RNA–Protein interactions for RNA: YGL088W

YGL088W, Transcript of Dubious open reading frame, yeast

Gene YGL088W, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGL088W	YGL088W	PRP8	P33334	2413 aa	Known RBP	5.01	□□□□□ -1.61
YGL088W	YGL088W	SNF1	P06782	633 aa	Known RBP	5	□□□□□ -1.61
YGL088W	YGL088W	MAS2	P11914	482 aa		5	□□□□□ -1.61
YGL088W	YGL088W	PRE8	P23639	250 aa		5	□□□□□ -1.61
YGL088W	YGL088W	PDR3	P33200	976 aa		5	□□□□□ -1.61
YGL088W	YGL088W	FPR3	P38911	411 aa	Known RBP	5	□□□□□ -1.61
YGL088W	YGL088W	TVP23	P38962	199 aa		5	□□□□□ -1.61
YGL088W	YGL088W	BUD16	P39988	312 aa		5	□□□□□ -1.61
YGL088W	YGL088W	YJL045W	P47052	634 aa		5	□□□□□ -1.61
YGL088W	YGL088W	YGL039W	P53183	348 aa	Known RBP	5	□□□□□ -1.61
YGL088W	YGL088W	YNR021W	P53723	404 aa	Known RBP	5	□□□□□ -1.61
YGL088W	YGL088W	PNG1	Q02890	363 aa		5	□□□□□ -1.61
YGL088W	YGL088W	GUD1	Q07729	489 aa		5	□□□□□ -1.61
YGL088W	YGL088W	RRD2	Q12461	358 aa		5	□□□□□ -1.61
YGL088W	YGL088W	MRP7	P12687	371 aa		4.99	□□□□□ -1.61
YGL088W	YGL088W	ESS1	P22696	170 aa		4.99	□□□□□ -1.61
YGL088W	YGL088W	YKL097C	P34245	136 aa		4.99	□□□□□ -1.61
YGL088W	YGL088W	PEX28	P38848	579 aa		4.99	□□□□□ -1.61
YGL088W	YGL088W	RPA14	P50106	137 aa		4.99	□□□□□ -1.61
YGL088W	YGL088W	SCS3	P53012	380 aa		4.99	□□□□□ -1.61
YGL088W	YGL088W	ATF2	P53296	535 aa		4.99	□□□□□ -1.61
YGL088W	YGL088W	NSG2	P53898	299 aa		4.99	□□□□□ -1.61
YGL088W	YGL088W	GYL1	Q04322	720 aa		4.99	□□□□□ -1.61
YGL088W	YGL088W	YPR097W	Q06839	1073 aa		4.99	□□□□□ -1.61
YGL088W	YGL088W	MMP1	Q12372	583 aa		4.99	□□□□□ -1.61
YGL088W	YGL088W	NHA1	Q99271	985 aa		4.99	□□□□□ -1.61
YGL088W	YGL088W	PIF1	P07271	859 aa		4.98	□□□□□ -1.61
YGL088W	YGL088W	SAM1	P10659	382 aa	Known RBP	4.98	□□□□□ -1.61
YGL088W	YGL088W	SRM1	P21827	482 aa		4.98	□□□□□ -1.61
YGL088W	YGL088W	TKL1	P23254	680 aa	Known RBP	4.98	□□□□□ -1.61
YGL088W	YGL088W	YJU3	P28321	313 aa		4.98	□□□□□ -1.61
YGL088W	YGL088W	ISW1	P38144	1129 aa		4.98	□□□□□ -1.61
YGL088W	YGL088W	APM2	P38700	605 aa		4.98	□□□□□ -1.61
YGL088W	YGL088W	GYP7	P48365	746 aa		4.98	□□□□□ -1.61
YGL088W	YGL088W	HST3	P53687	447 aa		4.98	□□□□□ -1.61
YGL088W	YGL088W	PDS5	Q04264	1277 aa		4.98	□□□□□ -1.61
YGL088W	YGL088W	THI22	Q06490	572 aa		4.98	□□□□□ -1.61
YGL088W	YGL088W	YDR306C	Q06640	478 aa		4.98	□□□□□ -1.61
YGL088W	YGL088W	YPR084W	Q06821	456 aa		4.98	□□□□□ -1.61
YGL088W	YGL088W	MNL2	Q12205	849 aa		4.98	□□□□□ -1.61
YGL088W	YGL088W	MEX67	Q99257	599 aa	Known RBP	4.98	□□□□□ -1.61
YGL088W	YGL088W	CYB2	P00175	591 aa		4.97	□□□□□ -1.61
YGL088W	YGL088W	APE1	P14904	514 aa		4.97	□□□□□ -1.61
YGL088W	YGL088W	KTR1	P27810	393 aa	Known RBP	4.97	□□□□□ -1.61
YGL088W	YGL088W	YJR115W	P47152	169 aa		4.97	□□□□□ -1.61
YGL088W	YGL088W	TBF1	Q02457	562 aa		4.97	□□□□□ -1.61
YGL088W	YGL088W	SYH1	Q02875	849 aa	Known RBP	4.97	□□□□□ -1.61
YGL088W	YGL088W	YLR257W	Q06146	321 aa	Known RBP	4.97	□□□□□ -1.61
YGL088W	YGL088W	ALR1	Q08269	859 aa		4.97	□□□□□ -1.61
YGL088W	YGL088W	FKS1	P38631	1876 aa	Known RBP	4.96	□□□□□ -1.61
YGL088W	YGL088W	FUS1	P11710	512 aa		4.96	□□□□□ -1.62
YGL088W	YGL088W	COY1	P34237	679 aa		4.96	□□□□□ -1.62
YGL088W	YGL088W	FLR1	P38124	548 aa		4.96	□□□□□ -1.62
YGL088W	YGL088W	REG2	P38232	338 aa		4.96	□□□□□ -1.62
YGL088W	YGL088W	GLO3	P38682	493 aa	Known RBP	4.96	□□□□□ -1.62
YGL088W	YGL088W	CCC2	P38995	1004 aa		4.96	□□□□□ -1.62
YGL088W	YGL088W	TY4A-J	P47023	414 aa		4.96	□□□□□ -1.62
YGL088W	YGL088W	TLG1	Q03322	224 aa		4.96	□□□□□ -1.62
YGL088W	YGL088W	YLR455W	Q06188	304 aa		4.96	□□□□□ -1.62
YGL088W	YGL088W	NSE1	Q07913	336 aa		4.96	□□□□□ -1.62
YGL088W	YGL088W	MYO1	P08964	1928 aa		4.95	□□□□□ -1.62
YGL088W	YGL088W	BEM2	P39960	2167 aa	Known RBP	4.95	□□□□□ -1.62
YGL088W	YGL088W	HIS5	P07172	385 aa		4.95	□□□□□ -1.62
YGL088W	YGL088W	BUD2	P33314	1104 aa		4.95	□□□□□ -1.62
YGL088W	YGL088W	SHP1	P34223	423 aa		4.95	□□□□□ -1.62
YGL088W	YGL088W	MCR1	P36060	302 aa	Known RBP	4.95	□□□□□ -1.62
YGL088W	YGL088W	DBP7	P36120	742 aa	Known RBP	4.95	□□□□□ -1.62
YGL088W	YGL088W	YPT35	P38815	214 aa	Known RBP	4.95	□□□□□ -1.62
YGL088W	YGL088W	HGH1	P48362	394 aa	Known RBP	4.95	□□□□□ -1.62
YGL088W	YGL088W	YDR444W	Q04093	687 aa		4.95	□□□□□ -1.62
YGL088W	YGL088W	YMR321C	Q04898	105 aa		4.95	□□□□□ -1.62
YGL088W	YGL088W	SPH1	Q06160	661 aa		4.95	□□□□□ -1.62
YGL088W	YGL088W	YPL260W	Q08977	551 aa		4.95	□□□□□ -1.62
YGL088W	YGL088W	YLL058W	Q12198	575 aa		4.95	□□□□□ -1.62
YGL088W	YGL088W	MSB2	P32334	1306 aa		4.95	□□□□□ -1.62
YGL088W	YGL088W	TY1B-A	O13527	1196 aa	Known RBP	4.94	□□□□□ -1.62
YGL088W	YGL088W	PCK1	P10963	549 aa		4.94	□□□□□ -1.62
YGL088W	YGL088W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
YGL088W	YGL088W	CDC48	P25694	835 aa	Known RBP	4.94	□□□□□ -1.62
YGL088W	YGL088W	PHO88	P38264	188 aa	Predicted RBP	4.94	□□□□□ -1.62
YGL088W	YGL088W	SLX1	P38324	304 aa		4.94	□□□□□ -1.62
YGL088W	YGL088W	RPT2	P40327	437 aa	Known RBP	4.94	□□□□□ -1.62
YGL088W	YGL088W	POL32	P47110	350 aa		4.94	□□□□□ -1.62
YGL088W	YGL088W	TAM41	P53230	385 aa		4.94	□□□□□ -1.62
YGL088W	YGL088W	DUS3	Q06053	668 aa	Known RBP	4.94	□□□□□ -1.62
YGL088W	YGL088W	PLP2	Q12017	286 aa		4.94	□□□□□ -1.62
YGL088W	YGL088W	HSP82	P02829	709 aa	Known RBP	4.93	□□□□□ -1.62
YGL088W	YGL088W	SGF29	P25554	259 aa		4.93	□□□□□ -1.62
YGL088W	YGL088W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
YGL088W	YGL088W	MRPL7	P36519	292 aa		4.93	□□□□□ -1.62
YGL088W	YGL088W	LCB5	Q06147	687 aa	Known RBP	4.93	□□□□□ -1.62
YGL088W	YGL088W	BRE1	Q07457	700 aa	Known RBP	4.93	□□□□□ -1.62
YGL088W	YGL088W	YDL176W	Q12027	708 aa		4.93	□□□□□ -1.62
YGL088W	YGL088W	CCH1	P50077	2039 aa		4.92	□□□□□ -1.62
YGL088W	YGL088W	TIF1	P10081	395 aa	Known RBP	4.92	□□□□□ -1.62
YGL088W	YGL088W	SEC18	P18759	758 aa	Known RBP	4.92	□□□□□ -1.62
YGL088W	YGL088W	KIP2	P28743	706 aa		4.92	□□□□□ -1.62
YGL088W	YGL088W	YGR266W	P53326	701 aa		4.92	□□□□□ -1.62
YGL088W	YGL088W	RKM4	Q12504	494 aa		4.92	□□□□□ -1.62
YGL088W	YGL088W	DUR1,2	P32528	1835 aa	Known RBP	4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms