RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W PFK1P16861 987 aaKnown RBP6.08□□□□□ -1.44
SHE10YGL228W CLB5P30283 435 aa6.08□□□□□ -1.44
SHE10YGL228W PSO2P30620 661 aa6.08□□□□□ -1.44
SHE10YGL228W SUV3P32580 737 aa6.08□□□□□ -1.44
SHE10YGL228W PGM1P33401 570 aaKnown RBP6.08□□□□□ -1.44
SHE10YGL228W MIC60P36112 540 aa6.08□□□□□ -1.44
SHE10YGL228W SPR3P41901 512 aa6.08□□□□□ -1.44
SHE10YGL228W YMR321CQ04898 105 aa6.08□□□□□ -1.44
SHE10YGL228W CDC19P00549 500 aaKnown RBP6.07□□□□□ -1.44
SHE10YGL228W PRP22P24384 1145 aaKnown RBP6.07□□□□□ -1.44
SHE10YGL228W DBP7P36120 742 aaKnown RBP6.07□□□□□ -1.44
SHE10YGL228W ADE17P38009 592 aaKnown RBP6.07□□□□□ -1.44
SHE10YGL228W AIP1P46680 615 aaKnown RBP6.07□□□□□ -1.44
SHE10YGL228W SCS3P53012 380 aa6.07□□□□□ -1.44
SHE10YGL228W CNM67P53865 581 aaKnown RBP6.07□□□□□ -1.44
SHE10YGL228W SPP382Q06411 708 aaPredicted RBP6.07□□□□□ -1.44
SHE10YGL228W CRD1Q07560 283 aa6.07□□□□□ -1.44
SHE10YGL228W NCR1Q12200 1170 aa6.07□□□□□ -1.44
SHE10YGL228W TY1B-AO13527 1196 aaKnown RBP6.06□□□□□ -1.44
SHE10YGL228W SRD1P09007 221 aa6.06□□□□□ -1.44
SHE10YGL228W YUR1P26725 428 aa6.06□□□□□ -1.44
SHE10YGL228W YKL091CP33324 310 aaKnown RBP6.06□□□□□ -1.44
SHE10YGL228W PGM2P37012 569 aaKnown RBP6.06□□□□□ -1.44
SHE10YGL228W BCD1P38772 366 aa6.06□□□□□ -1.44
SHE10YGL228W RSC30P38781 883 aa6.06□□□□□ -1.44
SHE10YGL228W BIM1P40013 344 aa6.06□□□□□ -1.44
SHE10YGL228W NUP82P40368 713 aa6.06□□□□□ -1.44
SHE10YGL228W FIS1P40515 155 aa6.06□□□□□ -1.44
SHE10YGL228W UBP15P50101 1230 aa6.06□□□□□ -1.44
SHE10YGL228W GFD1Q04839 188 aaKnown RBP6.06□□□□□ -1.44
SHE10YGL228W PHM6Q05637 104 aa6.06□□□□□ -1.44
SHE10YGL228W CDC37P06101 506 aaKnown RBP6.05□□□□□ -1.44
SHE10YGL228W YET1P35723 206 aa6.05□□□□□ -1.44
SHE10YGL228W MPE1P35728 441 aaKnown RBP6.05□□□□□ -1.44
SHE10YGL228W YAF9P53930 226 aa6.05□□□□□ -1.44
SHE10YGL228W ARK1P53974 638 aa6.05□□□□□ -1.44
SHE10YGL228W EBS1Q03466 884 aaKnown RBP6.05□□□□□ -1.44
SHE10YGL228W HCR1Q05775 265 aaKnown RBP6.05□□□□□ -1.44
SHE10YGL228W TY3A-GQ12173 290 aa6.05□□□□□ -1.44
SHE10YGL228W TIF6Q12522 245 aaKnown RBP6.05□□□□□ -1.44
SHE10YGL228W TY3A-IQ99219 290 aa6.05□□□□□ -1.44
SHE10YGL228W MRC1P25588 1096 aa6.05□□□□□ -1.44
SHE10YGL228W TFC4P33339 1025 aa6.05□□□□□ -1.44
SHE10YGL228W YEL1P34225 687 aa6.05□□□□□ -1.44
SHE10YGL228W RPC25P35718 212 aa6.05□□□□□ -1.44
SHE10YGL228W HUL4P40985 892 aa6.05□□□□□ -1.44
SHE10YGL228W TOS3P43637 560 aa6.05□□□□□ -1.44
SHE10YGL228W ZPR1P53303 486 aaKnown RBP6.05□□□□□ -1.44
SHE10YGL228W YLR225CQ05948 407 aaKnown RBP6.05□□□□□ -1.44
SHE10YGL228W LAA1P39526 2014 aa6.04□□□□□ -1.44
SHE10YGL228W DAL7P21826 554 aa6.04□□□□□ -1.44
SHE10YGL228W CDC48P25694 835 aaKnown RBP6.04□□□□□ -1.44
SHE10YGL228W TRK2P28584 889 aa6.04□□□□□ -1.44
SHE10YGL228W SHM1P37292 490 aaPredicted RBP6.04□□□□□ -1.44
SHE10YGL228W ERC1P38767 581 aa6.04□□□□□ -1.44
SHE10YGL228W RPN3P40016 523 aaKnown RBP6.04□□□□□ -1.44
SHE10YGL228W RPS7BP48164 190 aaKnown RBP6.04□□□□□ -1.44
SHE10YGL228W NBP1P52919 319 aaPredicted RBP6.04□□□□□ -1.44
SHE10YGL228W ATG1P53104 897 aa6.04□□□□□ -1.44
SHE10YGL228W HUL5P53119 910 aa6.04□□□□□ -1.44
SHE10YGL228W TOF1P53840 1238 aa6.04□□□□□ -1.44
SHE10YGL228W SVF1Q05515 481 aa6.04□□□□□ -1.44
SHE10YGL228W YAP7Q08182 245 aa6.04□□□□□ -1.44
SHE10YGL228W MSC6Q08818 692 aaKnown RBP6.04□□□□□ -1.44
SHE10YGL228W TCO89Q08921 799 aa6.04□□□□□ -1.44
SHE10YGL228W OM45P16547 393 aa6.03□□□□□ -1.44
SHE10YGL228W SEC65P29478 273 aa6.03□□□□□ -1.44
SHE10YGL228W SEC8P32855 1065 aa6.03□□□□□ -1.44
SHE10YGL228W UBP5P39944 805 aa6.03□□□□□ -1.44
SHE10YGL228W MGA2P40578 1113 aa6.03□□□□□ -1.44
SHE10YGL228W STR2P47164 639 aa6.03□□□□□ -1.44
SHE10YGL228W DUS1P53759 423 aaKnown RBP6.03□□□□□ -1.44
SHE10YGL228W NCS2P53923 493 aaPredicted RBP6.03□□□□□ -1.44
SHE10YGL228W TRM11Q12463 433 aa6.03□□□□□ -1.44
SHE10YGL228W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45 RIP-Chip
SHE10YGL228W PDC1P06169 563 aaKnown RBP6.02□□□□□ -1.45
SHE10YGL228W RPS6AP0CX37 236 aaKnown RBP6.02□□□□□ -1.45
SHE10YGL228W RPS6BP0CX38 236 aaPredicted RBP6.02□□□□□ -1.45
SHE10YGL228W PRE10P21242 288 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
SHE10YGL228W MSH3P25336 1018 aa6.02□□□□□ -1.45
SHE10YGL228W RGT1P32862 1170 aa6.02□□□□□ -1.45
SHE10YGL228W TVP38P36164 337 aa6.02□□□□□ -1.45
SHE10YGL228W FLR1P38124 548 aa6.02□□□□□ -1.45
SHE10YGL228W RTT107P38850 1070 aa6.02□□□□□ -1.45
SHE10YGL228W SPT8P38915 602 aa6.02□□□□□ -1.45
SHE10YGL228W YFL034WP43564 1073 aa6.02□□□□□ -1.45
SHE10YGL228W AVT1P47082 602 aa6.02□□□□□ -1.45
SHE10YGL228W YPR148CQ06523 435 aa6.02□□□□□ -1.45
SHE10YGL228W GPI13Q07830 1017 aa6.02□□□□□ -1.45
SHE10YGL228W YPL277CQ08989 487 aa6.02□□□□□ -1.45
SHE10YGL228W DED1P06634 604 aaKnown RBP6.02□□□□□ -1.45
SHE10YGL228W TCP1P12612 559 aaKnown RBP6.02□□□□□ -1.45
SHE10YGL228W PXL1P36166 706 aa6.02□□□□□ -1.45
SHE10YGL228W MIP6P38760 659 aaKnown RBP6.02□□□□□ -1.45
SHE10YGL228W HMF1P40037 129 aaKnown RBP6.02□□□□□ -1.45
SHE10YGL228W TFG2P41896 400 aaPredicted RBP6.02□□□□□ -1.45
SHE10YGL228W VPS53P47061 822 aa6.02□□□□□ -1.45
SHE10YGL228W VPS75P53853 264 aa6.02□□□□□ -1.45
SHE10YGL228W SEC5P89102 971 aa6.02□□□□□ -1.45
SHE10YGL228W POX1P13711 748 aa6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms