RNA–Protein interactions for RNA: YDR405W

MRP20, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRP20, Length 792 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRP20	YDR405W	AZR1	P50080	613 aa		11.13	□□□□□ -0.63
MRP20	YDR405W	LSP1	Q12230	341 aa	Known RBP	11.13	□□□□□ -0.63
MRP20	YDR405W	FOB1	O13329	566 aa		11.12	□□□□□ -0.63
MRP20	YDR405W	TUF1	P02992	437 aa	Known RBP	11.12	□□□□□ -0.63
MRP20	YDR405W	SUP45	P12385	437 aa	Known RBP	11.12	□□□□□ -0.63
MRP20	YDR405W	FRS2	P15625	503 aa	Known RBP	11.12	□□□□□ -0.63
MRP20	YDR405W	MIP1	P15801	1254 aa		11.12	□□□□□ -0.63
MRP20	YDR405W	RDS1	P25611	832 aa		11.12	□□□□□ -0.63
MRP20	YDR405W	CDC48	P25694	835 aa	Known RBP	11.12	□□□□□ -0.63
MRP20	YDR405W	MSC7	P38694	644 aa		11.12	□□□□□ -0.63
MRP20	YDR405W	DIP5	P53388	608 aa		11.12	□□□□□ -0.63
MRP20	YDR405W	CBK1	P53894	756 aa		11.12	□□□□□ -0.63
MRP20	YDR405W	CUS1	Q02554	436 aa	Predicted RBP	11.12	□□□□□ -0.63
MRP20	YDR405W	VPS72	Q03388	795 aa		11.12	□□□□□ -0.63
MRP20	YDR405W	HRQ1	Q05549	1077 aa		11.12	□□□□□ -0.63
MRP20	YDR405W	MMR1	Q06324	491 aa		11.12	□□□□□ -0.63
MRP20	YDR405W	TCP1	P12612	559 aa	Known RBP	11.11	□□□□□ -0.63
MRP20	YDR405W	RGP1	P16664	663 aa		11.11	□□□□□ -0.63
MRP20	YDR405W	ROX1	P25042	368 aa		11.11	□□□□□ -0.63
MRP20	YDR405W	SMY2	P32909	740 aa	Known RBP	11.11	□□□□□ -0.63
MRP20	YDR405W	THI6	P41835	540 aa		11.11	□□□□□ -0.63
MRP20	YDR405W	BRE2	P43132	505 aa		11.11	□□□□□ -0.63
MRP20	YDR405W	PGA2	P53903	129 aa		11.11	□□□□□ -0.63
MRP20	YDR405W	URA1	P28272	314 aa	Predicted RBP	11.1	□□□□□ -0.63
MRP20	YDR405W	EFT1	P32324	842 aa	Known RBP	11.1	□□□□□ -0.63
MRP20	YDR405W	MSS51	P32335	436 aa		11.1	□□□□□ -0.63
MRP20	YDR405W	IRE1	P32361	1115 aa		11.1	□□□□□ -0.63
MRP20	YDR405W	RFT1	P38206	574 aa	Predicted RBP	11.1	□□□□□ -0.63
MRP20	YDR405W	NUP82	P40368	713 aa		11.1	□□□□□ -0.63
MRP20	YDR405W	CUE3	P53137	624 aa	Known RBP	11.1	□□□□□ -0.63
MRP20	YDR405W	HIF1	Q12373	385 aa		11.1	□□□□□ -0.63
MRP20	YDR405W	TAO3	P40468	2376 aa		11.09	□□□□□ -0.63
MRP20	YDR405W	POT1	P27796	417 aa	Known RBP RIP-Chip data	11.09	□□□□□ -0.63	not detected
MRP20	YDR405W	BUD2	P33314	1104 aa		11.09	□□□□□ -0.63
MRP20	YDR405W	GUA1	P38625	525 aa	Known RBP	11.09	□□□□□ -0.63
MRP20	YDR405W	BDH2	P39713	417 aa		11.09	□□□□□ -0.63
MRP20	YDR405W	HYR1	P40581	163 aa	Known RBP	11.09	□□□□□ -0.63
MRP20	YDR405W	HST1	P53685	503 aa		11.09	□□□□□ -0.63
MRP20	YDR405W	HFI1	Q12060	488 aa		11.09	□□□□□ -0.63
MRP20	YDR405W	BMH1	P29311	267 aa	Known RBP	11.08	□□□□□ -0.64
MRP20	YDR405W	ATG19	P35193	415 aa		11.08	□□□□□ -0.64
MRP20	YDR405W	POA1	P38218	177 aa		11.08	□□□□□ -0.64
MRP20	YDR405W	RPN3	P40016	523 aa	Known RBP	11.08	□□□□□ -0.64
MRP20	YDR405W	JJJ3	P47138	172 aa		11.08	□□□□□ -0.64
MRP20	YDR405W	SGM1	P47166	707 aa		11.08	□□□□□ -0.64
MRP20	YDR405W	UBA2	P52488	636 aa		11.08	□□□□□ -0.64
MRP20	YDR405W	ROD1	Q02805	837 aa		11.08	□□□□□ -0.64
MRP20	YDR405W	COQ9	Q05779	260 aa		11.08	□□□□□ -0.64
MRP20	YDR405W	VPS13	Q07878	3144 aa		11.08	□□□□□ -0.64
MRP20	YDR405W	HIS4	P00815	799 aa	Known RBP	11.07	□□□□□ -0.64
MRP20	YDR405W	RPL22A	P05749	121 aa	Known RBP	11.07	□□□□□ -0.64
MRP20	YDR405W	FUB1	P25659	250 aa		11.07	□□□□□ -0.64
MRP20	YDR405W	SIP3	P38717	1229 aa		11.07	□□□□□ -0.64
MRP20	YDR405W	BRL1	P38770	471 aa		11.07	□□□□□ -0.64
MRP20	YDR405W	VTC2	P43585	828 aa		11.07	□□□□□ -0.64
MRP20	YDR405W	FOL2	P51601	243 aa	Known RBP	11.07	□□□□□ -0.64
MRP20	YDR405W	SEC5	P89102	971 aa		11.07	□□□□□ -0.64
MRP20	YDR405W	ADY4	Q05955	493 aa		11.07	□□□□□ -0.64
MRP20	YDR405W	DED1	P06634	604 aa	Known RBP	11.06	□□□□□ -0.64
MRP20	YDR405W	YEL076C-A	P0CX16	216 aa		11.06	□□□□□ -0.64
MRP20	YDR405W	YLR464W	P0CX17	216 aa		11.06	□□□□□ -0.64
MRP20	YDR405W	VPS35	P34110	944 aa		11.06	□□□□□ -0.64
MRP20	YDR405W	PET10	P36139	283 aa		11.06	□□□□□ -0.64
MRP20	YDR405W	YEL076C	P39971	216 aa		11.06	□□□□□ -0.64
MRP20	YDR405W	EAF5	P39995	279 aa		11.06	□□□□□ -0.64
MRP20	YDR405W	NCS2	P53923	493 aa	Predicted RBP	11.06	□□□□□ -0.64
MRP20	YDR405W	PEX19	Q07418	342 aa		11.06	□□□□□ -0.64
MRP20	YDR405W	ELM1	P32801	640 aa		11.05	□□□□□ -0.64
MRP20	YDR405W	DID4	P36108	232 aa		11.05	□□□□□ -0.64
MRP20	YDR405W	DJP1	P40564	432 aa		11.05	□□□□□ -0.64
MRP20	YDR405W	SPO74	P45819	413 aa		11.05	□□□□□ -0.64
MRP20	YDR405W	FKS1	P38631	1876 aa	Known RBP	11.04	□□□□□ -0.64
MRP20	YDR405W	ISY1	P21374	235 aa	Predicted RBP	11.04	□□□□□ -0.64
MRP20	YDR405W	MBR1	P23493	339 aa		11.04	□□□□□ -0.64
MRP20	YDR405W	MSP1	P28737	362 aa		11.04	□□□□□ -0.64
MRP20	YDR405W	PIH1	P38768	344 aa		11.04	□□□□□ -0.64
MRP20	YDR405W	ACF4	P47129	309 aa		11.04	□□□□□ -0.64
MRP20	YDR405W	COG8	Q04632	607 aa		11.04	□□□□□ -0.64
MRP20	YDR405W	SWI6	P09959	803 aa		11.03	□□□□□ -0.64
MRP20	YDR405W	PFK1	P16861	987 aa	Known RBP	11.03	□□□□□ -0.64
MRP20	YDR405W	DBP5	P20449	482 aa	Known RBP	11.03	□□□□□ -0.64
MRP20	YDR405W	RPC53	P25441	422 aa		11.03	□□□□□ -0.64
MRP20	YDR405W	RAM2	P29703	316 aa		11.03	□□□□□ -0.64
MRP20	YDR405W	COT1	P32798	439 aa		11.03	□□□□□ -0.64
MRP20	YDR405W	TVP23	P38962	199 aa		11.03	□□□□□ -0.64
MRP20	YDR405W	YGL081W	P53156	320 aa		11.03	□□□□□ -0.64
MRP20	YDR405W	YGR035C	P53222	116 aa		11.03	□□□□□ -0.64
MRP20	YDR405W	CUR1	Q06469	252 aa		11.03	□□□□□ -0.64
MRP20	YDR405W	NOC3	Q07896	663 aa	Predicted RBP	11.03	□□□□□ -0.64
MRP20	YDR405W	DPH2	P32461	534 aa		11.02	□□□□□ -0.65
MRP20	YDR405W	HIR1	P32479	840 aa		11.02	□□□□□ -0.65
MRP20	YDR405W	ULP2	P40537	1034 aa	Predicted RBP	11.02	□□□□□ -0.65
MRP20	YDR405W	ETT1	Q08421	412 aa	Known RBP	11.02	□□□□□ -0.65
MRP20	YDR405W	OSW2	Q12202	724 aa		11.02	□□□□□ -0.65
MRP20	YDR405W	PCK1	P10963	549 aa		11.01	□□□□□ -0.65
MRP20	YDR405W	WHI2	P12611	486 aa		11.01	□□□□□ -0.65
MRP20	YDR405W	INP51	P40559	946 aa	Known RBP	11.01	□□□□□ -0.65
MRP20	YDR405W	GUP1	P53154	560 aa		11.01	□□□□□ -0.65
MRP20	YDR405W	CAF130	P53280	1122 aa	Predicted RBP	11.01	□□□□□ -0.65
MRP20	YDR405W	YNL115C	P53925	644 aa		11.01	□□□□□ -0.65

Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms