	GGA2	P38817	585 aa	Known RBP	2.74	□□□□□ -1.97
MMS22	YLR320W	HRQ1	Q05549	1077 aa		2.74	□□□□□ -1.97
MMS22	YLR320W	TMA46	Q12000	345 aa	Known RBP	2.74	□□□□□ -1.97
MMS22	YLR320W	YPR027C	Q12079	277 aa		2.74	□□□□□ -1.97
MMS22	YLR320W	NAM7	P30771	971 aa	Known RBP	2.73	□□□□□ -1.97
MMS22	YLR320W	MDJ1	P35191	511 aa		2.73	□□□□□ -1.97
MMS22	YLR320W	YAR028W	P39548	234 aa		2.73	□□□□□ -1.97
MMS22	YLR320W	NPY1	P53164	384 aa		2.73	□□□□□ -1.97
MMS22	YLR320W	GLN4	P13188	809 aa	Known RBP	2.73	□□□□□ -1.97
MMS22	YLR320W	PRO1	P32264	428 aa		2.73	□□□□□ -1.97
MMS22	YLR320W	YJL045W	P47052	634 aa		2.73	□□□□□ -1.97
MMS22	YLR320W	ASM4	Q05166	528 aa		2.73	□□□□□ -1.97
MMS22	YLR320W	COG4	Q06096	861 aa		2.73	□□□□□ -1.97
MMS22	YLR320W	ADE8	P04161	214 aa		2.73	□□□□□ -1.97
MMS22	YLR320W	AGP1	P25376	633 aa		2.73	□□□□□ -1.97
MMS22	YLR320W	MPH2	P0CD99	609 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	SEC65	P29478	273 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	DBF20	P32328	564 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	AFG3	P39925	761 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	ROG3	P43602	733 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	CTH1	P47976	325 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	YDR514C	Q04408	483 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	OMS1	Q06668	471 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	UTP4	Q06679	776 aa	Known RBP	2.72	□□□□□ -1.97
MMS22	YLR320W	GPT2	P36148	743 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	KRI1	P42846	591 aa	Known RBP	2.72	□□□□□ -1.97
MMS22	YLR320W	VTC4	P47075	721 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	MTQ2	Q03920	221 aa	Predicted RBP	2.72	□□□□□ -1.97
MMS22	YLR320W	YLR257W	Q06146	321 aa	Known RBP	2.72	□□□□□ -1.97
MMS22	YLR320W	STP4	Q07351	490 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	DPS1	P04802	557 aa	Known RBP	2.72	□□□□□ -1.97
MMS22	YLR320W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
MMS22	YLR320W	MTC2	P34246	357 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	YBR287W	P38355	427 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	RPN10	P38886	268 aa	Known RBP	2.72	□□□□□ -1.97
MMS22	YLR320W	YGR053C	P53234	283 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	GAL1	P04385	528 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	MSH1	P25846	959 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	SRP101	P32916	621 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	NIC96	P34077	839 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	DOT5	P40553	215 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	LYS14	P40971	790 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	COG6	P53959	839 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	STP3	Q05937	343 aa		2.72	□□□□□ -1.97
MMS22	YLR320W	ADD66	P36040	267 aa		2.71	□□□□□ -1.98
MMS22	YLR320W	GIP2	P40036	548 aa		2.71	□□□□□ -1.98
MMS22	YLR320W	YIL108W	P40483	696 aa	Known RBP	2.71	□□□□□ -1.98
MMS22	YLR320W	IML2	P47031	731 aa		2.71	□□□□□ -1.98
MMS22	YLR320W	MSN5	P52918	1224 aa		2.71	□□□□□ -1.98
MMS22	YLR320W	HAS1	Q03532	505 aa	Known RBP	2.71	□□□□□ -1.98
MMS22	YLR320W	SSL1	Q04673	461 aa	Predicted RBP	2.71	□□□□□ -1.98
MMS22	YLR320W	INP51	P40559	946 aa	Known RBP	2.71	□□□□□ -1.98
MMS22	YLR320W	YNR014W	P53719	212 aa		2.71	□□□□□ -1.98
MMS22	YLR320W	FUS1	P11710	512 aa		2.71	□□□□□ -1.98
MMS22	YLR320W	KCC4	P25389	1037 aa		2.71	□□□□□ -1.98
MMS22	YLR320W	RFC1	P38630	861 aa	Known RBP	2.71	□□□□□ -1.98
MMS22	YLR320W	CNN1	P43618	361 aa		2.71	□□□□□ -1.98
MMS22	YLR320W	PMT3	P47190	753 aa		2.71	□□□□□ -1.98
MMS22	YLR320W	LCL3	P53153	274 aa		2.71	□□□□□ -1.98
MMS22	YLR320W	YGR045C	P53229	120 aa		2.71	□□□□□ -1.98
MMS22	YLR320W	UTP8	P53276	713 aa	Known RBP	2.71	□□□□□ -1.98
MMS22	YLR320W	YDR338C	Q05497	695 aa		2.71	□□□□□ -1.98
MMS22	YLR320W	PHM6	Q05637	104 aa		2.71	□□□□□ -1.98
MMS22	YLR320W	XYL2	Q07993	356 aa		2.71	□□□□□ -1.98
MMS22	YLR320W	RMP1	Q12530	201 aa		2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 99.7 ms