RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W TAF13P11747 167 aa11.1□□□□□ -0.63
SHH4YLR164W PFK1P16861 987 aaKnown RBP11.1□□□□□ -0.63
SHH4YLR164W CLB5P30283 435 aa11.1□□□□□ -0.63
SHH4YLR164W PGM2P37012 569 aaKnown RBP11.1□□□□□ -0.63
SHH4YLR164W NUP82P40368 713 aa11.1□□□□□ -0.63
SHH4YLR164W AIP1P46680 615 aaKnown RBP11.1□□□□□ -0.63
SHH4YLR164W ARK1P53974 638 aa11.1□□□□□ -0.63
SHH4YLR164W CRD1Q07560 283 aa11.1□□□□□ -0.63
SHH4YLR164W TIF6Q12522 245 aaKnown RBP11.1□□□□□ -0.63
SHH4YLR164W TY1B-AO13527 1196 aaKnown RBP11.09□□□□□ -0.63
SHH4YLR164W BCD1P38772 366 aa11.09□□□□□ -0.63
SHH4YLR164W BIM1P40013 344 aa11.09□□□□□ -0.63
SHH4YLR164W FIS1P40515 155 aa11.09□□□□□ -0.63
SHH4YLR164W UBP15P50101 1230 aa11.09□□□□□ -0.63
SHH4YLR164W YLR225CQ05948 407 aaKnown RBP11.09□□□□□ -0.63
SHH4YLR164W SPP382Q06411 708 aaPredicted RBP11.09□□□□□ -0.63
SHH4YLR164W SRD1P09007 221 aa11.08□□□□□ -0.64
SHH4YLR164W YET1P35723 206 aa11.08□□□□□ -0.64
SHH4YLR164W MPE1P35728 441 aaKnown RBP11.08□□□□□ -0.64
SHH4YLR164W ADE17P38009 592 aaKnown RBP11.08□□□□□ -0.64
SHH4YLR164W RSC30P38781 883 aa11.08□□□□□ -0.64
SHH4YLR164W CNM67P53865 581 aaKnown RBP11.08□□□□□ -0.64
SHH4YLR164W TRK2P28584 889 aa11.07□□□□□ -0.64
SHH4YLR164W YKL091CP33324 310 aaKnown RBP11.07□□□□□ -0.64
SHH4YLR164W YEL1P34225 687 aa11.07□□□□□ -0.64
SHH4YLR164W MIC60P36112 540 aa11.07□□□□□ -0.64
SHH4YLR164W SHM1P37292 490 aaPredicted RBP11.07□□□□□ -0.64
SHH4YLR164W ERC1P38767 581 aa11.07□□□□□ -0.64
SHH4YLR164W HUL4P40985 892 aa11.07□□□□□ -0.64
SHH4YLR164W RPS7BP48164 190 aaKnown RBP11.07□□□□□ -0.64
SHH4YLR164W DUS1P53759 423 aaKnown RBP11.07□□□□□ -0.64
SHH4YLR164W EBS1Q03466 884 aaKnown RBP11.07□□□□□ -0.64
SHH4YLR164W TY3A-GQ12173 290 aa11.07□□□□□ -0.64
SHH4YLR164W TY3A-IQ99219 290 aa11.07□□□□□ -0.64
SHH4YLR164W DAL7P21826 554 aa11.06□□□□□ -0.64
SHH4YLR164W MRC1P25588 1096 aa11.06□□□□□ -0.64
SHH4YLR164W TFC4P33339 1025 aa11.06□□□□□ -0.64
SHH4YLR164W UBP5P39944 805 aa11.06□□□□□ -0.64
SHH4YLR164W NBP1P52919 319 aaPredicted RBP11.06□□□□□ -0.64
SHH4YLR164W YAF9P53930 226 aa11.06□□□□□ -0.64
SHH4YLR164W GFD1Q04839 188 aaKnown RBP11.06□□□□□ -0.64
SHH4YLR164W MSC6Q08818 692 aaKnown RBP11.06□□□□□ -0.64
SHH4YLR164W CDC37P06101 506 aaKnown RBP11.05□□□□□ -0.64
SHH4YLR164W RPC25P35718 212 aa11.05□□□□□ -0.64
SHH4YLR164W ATG1P53104 897 aa11.05□□□□□ -0.64
SHH4YLR164W ZPR1P53303 486 aaKnown RBP11.05□□□□□ -0.64
SHH4YLR164W TOF1P53840 1238 aa11.05□□□□□ -0.64
SHH4YLR164W TRM11Q12463 433 aa11.05□□□□□ -0.64
SHH4YLR164W PRE10P21242 288 aaKnown RBP RIP-Chip data11.04□□□□□ -0.64not detected
SHH4YLR164W CDC48P25694 835 aaKnown RBP11.04□□□□□ -0.64
SHH4YLR164W PXL1P36166 706 aa11.04□□□□□ -0.64
SHH4YLR164W FLR1P38124 548 aa11.04□□□□□ -0.64
SHH4YLR164W RPN3P40016 523 aaKnown RBP11.04□□□□□ -0.64
SHH4YLR164W TOS3P43637 560 aa11.04□□□□□ -0.64
SHH4YLR164W HCR1Q05775 265 aaKnown RBP11.04□□□□□ -0.64
SHH4YLR164W YAP7Q08182 245 aa11.04□□□□□ -0.64
SHH4YLR164W TCO89Q08921 799 aa11.04□□□□□ -0.64
SHH4YLR164W SCP160P06105 1222 aaKnown RBP RIP-Chip data11.03□□□□□ -0.64not detected
SHH4YLR164W DED1P06634 604 aaKnown RBP11.03□□□□□ -0.64
SHH4YLR164W RPS6AP0CX37 236 aaKnown RBP11.03□□□□□ -0.64
SHH4YLR164W RPS6BP0CX38 236 aaPredicted RBP11.03□□□□□ -0.64
SHH4YLR164W SEC8P32855 1065 aa11.03□□□□□ -0.64
SHH4YLR164W RGT1P32862 1170 aa11.03□□□□□ -0.64
SHH4YLR164W TVP38P36164 337 aa11.03□□□□□ -0.64
SHH4YLR164W AVT1P47082 602 aa11.03□□□□□ -0.64
SHH4YLR164W STR2P47164 639 aa11.03□□□□□ -0.64
SHH4YLR164W YPL277CQ08989 487 aa11.03□□□□□ -0.64
SHH4YLR164W SEC65P29478 273 aa11.02□□□□□ -0.65
SHH4YLR164W RTT107P38850 1070 aa11.02□□□□□ -0.65
SHH4YLR164W NCS2P53923 493 aaPredicted RBP11.02□□□□□ -0.65
SHH4YLR164W SVF1Q05515 481 aa11.02□□□□□ -0.65
SHH4YLR164W PDC1P06169 563 aaKnown RBP11.01□□□□□ -0.65
SHH4YLR164W OM45P16547 393 aa11.01□□□□□ -0.65
SHH4YLR164W KIN82P25341 720 aa11.01□□□□□ -0.65
SHH4YLR164W BCS1P32839 456 aa11.01□□□□□ -0.65
SHH4YLR164W MIP6P38760 659 aaKnown RBP11.01□□□□□ -0.65
SHH4YLR164W MXR1P40029 184 aa11.01□□□□□ -0.65
SHH4YLR164W MGA2P40578 1113 aa11.01□□□□□ -0.65
SHH4YLR164W YFL034WP43564 1073 aa11.01□□□□□ -0.65
SHH4YLR164W SAD1P43589 448 aa11.01□□□□□ -0.65
SHH4YLR164W PRY3P47033 881 aa11.01□□□□□ -0.65
SHH4YLR164W HUL5P53119 910 aa11.01□□□□□ -0.65
SHH4YLR164W BRE5P53741 515 aaKnown RBP11.01□□□□□ -0.65
SHH4YLR164W ROD1Q02805 837 aa11.01□□□□□ -0.65
SHH4YLR164W GPI13Q07830 1017 aa11.01□□□□□ -0.65
SHH4YLR164W TCP1P12612 559 aaKnown RBP11□□□□□ -0.65
SHH4YLR164W POX1P13711 748 aa11□□□□□ -0.65
SHH4YLR164W YEL025CP39991 1188 aa11□□□□□ -0.65
SHH4YLR164W HMF1P40037 129 aaKnown RBP11□□□□□ -0.65
SHH4YLR164W CWC2Q12046 339 aaPredicted RBP11□□□□□ -0.65
SHH4YLR164W SRF1Q12516 437 aa11□□□□□ -0.65
SHH4YLR164W PHO13P19881 312 aa10.99□□□□□ -0.65
SHH4YLR164W MSH3P25336 1018 aa10.99□□□□□ -0.65
SHH4YLR164W KSP1P38691 1029 aaKnown RBP10.99□□□□□ -0.65
SHH4YLR164W CTM1P38818 585 aa10.99□□□□□ -0.65
SHH4YLR164W SPT8P38915 602 aa10.99□□□□□ -0.65
SHH4YLR164W TFG2P41896 400 aaPredicted RBP10.99□□□□□ -0.65
SHH4YLR164W VPS53P47061 822 aa10.99□□□□□ -0.65
SHH4YLR164W SEC5P89102 971 aa10.99□□□□□ -0.65
SHH4YLR164W COQ9Q05779 260 aa10.99□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms