RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W IES3Q12345 250 aa4.5□□□□□ -1.69
TRS85YDR108W GPR1Q12361 961 aa4.5□□□□□ -1.69
TRS85YDR108W HTZ1Q12692 134 aaKnown RBP4.5□□□□□ -1.69
TRS85YDR108W STE6P12866 1290 aa4.5□□□□□ -1.69
TRS85YDR108W CMP2P14747 604 aa4.5□□□□□ -1.69
TRS85YDR108W MBR1P23493 339 aa4.5□□□□□ -1.69
TRS85YDR108W RPC34P32910 317 aa4.5□□□□□ -1.69
TRS85YDR108W MRP8P35719 219 aa4.5□□□□□ -1.69
TRS85YDR108W KES1P35844 434 aaKnown RBP4.5□□□□□ -1.69
TRS85YDR108W YBR242WP38331 238 aa4.5□□□□□ -1.69
TRS85YDR108W JJJ2P46997 583 aa4.5□□□□□ -1.69
TRS85YDR108W KEL2P50090 882 aa4.5□□□□□ -1.69
TRS85YDR108W ARI1P53111 347 aaKnown RBP4.5□□□□□ -1.69
TRS85YDR108W MAL13P53338 473 aa4.5□□□□□ -1.69
TRS85YDR108W HPC2Q01448 625 aa4.5□□□□□ -1.69
TRS85YDR108W RAT1Q02792 1006 aaKnown RBP4.5□□□□□ -1.69
TRS85YDR108W POB3Q04636 552 aaKnown RBP4.5□□□□□ -1.69
TRS85YDR108W YLR177WQ06251 628 aa4.5□□□□□ -1.69
TRS85YDR108W YLH47Q06493 454 aa4.5□□□□□ -1.69
TRS85YDR108W ARR2Q06597 130 aa4.5□□□□□ -1.69
TRS85YDR108W ULS1Q08562 1619 aa4.49□□□□□ -1.69
TRS85YDR108W CDC25P04821 1589 aa4.49□□□□□ -1.69
TRS85YDR108W RAD1P06777 1100 aa4.49□□□□□ -1.69
TRS85YDR108W RSR1P13856 272 aa4.49□□□□□ -1.69
TRS85YDR108W SNF2P22082 1703 aa4.49□□□□□ -1.69
TRS85YDR108W SEC21P32074 935 aaKnown RBP4.49□□□□□ -1.69
TRS85YDR108W STE5P32917 917 aa4.49□□□□□ -1.69
TRS85YDR108W HCS1P34243 683 aa4.49□□□□□ -1.69
TRS85YDR108W CSE4P36012 229 aa4.49□□□□□ -1.69
TRS85YDR108W APD1P38281 316 aa4.49□□□□□ -1.69
TRS85YDR108W CAJ1P39101 391 aa4.49□□□□□ -1.69
TRS85YDR108W VTC2P43585 828 aa4.49□□□□□ -1.69
TRS85YDR108W MSB3P48566 633 aaPredicted RBP4.49□□□□□ -1.69
TRS85YDR108W IMD4P50094 524 aaKnown RBP4.49□□□□□ -1.69
TRS85YDR108W ZDS1P50111 915 aaKnown RBP4.49□□□□□ -1.69
TRS85YDR108W KXD1P53158 218 aa4.49□□□□□ -1.69
TRS85YDR108W UTP22P53254 1237 aaPredicted RBP4.49□□□□□ -1.69
TRS85YDR108W COG6P53959 839 aa4.49□□□□□ -1.69
TRS85YDR108W BDF2Q07442 638 aa4.49□□□□□ -1.69
TRS85YDR108W RIO1Q12196 484 aaKnown RBP4.49□□□□□ -1.69
TRS85YDR108W PHO84P25297 587 aaKnown RBP4.49□□□□□ -1.69
TRS85YDR108W PUF4P25339 888 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
TRS85YDR108W HEM3P28789 327 aa4.49□□□□□ -1.69
TRS85YDR108W ITR2P30606 609 aa4.49□□□□□ -1.69
TRS85YDR108W YEL043WP32618 956 aa4.49□□□□□ -1.69
TRS85YDR108W BOI1P38041 980 aaKnown RBP4.49□□□□□ -1.69
TRS85YDR108W MUM2P38236 366 aa4.49□□□□□ -1.69
TRS85YDR108W YHB1P39676 399 aaKnown RBP4.49□□□□□ -1.69
TRS85YDR108W RLP7P40693 322 aaKnown RBP4.49□□□□□ -1.69
TRS85YDR108W GCD10P41814 478 aa4.49□□□□□ -1.69
TRS85YDR108W GCD14P46959 383 aaPredicted RBP4.49□□□□□ -1.69
TRS85YDR108W RRP46P53256 223 aaPredicted RBP4.49□□□□□ -1.69
TRS85YDR108W FPK1P53739 893 aa4.49□□□□□ -1.69
TRS85YDR108W ELA1P53861 379 aaPredicted RBP4.49□□□□□ -1.69
TRS85YDR108W MUB1Q03162 620 aa4.49□□□□□ -1.69
TRS85YDR108W SPO71Q03868 1245 aa4.49□□□□□ -1.69
TRS85YDR108W SYF1Q04048 859 aaPredicted RBP4.49□□□□□ -1.69
TRS85YDR108W JIP5Q06214 492 aaPredicted RBP4.49□□□□□ -1.69
TRS85YDR108W PMT7Q06644 662 aa4.49□□□□□ -1.69
TRS85YDR108W YCG1Q06680 1035 aa4.49□□□□□ -1.69
TRS85YDR108W APL4Q12028 832 aa4.49□□□□□ -1.69
TRS85YDR108W CEX1Q12453 761 aa4.49□□□□□ -1.69
TRS85YDR108W YRF1-4O13559 1382 aa4.48□□□□□ -1.69
TRS85YDR108W SNT2P53127 1403 aa4.48□□□□□ -1.69
TRS85YDR108W YPR089WO13585 888 aa4.48□□□□□ -1.69
TRS85YDR108W REP1P03871 373 aa4.48□□□□□ -1.69
TRS85YDR108W PKC1P24583 1151 aa4.48□□□□□ -1.69
TRS85YDR108W FZO1P38297 855 aa4.48□□□□□ -1.69
TRS85YDR108W YHR020WP38708 688 aaKnown RBP4.48□□□□□ -1.69
TRS85YDR108W SWD1P39706 426 aa4.48□□□□□ -1.69
TRS85YDR108W SCS2P40075 244 aaKnown RBP4.48□□□□□ -1.69
TRS85YDR108W MDJ2P42834 146 aa4.48□□□□□ -1.69
TRS85YDR108W MIC19P43594 170 aa4.48□□□□□ -1.69
TRS85YDR108W IOC3P43596 787 aa4.48□□□□□ -1.69
TRS85YDR108W MON1P53129 644 aa4.48□□□□□ -1.69
TRS85YDR108W ERP6P53198 216 aa4.48□□□□□ -1.69
TRS85YDR108W ADA2Q02336 434 aa4.48□□□□□ -1.69
TRS85YDR108W TRS120Q04183 1289 aa4.48□□□□□ -1.69
TRS85YDR108W MCP2Q06567 569 aa4.48□□□□□ -1.69
TRS85YDR108W TMA16Q08687 178 aa4.48□□□□□ -1.69
TRS85YDR108W OCA6Q12454 224 aa4.48□□□□□ -1.69
TRS85YDR108W LSO2Q3E772 92 aaKnown RBP4.48□□□□□ -1.69
TRS85YDR108W KRE5P22023 1365 aa4.48□□□□□ -1.69
TRS85YDR108W BNR1P40450 1375 aa4.48□□□□□ -1.69
TRS85YDR108W SLY41P22215 453 aa4.47□□□□□ -1.69
TRS85YDR108W MRPL25P23369 157 aa4.47□□□□□ -1.69
TRS85YDR108W RRP43P25359 394 aaPredicted RBP4.47□□□□□ -1.69
TRS85YDR108W SCT1P32784 759 aa4.47□□□□□ -1.69
TRS85YDR108W HXT5P38695 592 aa4.47□□□□□ -1.69
TRS85YDR108W REV7P38927 245 aa4.47□□□□□ -1.69
TRS85YDR108W KAP123P40069 1113 aaKnown RBP4.47□□□□□ -1.69
TRS85YDR108W ALG2P43636 503 aa4.47□□□□□ -1.69
TRS85YDR108W IML2P47031 731 aa4.47□□□□□ -1.69
TRS85YDR108W PCL10P53124 433 aa4.47□□□□□ -1.69
TRS85YDR108W PRP43P53131 767 aaKnown RBP4.47□□□□□ -1.69
TRS85YDR108W SQS1P53866 767 aaKnown RBP4.47□□□□□ -1.69
TRS85YDR108W YNL144CP53907 740 aa4.47□□□□□ -1.69
TRS85YDR108W YAF9P53930 226 aa4.47□□□□□ -1.69
TRS85YDR108W HEF3P53978 1044 aaKnown RBP4.47□□□□□ -1.69
TRS85YDR108W CIK1Q01649 594 aa4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms