RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W YGR130CP53278 816 aa5.32□□□□□ -1.56
PRP18YGR006W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
PRP18YGR006W DUS3Q06053 668 aaKnown RBP5.32□□□□□ -1.56
PRP18YGR006W YDR306CQ06640 478 aa5.32□□□□□ -1.56
PRP18YGR006W RSC58Q07979 502 aa5.32□□□□□ -1.56
PRP18YGR006W CIT2P08679 460 aa5.31□□□□□ -1.56
PRP18YGR006W PRO1P32264 428 aa5.31□□□□□ -1.56
PRP18YGR006W UGA2P38067 497 aa5.31□□□□□ -1.56
PRP18YGR006W ALO1P54783 526 aaKnown RBP5.31□□□□□ -1.56
PRP18YGR006W UBX5Q06682 500 aa5.31□□□□□ -1.56
PRP18YGR006W YDL124WQ07551 312 aaKnown RBP5.31□□□□□ -1.56
PRP18YGR006W RCL1Q08096 367 aaPredicted RBP5.31□□□□□ -1.56
PRP18YGR006W PPM2Q08282 695 aa5.31□□□□□ -1.56
PRP18YGR006W CYC7P00045 113 aa5.3□□□□□ -1.56
PRP18YGR006W ADP1P25371 1049 aa5.3□□□□□ -1.56
PRP18YGR006W PPH3P32345 308 aa5.3□□□□□ -1.56
PRP18YGR006W AAR2P32357 355 aaPredicted RBP5.3□□□□□ -1.56
PRP18YGR006W CCC2P38995 1004 aa5.3□□□□□ -1.56
PRP18YGR006W RNH70P53331 553 aa5.3□□□□□ -1.56
PRP18YGR006W MED7Q08278 222 aa5.3□□□□□ -1.56
PRP18YGR006W YLL058WQ12198 575 aa5.3□□□□□ -1.56
PRP18YGR006W ADE8P04161 214 aa5.29□□□□□ -1.56
PRP18YGR006W CAN1P04817 590 aa5.29□□□□□ -1.56
PRP18YGR006W PPG1P32838 368 aa5.29□□□□□ -1.56
PRP18YGR006W PTC7P38797 343 aa5.29□□□□□ -1.56
PRP18YGR006W SAH1P39954 449 aaKnown RBP5.29□□□□□ -1.56
PRP18YGR006W SIT1P39980 628 aa5.29□□□□□ -1.56
PRP18YGR006W NUP82P40368 713 aa5.29□□□□□ -1.56
PRP18YGR006W RRT14P40470 206 aa5.29□□□□□ -1.56
PRP18YGR006W YFL054CP43549 646 aa5.29□□□□□ -1.56
PRP18YGR006W TAF8Q03750 510 aa5.29□□□□□ -1.56
PRP18YGR006W ATG13Q06628 738 aa5.29□□□□□ -1.56
PRP18YGR006W YLR125WQ12138 136 aa5.29□□□□□ -1.56
PRP18YGR006W GLT1Q12680 2145 aaKnown RBP5.29□□□□□ -1.56
PRP18YGR006W TRP3P00937 484 aa5.28□□□□□ -1.56
PRP18YGR006W GCD1P09032 578 aaPredicted RBP5.28□□□□□ -1.56
PRP18YGR006W CDC12P32468 407 aaKnown RBP5.28□□□□□ -1.56
PRP18YGR006W HBS1P32769 611 aaKnown RBP5.28□□□□□ -1.56
PRP18YGR006W AIM26P32858 118 aa5.28□□□□□ -1.56
PRP18YGR006W RRP14P36080 434 aaKnown RBP5.28□□□□□ -1.56
PRP18YGR006W GTS1P40956 396 aa5.28□□□□□ -1.56
PRP18YGR006W SSY1Q03770 852 aa5.28□□□□□ -1.56
PRP18YGR006W BI4P03879 638 aa5.27□□□□□ -1.57
PRP18YGR006W SPS1P08458 490 aa5.27□□□□□ -1.57
PRP18YGR006W TIM23P32897 222 aa5.27□□□□□ -1.57
PRP18YGR006W MAC1P35192 417 aa5.27□□□□□ -1.57
PRP18YGR006W YKR073CP36153 106 aa5.27□□□□□ -1.57
PRP18YGR006W OMA1P36163 345 aa5.27□□□□□ -1.57
PRP18YGR006W FOL2P51601 243 aaKnown RBP5.27□□□□□ -1.57
PRP18YGR006W ENV11P53246 860 aa5.27□□□□□ -1.57
PRP18YGR006W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57 RIP-Chip
PRP18YGR006W HRQ1Q05549 1077 aa5.27□□□□□ -1.57
PRP18YGR006W HBN1Q96VH4 193 aa5.27□□□□□ -1.57
PRP18YGR006W PHO8P11491 566 aa5.26□□□□□ -1.57
PRP18YGR006W YKL151CP36059 337 aa5.26□□□□□ -1.57
PRP18YGR006W SEC26P41810 973 aaKnown RBP5.26□□□□□ -1.57
PRP18YGR006W SVS1Q12254 260 aa5.26□□□□□ -1.57
PRP18YGR006W ACE2P21192 770 aa5.25□□□□□ -1.57
PRP18YGR006W DOM34P33309 386 aa5.25□□□□□ -1.57
PRP18YGR006W YRO2P38079 344 aa5.25□□□□□ -1.57
PRP18YGR006W TOS1P38288 455 aa5.25□□□□□ -1.57
PRP18YGR006W ALG12P53730 551 aa5.25□□□□□ -1.57
PRP18YGR006W LCD1Q04377 747 aa5.25□□□□□ -1.57
PRP18YGR006W MDM38Q08179 573 aa5.25□□□□□ -1.57
PRP18YGR006W MET6P05694 767 aaKnown RBP5.24□□□□□ -1.57
PRP18YGR006W FUN30P31380 1131 aa5.24□□□□□ -1.57
PRP18YGR006W PET10P36139 283 aa5.24□□□□□ -1.57
PRP18YGR006W YKR078WP36158 585 aaKnown RBP5.24□□□□□ -1.57
PRP18YGR006W YBR284WP38150 797 aa5.24□□□□□ -1.57
PRP18YGR006W RFC5P38251 354 aa5.24□□□□□ -1.57
PRP18YGR006W RTA1P53047 317 aa5.24□□□□□ -1.57
PRP18YGR006W MTC3P53077 123 aa5.24□□□□□ -1.57
PRP18YGR006W ORC3P54790 616 aa5.24□□□□□ -1.57
PRP18YGR006W DOS2P54858 310 aa5.24□□□□□ -1.57
PRP18YGR006W POB3Q04636 552 aaKnown RBP5.24□□□□□ -1.57
PRP18YGR006W TOM70P07213 617 aaKnown RBP5.23□□□□□ -1.57
PRP18YGR006W PUB1P32588 453 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
PRP18YGR006W BET3P36149 193 aa5.23□□□□□ -1.57
PRP18YGR006W UBP6P43593 499 aaKnown RBP5.23□□□□□ -1.57
PRP18YGR006W CCM1P48237 864 aaPredicted RBP5.23□□□□□ -1.57
PRP18YGR006W GYP7P48365 746 aa5.23□□□□□ -1.57
PRP18YGR006W NRD1P53617 575 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
PRP18YGR006W SDH1Q00711 640 aa5.23□□□□□ -1.57
PRP18YGR006W SRT1Q03175 343 aa5.23□□□□□ -1.57
PRP18YGR006W YPR071WQ12346 211 aa5.23□□□□□ -1.57
PRP18YGR006W LPX1Q12405 387 aaKnown RBP5.23□□□□□ -1.57
PRP18YGR006W ERR1P0CX10 437 aa5.22□□□□□ -1.57
PRP18YGR006W ERR2P0CX11 437 aa5.22□□□□□ -1.57
PRP18YGR006W KIN2P13186 1147 aaKnown RBP5.22□□□□□ -1.57
PRP18YGR006W THI4P32318 326 aa5.22□□□□□ -1.57
PRP18YGR006W RPC82P32349 654 aa5.22□□□□□ -1.57
PRP18YGR006W LIP5P32875 414 aa5.22□□□□□ -1.57
PRP18YGR006W BRN1P38170 754 aa5.22□□□□□ -1.57
PRP18YGR006W INP52P50942 1183 aa5.22□□□□□ -1.57
PRP18YGR006W RSM24Q03976 319 aa5.22□□□□□ -1.57
PRP18YGR006W OSW2Q12202 724 aa5.22□□□□□ -1.57
PRP18YGR006W TOP3P13099 656 aa5.21□□□□□ -1.58
PRP18YGR006W MSD1P15179 658 aaKnown RBP5.21□□□□□ -1.58
PRP18YGR006W REC104P33323 182 aa5.21□□□□□ -1.58
PRP18YGR006W GIC1P38785 314 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms