RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C BIO5P53744 561 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C MEC3Q02574 474 aa1.69□□□□□ -2.14
SEC3YER008C VPS30Q02948 557 aa1.69□□□□□ -2.14
SEC3YER008C DUS3Q06053 668 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C AOS1Q06624 347 aa1.69□□□□□ -2.14
SEC3YER008C RPS4AP0CX35 261 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C RPS4BP0CX36 261 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C ALG3P38179 458 aa1.69□□□□□ -2.14
SEC3YER008C RAT1Q02792 1006 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
SEC3YER008C FPR4Q06205 392 aaPredicted RBP1.69□□□□□ -2.14
SEC3YER008C PHM7Q12252 991 aa1.69□□□□□ -2.14
SEC3YER008C RPS9AO13516 197 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C HXK1P04806 485 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C SSB1P11484 613 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C PRO1P32264 428 aa1.69□□□□□ -2.14
SEC3YER008C MNR2P35724 969 aa1.69□□□□□ -2.14
SEC3YER008C FUI1P38196 639 aa1.69□□□□□ -2.14
SEC3YER008C SSB2P40150 613 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C YGR130CP53278 816 aa1.69□□□□□ -2.14
SEC3YER008C RCM1P53972 490 aa1.69□□□□□ -2.14
SEC3YER008C ALO1P54783 526 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C SVL3Q03088 825 aaKnown RBP1.69□□□□□ -2.14
SEC3YER008C PIN2Q12057 282 aa1.69□□□□□ -2.14
SEC3YER008C ADR1P07248 1323 aa1.68□□□□□ -2.14
SEC3YER008C CHS2P14180 963 aa1.68□□□□□ -2.14
SEC3YER008C GAL11P19659 1081 aa1.68□□□□□ -2.14
SEC3YER008C RFA1P22336 621 aaKnown RBP1.68□□□□□ -2.14
SEC3YER008C DUR3P33413 735 aa1.68□□□□□ -2.14
SEC3YER008C MSC7P38694 644 aa1.68□□□□□ -2.14
SEC3YER008C YHR020WP38708 688 aaKnown RBP1.68□□□□□ -2.14
SEC3YER008C NEM1P38757 446 aa1.68□□□□□ -2.14
SEC3YER008C SLN1P39928 1220 aaPredicted RBP1.68□□□□□ -2.14
SEC3YER008C MMM1P41800 426 aa1.68□□□□□ -2.14
SEC3YER008C PPM2Q08282 695 aa1.68□□□□□ -2.14
SEC3YER008C APL1P27351 700 aa1.68□□□□□ -2.14
SEC3YER008C HNT2P49775 206 aa1.68□□□□□ -2.14
SEC3YER008C YGL140CP53120 1219 aa1.68□□□□□ -2.14
SEC3YER008C TYW3P53177 273 aa1.68□□□□□ -2.14
SEC3YER008C RPN4Q03465 531 aa1.68□□□□□ -2.14
SEC3YER008C UTP5Q04177 643 aaKnown RBP1.68□□□□□ -2.14
SEC3YER008C EAF1Q06337 982 aa1.68□□□□□ -2.14
SEC3YER008C OPI10Q08202 246 aa1.68□□□□□ -2.14
SEC3YER008C MCA1Q08601 432 aa1.68□□□□□ -2.14
SEC3YER008C SEC7P11075 2009 aaKnown RBP1.68□□□□□ -2.14
SEC3YER008C TY1A-LR4P0C2I8 440 aaKnown RBP1.68□□□□□ -2.14
SEC3YER008C TY1A-DR6P0CX70 440 aa1.68□□□□□ -2.14
SEC3YER008C TY1A-ER1P0CX71 440 aa1.68□□□□□ -2.14
SEC3YER008C TY1A-LR2P0CX72 440 aa1.68□□□□□ -2.14
SEC3YER008C TY1A-PLP0CX73 440 aa1.68□□□□□ -2.14
SEC3YER008C TY1A-JR1P0CX74 440 aa1.68□□□□□ -2.14
SEC3YER008C TY1A-LR3P0CX75 440 aa1.68□□□□□ -2.14
SEC3YER008C TY1A-ML2P0CX76 440 aa1.68□□□□□ -2.14
SEC3YER008C CDC11P32458 415 aa1.68□□□□□ -2.14
SEC3YER008C SEC6P32844 805 aa1.68□□□□□ -2.14
SEC3YER008C YBR284WP38150 797 aa1.68□□□□□ -2.14
SEC3YER008C PTC7P38797 343 aa1.68□□□□□ -2.14
SEC3YER008C PUS2P53167 370 aa1.68□□□□□ -2.14
SEC3YER008C TY1A-GR1Q12085 440 aa1.68□□□□□ -2.14
SEC3YER008C TY1A-PR3Q6Q5H1 440 aaKnown RBP1.68□□□□□ -2.14
SEC3YER008C TY1A-OLQ92392 440 aaKnown RBP1.68□□□□□ -2.14
SEC3YER008C THI4P32318 326 aa1.67□□□□□ -2.14
SEC3YER008C SFP1P32432 683 aa1.67□□□□□ -2.14
SEC3YER008C MPE1P35728 441 aaKnown RBP1.67□□□□□ -2.14
SEC3YER008C KAE1P36132 386 aa1.67□□□□□ -2.14
SEC3YER008C CCZ1P38273 704 aa1.67□□□□□ -2.14
SEC3YER008C YHL012WP38709 493 aa1.67□□□□□ -2.14
SEC3YER008C DSS1P39112 969 aa1.67□□□□□ -2.14
SEC3YER008C MBP1P39678 833 aa1.67□□□□□ -2.14
SEC3YER008C TPM2P40414 161 aa1.67□□□□□ -2.14
SEC3YER008C VPS53P47061 822 aa1.67□□□□□ -2.14
SEC3YER008C TNA1P53322 534 aa1.67□□□□□ -2.14
SEC3YER008C TY4B-PA0A0B7P3V8 1104 aa1.67□□□□□ -2.14
SEC3YER008C NNK1P36003 928 aa1.67□□□□□ -2.14
SEC3YER008C UBP12P39538 1254 aa1.67□□□□□ -2.14
SEC3YER008C PIC2P40035 300 aa1.67□□□□□ -2.14
SEC3YER008C GCV1P48015 400 aa1.67□□□□□ -2.14
SEC3YER008C REC8Q12188 680 aa1.67□□□□□ -2.14
SEC3YER008C SLP1Q12232 587 aa1.67□□□□□ -2.14
SEC3YER008C TY4A-HQ6Q5P6 413 aa1.67□□□□□ -2.14
SEC3YER008C NUP159P40477 1460 aa1.67□□□□□ -2.14
SEC3YER008C CYC7P00045 113 aa1.67□□□□□ -2.14
SEC3YER008C COBP00163 385 aa1.67□□□□□ -2.14
SEC3YER008C CDC34P14682 295 aa1.67□□□□□ -2.14
SEC3YER008C APA1P16550 321 aaKnown RBP1.67□□□□□ -2.14
SEC3YER008C SRM1P21827 482 aa1.67□□□□□ -2.14
SEC3YER008C DUT1P33317 147 aa1.67□□□□□ -2.14
SEC3YER008C OMA1P36163 345 aa1.67□□□□□ -2.14
SEC3YER008C GRX7P38068 203 aa1.67□□□□□ -2.14
SEC3YER008C TOS1P38288 455 aa1.67□□□□□ -2.14
SEC3YER008C CNN1P43618 361 aa1.67□□□□□ -2.14
SEC3YER008C YJL045WP47052 634 aa1.67□□□□□ -2.14
SEC3YER008C SRP1Q02821 542 aaKnown RBP1.67□□□□□ -2.14
SEC3YER008C GIN4Q12263 1142 aa1.67□□□□□ -2.14
SEC3YER008C YGR161W-CQ3E744 92 aa1.67□□□□□ -2.14
SEC3YER008C BUD3P25558 1636 aa1.67□□□□□ -2.14
SEC3YER008C TRP2P00899 507 aaKnown RBP1.66□□□□□ -2.14
SEC3YER008C HSP60P19882 572 aaKnown RBP1.66□□□□□ -2.14
SEC3YER008C TRX2P22803 104 aaKnown RBP1.66□□□□□ -2.14
SEC3YER008C KIP1P28742 1111 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms