RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene SPC25, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC25	YER018C	FUS2	Q05670	677 aa		12.02	□□□□□ -0.49
SPC25	YER018C	TFC8	Q12308	588 aa		12.02	□□□□□ -0.49
SPC25	YER018C	CDC48	P25694	835 aa	Known RBP	12.01	□□□□□ -0.49
SPC25	YER018C	MRPL10	P36520	322 aa		12.01	□□□□□ -0.49
SPC25	YER018C	PPS1	P38148	807 aa		12.01	□□□□□ -0.49
SPC25	YER018C	RPN3	P40016	523 aa	Known RBP	12.01	□□□□□ -0.49
SPC25	YER018C	YPR148C	Q06523	435 aa		12.01	□□□□□ -0.49
SPC25	YER018C	SRF1	Q12516	437 aa		12.01	□□□□□ -0.49
SPC25	YER018C	PFK1	P16861	987 aa	Known RBP	12	□□□□□ -0.49
SPC25	YER018C	RGT1	P32862	1170 aa		12	□□□□□ -0.49
SPC25	YER018C	MIC60	P36112	540 aa		12	□□□□□ -0.49
SPC25	YER018C	DBP7	P36120	742 aa	Known RBP	12	□□□□□ -0.49
SPC25	YER018C	HMF1	P40037	129 aa	Known RBP	12	□□□□□ -0.49
SPC25	YER018C	NUP82	P40368	713 aa		12	□□□□□ -0.49
SPC25	YER018C	VPS53	P47061	822 aa		12	□□□□□ -0.49
SPC25	YER018C	HCR1	Q05775	265 aa	Known RBP	12	□□□□□ -0.49
SPC25	YER018C	MET7	Q08645	548 aa		12	□□□□□ -0.49
SPC25	YER018C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	11.99	□□□□□ -0.49	not detected
SPC25	YER018C	YUR1	P26725	428 aa		11.99	□□□□□ -0.49
SPC25	YER018C	ADE17	P38009	592 aa	Known RBP	11.99	□□□□□ -0.49
SPC25	YER018C	MXR1	P40029	184 aa		11.99	□□□□□ -0.49
SPC25	YER018C	RRD1	P40454	393 aa	Known RBP	11.99	□□□□□ -0.49
SPC25	YER018C	FIS1	P40515	155 aa		11.99	□□□□□ -0.49
SPC25	YER018C	LSC2	P53312	427 aa		11.99	□□□□□ -0.49
SPC25	YER018C	GFD1	Q04839	188 aa	Known RBP	11.99	□□□□□ -0.49
SPC25	YER018C	YMR321C	Q04898	105 aa		11.99	□□□□□ -0.49
SPC25	YER018C	SPP382	Q06411	708 aa	Predicted RBP	11.99	□□□□□ -0.49
SPC25	YER018C	TRM11	Q12463	433 aa		11.99	□□□□□ -0.49
SPC25	YER018C	ECM29	P38737	1868 aa		11.98	□□□□□ -0.49
SPC25	YER018C	PSO2	P30620	661 aa		11.98	□□□□□ -0.49
SPC25	YER018C	YKL091C	P33324	310 aa	Known RBP	11.98	□□□□□ -0.49
SPC25	YER018C	TVP38	P36164	337 aa		11.98	□□□□□ -0.49
SPC25	YER018C	YGR237C	P50089	785 aa		11.98	□□□□□ -0.49
SPC25	YER018C	YPL216W	Q08964	1102 aa		11.98	□□□□□ -0.49
SPC25	YER018C	YLL058W	Q12198	575 aa		11.98	□□□□□ -0.49
SPC25	YER018C	CDC37	P06101	506 aa	Known RBP	11.97	□□□□□ -0.49
SPC25	YER018C	PRP22	P24384	1145 aa	Known RBP	11.97	□□□□□ -0.49
SPC25	YER018C	NCS6	P53088	359 aa		11.97	□□□□□ -0.49
SPC25	YER018C	WAR1	Q03631	944 aa		11.97	□□□□□ -0.49
SPC25	YER018C	ATG19	P35193	415 aa		11.96	□□□□□ -0.49
SPC25	YER018C	PSY4	P38193	441 aa		11.96	□□□□□ -0.49
SPC25	YER018C	BCD1	P38772	366 aa		11.96	□□□□□ -0.49
SPC25	YER018C	YFL034W	P43564	1073 aa		11.96	□□□□□ -0.49
SPC25	YER018C	RPS7B	P48164	190 aa	Known RBP	11.96	□□□□□ -0.49
SPC25	YER018C	NCS2	P53923	493 aa	Predicted RBP	11.96	□□□□□ -0.49
SPC25	YER018C	GPI13	Q07830	1017 aa		11.96	□□□□□ -0.49
SPC25	YER018C	NCR1	Q12200	1170 aa		11.96	□□□□□ -0.49
SPC25	YER018C	OM45	P16547	393 aa		11.95	□□□□□ -0.5
SPC25	YER018C	YEL025C	P39991	1188 aa		11.95	□□□□□ -0.5
SPC25	YER018C	MGA2	P40578	1113 aa		11.95	□□□□□ -0.5
SPC25	YER018C	TFG2	P41896	400 aa	Predicted RBP	11.95	□□□□□ -0.5
SPC25	YER018C	SCS3	P53012	380 aa		11.95	□□□□□ -0.5
SPC25	YER018C	TOF1	P53840	1238 aa		11.95	□□□□□ -0.5
SPC25	YER018C	SEC5	P89102	971 aa		11.95	□□□□□ -0.5
SPC25	YER018C	YOL075C	Q08234	1294 aa		11.95	□□□□□ -0.5
SPC25	YER018C	TCP1	P12612	559 aa	Known RBP	11.94	□□□□□ -0.5
SPC25	YER018C	PSF2	P40359	213 aa		11.94	□□□□□ -0.5
SPC25	YER018C	EBS1	Q03466	884 aa	Known RBP	11.94	□□□□□ -0.5
SPC25	YER018C	YDL057W	Q07379	328 aa		11.94	□□□□□ -0.5
SPC25	YER018C	TMA16	Q08687	178 aa		11.94	□□□□□ -0.5
SPC25	YER018C	DBP5	P20449	482 aa	Known RBP	11.93	□□□□□ -0.5
SPC25	YER018C	MRC1	P25588	1096 aa		11.93	□□□□□ -0.5
SPC25	YER018C	PGM2	P37012	569 aa	Known RBP	11.93	□□□□□ -0.5
SPC25	YER018C	NOC3	Q07896	663 aa	Predicted RBP	11.93	□□□□□ -0.5
SPC25	YER018C	SMC5	Q08204	1093 aa		11.93	□□□□□ -0.5
SPC25	YER018C	POX1	P13711	748 aa		11.92	□□□□□ -0.5
SPC25	YER018C	DAL7	P21826	554 aa		11.92	□□□□□ -0.5
SPC25	YER018C	YET1	P35723	206 aa		11.92	□□□□□ -0.5
SPC25	YER018C	SPT8	P38915	602 aa		11.92	□□□□□ -0.5
SPC25	YER018C	BIM1	P40013	344 aa		11.92	□□□□□ -0.5
SPC25	YER018C	TOS3	P43637	560 aa		11.92	□□□□□ -0.5
SPC25	YER018C	PSP2	P50109	593 aa	Known RBP	11.92	□□□□□ -0.5
SPC25	YER018C	MDR1	P53258	950 aa		11.92	□□□□□ -0.5
SPC25	YER018C	BRE5	P53741	515 aa	Known RBP	11.92	□□□□□ -0.5
SPC25	YER018C	YPL277C	Q08989	487 aa		11.92	□□□□□ -0.5
SPC25	YER018C	ICL2	Q12031	575 aa		11.92	□□□□□ -0.5
SPC25	YER018C	PDC1	P06169	563 aa	Known RBP	11.91	□□□□□ -0.5
SPC25	YER018C	DED1	P06634	604 aa	Known RBP	11.91	□□□□□ -0.5
SPC25	YER018C	MAS2	P11914	482 aa		11.91	□□□□□ -0.5
SPC25	YER018C	MSH3	P25336	1018 aa		11.91	□□□□□ -0.5
SPC25	YER018C	MRF1	P30775	413 aa	Predicted RBP	11.91	□□□□□ -0.5
SPC25	YER018C	UBP13	P38187	747 aa		11.91	□□□□□ -0.5
SPC25	YER018C	HUL4	P40985	892 aa		11.91	□□□□□ -0.5
SPC25	YER018C	AIP1	P46680	615 aa	Known RBP	11.91	□□□□□ -0.5
SPC25	YER018C	NBP1	P52919	319 aa	Predicted RBP	11.91	□□□□□ -0.5
SPC25	YER018C	ARK1	P53974	638 aa		11.91	□□□□□ -0.5
SPC25	YER018C	PCK1	P10963	549 aa		11.9	□□□□□ -0.5
SPC25	YER018C	DBP1	P24784	617 aa	Known RBP	11.9	□□□□□ -0.5
SPC25	YER018C	MCM2	P29469	868 aa		11.9	□□□□□ -0.5
SPC25	YER018C	IRE1	P32361	1115 aa		11.9	□□□□□ -0.5
SPC25	YER018C	TIM23	P32897	222 aa		11.9	□□□□□ -0.5
SPC25	YER018C	SAP190	P36123	1033 aa		11.9	□□□□□ -0.5
SPC25	YER018C	FLR1	P38124	548 aa		11.9	□□□□□ -0.5
SPC25	YER018C	ERC1	P38767	581 aa		11.9	□□□□□ -0.5
SPC25	YER018C	YJR107W	P47145	328 aa		11.9	□□□□□ -0.5
SPC25	YER018C	CCM1	P48237	864 aa	Predicted RBP	11.9	□□□□□ -0.5
SPC25	YER018C	RPC53	P25441	422 aa		11.89	□□□□□ -0.51
SPC25	YER018C	GPT2	P36148	743 aa		11.89	□□□□□ -0.51
SPC25	YER018C	EAF5	P39995	279 aa		11.89	□□□□□ -0.51
SPC25	YER018C	YAP7	Q08182	245 aa		11.89	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms