RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W YKL151CP36059 337 aa4.8□□□□□ -1.64
LOC1YFR001W YJL049WP47048 450 aa4.8□□□□□ -1.64
LOC1YFR001W NAN1Q02931 896 aaKnown RBP4.8□□□□□ -1.64
LOC1YFR001W SVS1Q12254 260 aa4.8□□□□□ -1.64
LOC1YFR001W RFC5P38251 354 aa4.79□□□□□ -1.64
LOC1YFR001W ETP1P38748 585 aaKnown RBP4.79□□□□□ -1.64
LOC1YFR001W MTC3P53077 123 aa4.79□□□□□ -1.64
LOC1YFR001W ENV11P53246 860 aa4.79□□□□□ -1.64
LOC1YFR001W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
LOC1YFR001W HRQ1Q05549 1077 aa4.79□□□□□ -1.64
LOC1YFR001W CDA2Q06703 312 aa4.79□□□□□ -1.64
LOC1YFR001W YDL177CQ12257 170 aa4.79□□□□□ -1.64
LOC1YFR001W RAD4P14736 754 aa4.78□□□□□ -1.64
LOC1YFR001W ACE2P21192 770 aa4.78□□□□□ -1.64
LOC1YFR001W GAS1P22146 559 aaKnown RBP4.78□□□□□ -1.64
LOC1YFR001W RRT14P40470 206 aa4.78□□□□□ -1.64
LOC1YFR001W GUS1P46655 708 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
LOC1YFR001W FMP25Q08023 583 aa4.78□□□□□ -1.64
LOC1YFR001W OCA5P38738 679 aa4.77□□□□□ -1.65
LOC1YFR001W SAH1P39954 449 aaKnown RBP4.77□□□□□ -1.65
LOC1YFR001W PFD1P46988 109 aa4.77□□□□□ -1.65
LOC1YFR001W PRP43P53131 767 aaKnown RBP4.77□□□□□ -1.65
LOC1YFR001W RSM24Q03976 319 aa4.77□□□□□ -1.65
LOC1YFR001W DUS3Q06053 668 aaKnown RBP4.77□□□□□ -1.65
LOC1YFR001W YLL058WQ12198 575 aa4.77□□□□□ -1.65
LOC1YFR001W RPL8BP29453 256 aaKnown RBP4.76□□□□□ -1.65
LOC1YFR001W HFM1P51979 1187 aa4.76□□□□□ -1.65
LOC1YFR001W SRP1Q02821 542 aaKnown RBP4.76□□□□□ -1.65
LOC1YFR001W YDR306CQ06640 478 aa4.76□□□□□ -1.65
LOC1YFR001W SPO75Q07798 868 aa4.76□□□□□ -1.65
LOC1YFR001W MDM38Q08179 573 aa4.76□□□□□ -1.65
LOC1YFR001W KIN2P13186 1147 aaKnown RBP4.75□□□□□ -1.65
LOC1YFR001W PRP9P19736 530 aaKnown RBP4.75□□□□□ -1.65
LOC1YFR001W APL1P27351 700 aa4.75□□□□□ -1.65
LOC1YFR001W CDC12P32468 407 aaKnown RBP4.75□□□□□ -1.65
LOC1YFR001W TIM54P47045 478 aa4.75□□□□□ -1.65
LOC1YFR001W UTP8P53276 713 aaKnown RBP4.75□□□□□ -1.65
LOC1YFR001W MRPL22P53881 309 aa4.75□□□□□ -1.65
LOC1YFR001W NSE3Q05541 303 aa4.75□□□□□ -1.65
LOC1YFR001W RIB2Q12362 591 aaKnown RBP4.75□□□□□ -1.65
LOC1YFR001W YOL098CQ12496 1037 aa4.75□□□□□ -1.65
LOC1YFR001W CYC1P00044 109 aaPredicted RBP4.74□□□□□ -1.65
LOC1YFR001W HBS1P32769 611 aaKnown RBP4.74□□□□□ -1.65
LOC1YFR001W ALR2P43553 858 aa4.74□□□□□ -1.65
LOC1YFR001W IOC3P43596 787 aa4.74□□□□□ -1.65
LOC1YFR001W HUL5P53119 910 aa4.74□□□□□ -1.65
LOC1YFR001W SNO2P53823 222 aa4.74□□□□□ -1.65
LOC1YFR001W EAF1Q06337 982 aa4.74□□□□□ -1.65
LOC1YFR001W OSH2Q12451 1283 aa4.74□□□□□ -1.65
LOC1YFR001W CMP2P14747 604 aa4.73□□□□□ -1.65
LOC1YFR001W SRM1P21827 482 aa4.73□□□□□ -1.65
LOC1YFR001W AAR2P32357 355 aaPredicted RBP4.73□□□□□ -1.65
LOC1YFR001W THI80P35202 319 aa4.73□□□□□ -1.65
LOC1YFR001W GIC1P38785 314 aa4.73□□□□□ -1.65
LOC1YFR001W NPP2P39997 493 aa4.73□□□□□ -1.65
LOC1YFR001W ERP6P53198 216 aa4.73□□□□□ -1.65
LOC1YFR001W SRT1Q03175 343 aa4.73□□□□□ -1.65
LOC1YFR001W MSC2Q03455 724 aa4.73□□□□□ -1.65
LOC1YFR001W SIZ1Q04195 904 aa4.73□□□□□ -1.65
LOC1YFR001W UBX5Q06682 500 aa4.73□□□□□ -1.65
LOC1YFR001W BDF2Q07442 638 aa4.73□□□□□ -1.65
LOC1YFR001W XYL2Q07993 356 aa4.73□□□□□ -1.65
LOC1YFR001W OSW2Q12202 724 aa4.73□□□□□ -1.65
LOC1YFR001W GAL10P04397 699 aa4.72□□□□□ -1.65
LOC1YFR001W STI1P15705 589 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
LOC1YFR001W HSP60P19882 572 aaKnown RBP4.72□□□□□ -1.65
LOC1YFR001W FUN30P31380 1131 aa4.72□□□□□ -1.65
LOC1YFR001W PPH3P32345 308 aa4.72□□□□□ -1.65
LOC1YFR001W YHR020WP38708 688 aaKnown RBP4.72□□□□□ -1.65
LOC1YFR001W YGR125WP53273 1036 aa4.72□□□□□ -1.65
LOC1YFR001W PLB2Q03674 706 aa4.72□□□□□ -1.65
LOC1YFR001W SGD1Q06132 899 aa4.72□□□□□ -1.65
LOC1YFR001W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
LOC1YFR001W FLC1Q08967 793 aa4.72□□□□□ -1.65
LOC1YFR001W CDC53Q12018 815 aaKnown RBP4.72□□□□□ -1.65
LOC1YFR001W CIT1P00890 479 aa4.71□□□□□ -1.66
LOC1YFR001W ADE8P04161 214 aa4.71□□□□□ -1.66
LOC1YFR001W YCR015CP25616 317 aa4.71□□□□□ -1.66
LOC1YFR001W ARE1P25628 610 aa4.71□□□□□ -1.66
LOC1YFR001W SRP40P32583 406 aaPredicted RBP4.71□□□□□ -1.66
LOC1YFR001W AFR1P33304 620 aa4.71□□□□□ -1.66
LOC1YFR001W YRO2P38079 344 aa4.71□□□□□ -1.66
LOC1YFR001W LAM1P38851 1228 aa4.71□□□□□ -1.66
LOC1YFR001W YAP1801P38856 637 aa4.71□□□□□ -1.66
LOC1YFR001W SIT1P39980 628 aa4.71□□□□□ -1.66
LOC1YFR001W GYP7P48365 746 aa4.71□□□□□ -1.66
LOC1YFR001W TPO2P53283 614 aa4.71□□□□□ -1.66
LOC1YFR001W ESC8Q08119 714 aa4.71□□□□□ -1.66
LOC1YFR001W PRP6P19735 899 aaPredicted RBP4.7□□□□□ -1.66
LOC1YFR001W NPP1P25353 742 aa4.7□□□□□ -1.66
LOC1YFR001W CCC2P38995 1004 aa4.7□□□□□ -1.66
LOC1YFR001W RSP5P39940 809 aaKnown RBP4.7□□□□□ -1.66
LOC1YFR001W ROT1Q03691 256 aa4.7□□□□□ -1.66
LOC1YFR001W YOR352WQ08816 343 aa4.7□□□□□ -1.66
LOC1YFR001W HBN1Q96VH4 193 aa4.7□□□□□ -1.66
LOC1YFR001W CDC11P32458 415 aa4.69□□□□□ -1.66
LOC1YFR001W YKR078WP36158 585 aaKnown RBP4.69□□□□□ -1.66
LOC1YFR001W YBR284WP38150 797 aa4.69□□□□□ -1.66
LOC1YFR001W ECM21P38167 1117 aaKnown RBP4.69□□□□□ -1.66
LOC1YFR001W AIM3P38266 947 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms