RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C ANP1P32629 500 aa7.47□□□□□ -1.21
SHO1YER118C SCT1P32784 759 aa7.47□□□□□ -1.21
SHO1YER118C PES4P39684 611 aa7.47□□□□□ -1.21
SHO1YER118C VPS8P39702 1274 aa7.47□□□□□ -1.21
SHO1YER118C YGL176CP46945 554 aa7.47□□□□□ -1.21
SHO1YER118C HOL1P53389 586 aa7.47□□□□□ -1.21
SHO1YER118C MEP3P53390 489 aa7.47□□□□□ -1.21
SHO1YER118C YNR063WP53749 607 aa7.47□□□□□ -1.21
SHO1YER118C GTR1Q00582 310 aa7.47□□□□□ -1.21
SHO1YER118C YMR018WQ04364 514 aa7.47□□□□□ -1.21
SHO1YER118C EMG1Q06287 252 aaKnown RBP7.47□□□□□ -1.21
SHO1YER118C YOR296WQ08748 1289 aa7.47□□□□□ -1.21
SHO1YER118C PUS1Q12211 544 aaKnown RBP7.47□□□□□ -1.21
SHO1YER118C RMP1Q12530 201 aa7.47□□□□□ -1.21
SHO1YER118C CYB2P00175 591 aa7.46□□□□□ -1.22
SHO1YER118C MSD1P15179 658 aaKnown RBP7.46□□□□□ -1.22
SHO1YER118C MSH3P25336 1018 aa7.46□□□□□ -1.22
SHO1YER118C HEM12P32347 362 aaPredicted RBP7.46□□□□□ -1.22
SHO1YER118C BEM3P32873 1128 aa7.46□□□□□ -1.22
SHO1YER118C RDH54P38086 958 aa7.46□□□□□ -1.22
SHO1YER118C GZF3P42944 551 aaKnown RBP7.46□□□□□ -1.22
SHO1YER118C ALG2P43636 503 aa7.46□□□□□ -1.22
SHO1YER118C SGM1P47166 707 aa7.46□□□□□ -1.22
SHO1YER118C CAF120P53836 1060 aa7.46□□□□□ -1.22
SHO1YER118C SPN1Q06505 410 aaPredicted RBP7.46□□□□□ -1.22
SHO1YER118C MSM1P22438 575 aa7.45□□□□□ -1.22
SHO1YER118C DAL3P32459 195 aa7.45□□□□□ -1.22
SHO1YER118C KAP122P32767 1081 aa7.45□□□□□ -1.22
SHO1YER118C SMY2P32909 740 aaKnown RBP7.45□□□□□ -1.22
SHO1YER118C PET10P36139 283 aa7.45□□□□□ -1.22
SHO1YER118C BIT2P38346 545 aa7.45□□□□□ -1.22
SHO1YER118C ERR3P42222 437 aa7.45□□□□□ -1.22
SHO1YER118C HAP5Q02516 242 aa7.45□□□□□ -1.22
SHO1YER118C GUD1Q07729 489 aa7.45□□□□□ -1.22
SHO1YER118C PSR1Q07800 427 aa7.45□□□□□ -1.22
SHO1YER118C PHR1P05066 565 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
SHO1YER118C PFK1P16861 987 aaKnown RBP7.44□□□□□ -1.22
SHO1YER118C RPC31P17890 251 aa7.44□□□□□ -1.22
SHO1YER118C NAB2P32505 525 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
SHO1YER118C VPH1P32563 840 aaKnown RBP7.44□□□□□ -1.22
SHO1YER118C VMA8P32610 256 aaKnown RBP7.44□□□□□ -1.22
SHO1YER118C ECM32P32644 1121 aaKnown RBP7.44□□□□□ -1.22
SHO1YER118C RIM11P38615 370 aa7.44□□□□□ -1.22
SHO1YER118C QRI7P43122 407 aa7.44□□□□□ -1.22
SHO1YER118C HOS2P53096 452 aaPredicted RBP7.44□□□□□ -1.22
SHO1YER118C YGR016WP53209 190 aa7.44□□□□□ -1.22
SHO1YER118C ERO1Q03103 563 aa7.44□□□□□ -1.22
SHO1YER118C YER152CP10356 443 aa7.43□□□□□ -1.22
SHO1YER118C BRF1P29056 596 aa7.43□□□□□ -1.22
SHO1YER118C SPC29P33419 253 aa7.43□□□□□ -1.22
SHO1YER118C NOP4P37838 685 aaKnown RBP7.43□□□□□ -1.22
SHO1YER118C MNN11P46985 422 aaKnown RBP7.43□□□□□ -1.22
SHO1YER118C COG8Q04632 607 aa7.43□□□□□ -1.22
SHO1YER118C DFG5Q05031 458 aa7.43□□□□□ -1.22
SHO1YER118C SPO21Q12411 609 aa7.43□□□□□ -1.22
SHO1YER118C SYP1P25623 870 aaKnown RBP7.42□□□□□ -1.22
SHO1YER118C CDC60P26637 1090 aaKnown RBP7.42□□□□□ -1.22
SHO1YER118C STO1P34160 861 aaKnown RBP7.42□□□□□ -1.22
SHO1YER118C SAS3P34218 831 aa7.42□□□□□ -1.22
SHO1YER118C ABZ1P37254 787 aaPredicted RBP7.42□□□□□ -1.22
SHO1YER118C PCM1P38628 557 aaKnown RBP7.42□□□□□ -1.22
SHO1YER118C BCD1P38772 366 aa7.42□□□□□ -1.22
SHO1YER118C CAJ1P39101 391 aa7.42□□□□□ -1.22
SHO1YER118C EMP65P40085 556 aa7.42□□□□□ -1.22
SHO1YER118C GPI8P49018 411 aa7.42□□□□□ -1.22
SHO1YER118C YDL129WQ07555 291 aa7.42□□□□□ -1.22
SHO1YER118C YPR071WQ12346 211 aa7.42□□□□□ -1.22
SHO1YER118C TY1B-AO13527 1196 aaKnown RBP7.41□□□□□ -1.22
SHO1YER118C DBP5P20449 482 aaKnown RBP7.41□□□□□ -1.22
SHO1YER118C RER1P25560 188 aa7.41□□□□□ -1.22
SHO1YER118C KRR1P25586 316 aaPredicted RBP7.41□□□□□ -1.22
SHO1YER118C PXA2P34230 853 aa7.41□□□□□ -1.22
SHO1YER118C SHU2P38957 223 aa7.41□□□□□ -1.22
SHO1YER118C DLD3P39976 496 aaKnown RBP7.41□□□□□ -1.22
SHO1YER118C GUS1P46655 708 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
SHO1YER118C YJL171CP46992 396 aa7.41□□□□□ -1.22
SHO1YER118C CTF4Q01454 927 aa7.41□□□□□ -1.22
SHO1YER118C RAT1Q02792 1006 aaKnown RBP7.41□□□□□ -1.22
SHO1YER118C SRP1Q02821 542 aaKnown RBP7.41□□□□□ -1.22
SHO1YER118C AOS1Q06624 347 aa7.41□□□□□ -1.22
SHO1YER118C YDR306CQ06640 478 aa7.41□□□□□ -1.22
SHO1YER118C HVG1P0CE11 249 aa7.4□□□□□ -1.22
SHO1YER118C MRP7P12687 371 aa7.4□□□□□ -1.22
SHO1YER118C TPM1P17536 199 aaKnown RBP7.4□□□□□ -1.22
SHO1YER118C PSY4P38193 441 aa7.4□□□□□ -1.22
SHO1YER118C MEP1P40260 492 aa7.4□□□□□ -1.22
SHO1YER118C PRP3Q03338 469 aaPredicted RBP7.4□□□□□ -1.22
SHO1YER118C SPO71Q03868 1245 aa7.4□□□□□ -1.22
SHO1YER118C CIA1Q05583 330 aa7.4□□□□□ -1.22
SHO1YER118C BMT6Q12291 365 aa7.4□□□□□ -1.22
SHO1YER118C SCM3Q12334 223 aa7.4□□□□□ -1.22
SHO1YER118C SPT7P35177 1332 aa7.4□□□□□ -1.22
SHO1YER118C SSM4P40318 1319 aa7.39□□□□□ -1.23
SHO1YER118C DED1P06634 604 aaKnown RBP7.39□□□□□ -1.23
SHO1YER118C COX11P19516 300 aaKnown RBP7.39□□□□□ -1.23
SHO1YER118C AAR2P32357 355 aaPredicted RBP7.39□□□□□ -1.23
SHO1YER118C DID4P36108 232 aa7.39□□□□□ -1.23
SHO1YER118C MCM7P38132 845 aa7.39□□□□□ -1.23
SHO1YER118C SIT1P39980 628 aa7.39□□□□□ -1.23
SHO1YER118C SIP5P40210 489 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms