RNA–Protein interactions for RNA: YGR081C

SLX9, Transcript of Protein required for pre-rRNA processing, yeast

Gene SLX9, Length 633 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX9	YGR081C	UBP5	P39944	805 aa		4.67	□□□□□ -1.66
SLX9	YGR081C	RRT14	P40470	206 aa		4.67	□□□□□ -1.66
SLX9	YGR081C	RIM8	P53179	542 aa		4.67	□□□□□ -1.66
SLX9	YGR081C	SGD1	Q06132	899 aa		4.67	□□□□□ -1.66
SLX9	YGR081C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
SLX9	YGR081C	HFM1	P51979	1187 aa		4.66	□□□□□ -1.66
SLX9	YGR081C	RSM24	Q03976	319 aa		4.66	□□□□□ -1.66
SLX9	YGR081C	HRQ1	Q05549	1077 aa		4.66	□□□□□ -1.66
SLX9	YGR081C	YPL277C	Q08989	487 aa		4.66	□□□□□ -1.66
SLX9	YGR081C	GAL10	P04397	699 aa		4.65	□□□□□ -1.67
SLX9	YGR081C	RPS13	P05756	151 aa	Known RBP	4.65	□□□□□ -1.67
SLX9	YGR081C	CMP2	P14747	604 aa		4.65	□□□□□ -1.67
SLX9	YGR081C	YKL151C	P36059	337 aa		4.65	□□□□□ -1.67
SLX9	YGR081C	MBP1	P39678	833 aa		4.65	□□□□□ -1.67
SLX9	YGR081C	SNF7	P39929	240 aa	Known RBP	4.65	□□□□□ -1.67
SLX9	YGR081C	KRI1	P42846	591 aa	Known RBP	4.65	□□□□□ -1.67
SLX9	YGR081C	MTC3	P53077	123 aa		4.65	□□□□□ -1.67
SLX9	YGR081C	SHE9	Q04172	456 aa		4.65	□□□□□ -1.67
SLX9	YGR081C	THS1	P04801	734 aa	Known RBP	4.64	□□□□□ -1.67
SLX9	YGR081C	KIN2	P13186	1147 aa	Known RBP	4.64	□□□□□ -1.67
SLX9	YGR081C	APL1	P27351	700 aa		4.64	□□□□□ -1.67
SLX9	YGR081C	VBA5	P36172	582 aa		4.64	□□□□□ -1.67
SLX9	YGR081C	LAM1	P38851	1228 aa		4.64	□□□□□ -1.67
SLX9	YGR081C	SPF1	P39986	1215 aa	Known RBP	4.64	□□□□□ -1.67
SLX9	YGR081C	GCN5	Q03330	439 aa		4.64	□□□□□ -1.67
SLX9	YGR081C	PLB2	Q03674	706 aa		4.64	□□□□□ -1.67
SLX9	YGR081C	XYL2	Q07993	356 aa		4.64	□□□□□ -1.67
SLX9	YGR081C	SSF2	Q12153	453 aa	Predicted RBP	4.64	□□□□□ -1.67
SLX9	YGR081C	MEF2	P39677	819 aa		4.63	□□□□□ -1.67
SLX9	YGR081C	MSC2	Q03455	724 aa		4.63	□□□□□ -1.67
SLX9	YGR081C	ROT1	Q03691	256 aa		4.63	□□□□□ -1.67
SLX9	YGR081C	YLL058W	Q12198	575 aa		4.63	□□□□□ -1.67
SLX9	YGR081C	CDC12	P32468	407 aa	Known RBP	4.62	□□□□□ -1.67
SLX9	YGR081C	TOD6	P34219	525 aa		4.62	□□□□□ -1.67
SLX9	YGR081C	FLR1	P38124	548 aa		4.62	□□□□□ -1.67
SLX9	YGR081C	GIC1	P38785	314 aa		4.62	□□□□□ -1.67
SLX9	YGR081C	DUS4	Q06063	367 aa		4.62	□□□□□ -1.67
SLX9	YGR081C	MDM38	Q08179	573 aa		4.62	□□□□□ -1.67
SLX9	YGR081C	YOR352W	Q08816	343 aa		4.62	□□□□□ -1.67
SLX9	YGR081C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SLX9	YGR081C	CDC6	P09119	513 aa		4.61	□□□□□ -1.67
SLX9	YGR081C	MRP8	P35719	219 aa		4.61	□□□□□ -1.67
SLX9	YGR081C	NPP2	P39997	493 aa		4.61	□□□□□ -1.67
SLX9	YGR081C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
SLX9	YGR081C	SPT20	P50875	604 aa		4.61	□□□□□ -1.67
SLX9	YGR081C	TDA5	Q06417	326 aa	Known RBP	4.61	□□□□□ -1.67
SLX9	YGR081C	ESC8	Q08119	714 aa		4.61	□□□□□ -1.67
SLX9	YGR081C	STE5	P32917	917 aa		4.6	□□□□□ -1.67
SLX9	YGR081C	YAP1801	P38856	637 aa		4.6	□□□□□ -1.67
SLX9	YGR081C	TAF1	P46677	1066 aa		4.6	□□□□□ -1.67
SLX9	YGR081C	NOP7	P53261	605 aa	Known RBP	4.6	□□□□□ -1.67
SLX9	YGR081C	SRT1	Q03175	343 aa		4.6	□□□□□ -1.67
SLX9	YGR081C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
SLX9	YGR081C	YCR015C	P25616	317 aa		4.59	□□□□□ -1.67
SLX9	YGR081C	FUN30	P31380	1131 aa		4.59	□□□□□ -1.67
SLX9	YGR081C	DOM34	P33309	386 aa		4.59	□□□□□ -1.67
SLX9	YGR081C	TAT2	P38967	592 aa		4.59	□□□□□ -1.67
SLX9	YGR081C	MND2	P40577	368 aa		4.59	□□□□□ -1.67
SLX9	YGR081C	VPS62	P53285	467 aa		4.59	□□□□□ -1.67
SLX9	YGR081C	DUS3	Q06053	668 aa	Known RBP	4.59	□□□□□ -1.67
SLX9	YGR081C	CDC20	P26309	610 aa		4.58	□□□□□ -1.68
SLX9	YGR081C	PBY1	P38254	753 aa		4.58	□□□□□ -1.68
SLX9	YGR081C	SAH1	P39954	449 aa	Known RBP	4.58	□□□□□ -1.68
SLX9	YGR081C	PFD1	P46988	109 aa		4.58	□□□□□ -1.68
SLX9	YGR081C	CLU1	Q03690	1277 aa	Known RBP	4.58	□□□□□ -1.68
SLX9	YGR081C	GPB1	Q08886	897 aa		4.58	□□□□□ -1.68
SLX9	YGR081C	HMI1	Q12039	706 aa		4.58	□□□□□ -1.68
SLX9	YGR081C	OSW2	Q12202	724 aa		4.58	□□□□□ -1.68
SLX9	YGR081C	IRR1	P40541	1150 aa		4.57	□□□□□ -1.68
SLX9	YGR081C	GTF1	P53260	183 aa	Predicted RBP	4.57	□□□□□ -1.68
SLX9	YGR081C	PBP1	P53297	722 aa	Known RBP	4.57	□□□□□ -1.68
SLX9	YGR081C	SRP1	Q02821	542 aa	Known RBP	4.57	□□□□□ -1.68
SLX9	YGR081C	YAP6	Q03935	383 aa		4.57	□□□□□ -1.68
SLX9	YGR081C	CDA1	Q06702	301 aa		4.57	□□□□□ -1.68
SLX9	YGR081C	ACK1	Q07622	623 aa	Predicted RBP	4.57	□□□□□ -1.68
SLX9	YGR081C	SRP101	P32916	621 aa		4.56	□□□□□ -1.68
SLX9	YGR081C	AFR1	P33304	620 aa		4.56	□□□□□ -1.68
SLX9	YGR081C	YKL222C	P35995	705 aa		4.56	□□□□□ -1.68
SLX9	YGR081C	ECM21	P38167	1117 aa	Known RBP	4.56	□□□□□ -1.68
SLX9	YGR081C	YBR184W	P38299	523 aa		4.56	□□□□□ -1.68
SLX9	YGR081C	GIP4	P39732	760 aa		4.56	□□□□□ -1.68
SLX9	YGR081C	ZRG8	P40021	1076 aa		4.56	□□□□□ -1.68
SLX9	YGR081C	GCV2	P49095	1034 aa		4.56	□□□□□ -1.68
SLX9	YGR081C	YDR306C	Q06640	478 aa		4.56	□□□□□ -1.68
SLX9	YGR081C	RXT3	Q07458	294 aa		4.56	□□□□□ -1.68
SLX9	YGR081C	ADY3	Q07732	790 aa		4.56	□□□□□ -1.68
SLX9	YGR081C	WRS1	Q12109	432 aa	Known RBP	4.56	□□□□□ -1.68
SLX9	YGR081C	YLR358C	O13565	187 aa		4.55	□□□□□ -1.68
SLX9	YGR081C	NPP1	P25353	742 aa		4.55	□□□□□ -1.68
SLX9	YGR081C	GRX1	P25373	110 aa	Known RBP	4.55	□□□□□ -1.68
SLX9	YGR081C	EMC1	P25574	760 aa		4.55	□□□□□ -1.68
SLX9	YGR081C	CTS1	P29029	562 aa		4.55	□□□□□ -1.68
SLX9	YGR081C	HBS1	P32769	611 aa	Known RBP	4.55	□□□□□ -1.68
SLX9	YGR081C	TSL1	P38427	1098 aa	Known RBP	4.55	□□□□□ -1.68
SLX9	YGR081C	SIT1	P39980	628 aa		4.55	□□□□□ -1.68
SLX9	YGR081C	YER158C	P40095	573 aa		4.55	□□□□□ -1.68
SLX9	YGR081C	GYP7	P48365	746 aa		4.55	□□□□□ -1.68
SLX9	YGR081C	SFB2	P53953	876 aa		4.55	□□□□□ -1.68
SLX9	YGR081C	NAN1	Q02931	896 aa	Known RBP	4.55	□□□□□ -1.68
SLX9	YGR081C	TPO1	Q07824	586 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms