RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C YFL054CP43549 646 aa6.25□□□□□ -1.41
RRI1YDL216C ATG13Q06628 738 aa6.25□□□□□ -1.41
RRI1YDL216C PRP9P19736 530 aaKnown RBP6.25□□□□□ -1.41
RRI1YDL216C TAT2P38967 592 aa6.25□□□□□ -1.41
RRI1YDL216C SPO75Q07798 868 aa6.25□□□□□ -1.41
RRI1YDL216C STE5P32917 917 aa6.24□□□□□ -1.41
RRI1YDL216C YBR184WP38299 523 aa6.24□□□□□ -1.41
RRI1YDL216C RRT14P40470 206 aa6.24□□□□□ -1.41
RRI1YDL216C YDL177CQ12257 170 aa6.24□□□□□ -1.41
RRI1YDL216C THI80P35202 319 aa6.23□□□□□ -1.41
RRI1YDL216C OCA5P38738 679 aa6.23□□□□□ -1.41
RRI1YDL216C TPO2P53283 614 aa6.23□□□□□ -1.41
RRI1YDL216C SRP1Q02821 542 aaKnown RBP6.23□□□□□ -1.41
RRI1YDL216C YLL058WQ12198 575 aa6.23□□□□□ -1.41
RRI1YDL216C BI4P03879 638 aa6.22□□□□□ -1.41
RRI1YDL216C RAD4P14736 754 aa6.22□□□□□ -1.41
RRI1YDL216C RFC5P38251 354 aa6.22□□□□□ -1.41
RRI1YDL216C GUS1P46655 708 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
RRI1YDL216C MRPL22P53881 309 aa6.22□□□□□ -1.41
RRI1YDL216C SVS1Q12254 260 aa6.22□□□□□ -1.41
RRI1YDL216C YOL098CQ12496 1037 aa6.22□□□□□ -1.41
RRI1YDL216C ACE2P21192 770 aa6.21□□□□□ -1.42
RRI1YDL216C ERP6P53198 216 aa6.21□□□□□ -1.42
RRI1YDL216C RSM24Q03976 319 aa6.21□□□□□ -1.42
RRI1YDL216C FMP25Q08023 583 aa6.21□□□□□ -1.42
RRI1YDL216C ESC8Q08119 714 aa6.21□□□□□ -1.42
RRI1YDL216C OSH2Q12451 1283 aa6.21□□□□□ -1.42
RRI1YDL216C KIN2P13186 1147 aaKnown RBP6.2□□□□□ -1.42
RRI1YDL216C PRP6P19735 899 aaPredicted RBP6.2□□□□□ -1.42
RRI1YDL216C YCR015CP25616 317 aa6.2□□□□□ -1.42
RRI1YDL216C ETP1P38748 585 aaKnown RBP6.2□□□□□ -1.42
RRI1YDL216C TIM54P47045 478 aa6.2□□□□□ -1.42
RRI1YDL216C DUS3Q06053 668 aaKnown RBP6.2□□□□□ -1.42
RRI1YDL216C STI1P15705 589 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
RRI1YDL216C RPL8BP29453 256 aaKnown RBP6.19□□□□□ -1.42
RRI1YDL216C AIM3P38266 947 aaKnown RBP6.19□□□□□ -1.42
RRI1YDL216C SAH1P39954 449 aaKnown RBP6.19□□□□□ -1.42
RRI1YDL216C PFD1P46988 109 aa6.19□□□□□ -1.42
RRI1YDL216C UTP8P53276 713 aaKnown RBP6.19□□□□□ -1.42
RRI1YDL216C NSE3Q05541 303 aa6.19□□□□□ -1.42
RRI1YDL216C HRQ1Q05549 1077 aa6.19□□□□□ -1.42
RRI1YDL216C YDR306CQ06640 478 aa6.19□□□□□ -1.42
RRI1YDL216C PPH3P32345 308 aa6.18□□□□□ -1.42
RRI1YDL216C CDC12P32468 407 aaKnown RBP6.18□□□□□ -1.42
RRI1YDL216C TAF1P46677 1066 aa6.18□□□□□ -1.42
RRI1YDL216C EAF1Q06337 982 aa6.18□□□□□ -1.42
RRI1YDL216C CDC53Q12018 815 aaKnown RBP6.18□□□□□ -1.42
RRI1YDL216C HSP60P19882 572 aaKnown RBP6.17□□□□□ -1.42
RRI1YDL216C AAR2P32357 355 aaPredicted RBP6.17□□□□□ -1.42
RRI1YDL216C CDC11P32458 415 aa6.17□□□□□ -1.42
RRI1YDL216C YKL222CP35995 705 aa6.17□□□□□ -1.42
RRI1YDL216C YKL151CP36059 337 aa6.17□□□□□ -1.42
RRI1YDL216C ALR2P43553 858 aa6.17□□□□□ -1.42
RRI1YDL216C SNO2P53823 222 aa6.17□□□□□ -1.42
RRI1YDL216C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
RRI1YDL216C BDF2Q07442 638 aa6.17□□□□□ -1.42
RRI1YDL216C MDM38Q08179 573 aa6.17□□□□□ -1.42
RRI1YDL216C ADE8P04161 214 aa6.16□□□□□ -1.42
RRI1YDL216C APL1P27351 700 aa6.16□□□□□ -1.42
RRI1YDL216C SRP40P32583 406 aaPredicted RBP6.16□□□□□ -1.42
RRI1YDL216C ABZ1P37254 787 aaPredicted RBP6.16□□□□□ -1.42
RRI1YDL216C SIT1P39980 628 aa6.16□□□□□ -1.42
RRI1YDL216C IOC3P43596 787 aa6.16□□□□□ -1.42
RRI1YDL216C MTC3P53077 123 aa6.16□□□□□ -1.42
RRI1YDL216C HUL5P53119 910 aa6.16□□□□□ -1.42
RRI1YDL216C YOR131CQ12486 218 aa6.16□□□□□ -1.42
RRI1YDL216C ARE1P25628 610 aa6.15□□□□□ -1.43
RRI1YDL216C FUN30P31380 1131 aa6.15□□□□□ -1.43
RRI1YDL216C HFM1P51979 1187 aa6.15□□□□□ -1.43
RRI1YDL216C RIM8P53179 542 aa6.15□□□□□ -1.43
RRI1YDL216C YGR125WP53273 1036 aa6.15□□□□□ -1.43
RRI1YDL216C SIZ1Q04195 904 aa6.15□□□□□ -1.43
RRI1YDL216C YOR352WQ08816 343 aa6.15□□□□□ -1.43
RRI1YDL216C FLC1Q08967 793 aa6.15□□□□□ -1.43
RRI1YDL216C OSW2Q12202 724 aa6.15□□□□□ -1.43
RRI1YDL216C CIT1P00890 479 aa6.14□□□□□ -1.43
RRI1YDL216C YHR020WP38708 688 aaKnown RBP6.14□□□□□ -1.43
RRI1YDL216C SRT1Q03175 343 aa6.14□□□□□ -1.43
RRI1YDL216C YTA7P40340 1379 aa6.13□□□□□ -1.43
RRI1YDL216C CYC1P00044 109 aaPredicted RBP6.13□□□□□ -1.43
RRI1YDL216C HBS1P32769 611 aaKnown RBP6.13□□□□□ -1.43
RRI1YDL216C YKR078WP36158 585 aaKnown RBP6.13□□□□□ -1.43
RRI1YDL216C FLR1P38124 548 aa6.13□□□□□ -1.43
RRI1YDL216C GGA2P38817 585 aaKnown RBP6.13□□□□□ -1.43
RRI1YDL216C CCC2P38995 1004 aa6.13□□□□□ -1.43
RRI1YDL216C GIP4P39732 760 aa6.13□□□□□ -1.43
RRI1YDL216C HUL4P40985 892 aa6.13□□□□□ -1.43
RRI1YDL216C RIB2Q12362 591 aaKnown RBP6.13□□□□□ -1.43
RRI1YDL216C RPC82P32349 654 aa6.12□□□□□ -1.43
RRI1YDL216C GIC1P38785 314 aa6.12□□□□□ -1.43
RRI1YDL216C YAP1801P38856 637 aa6.12□□□□□ -1.43
RRI1YDL216C MSC2Q03455 724 aa6.12□□□□□ -1.43
RRI1YDL216C SGD1Q06132 899 aa6.12□□□□□ -1.43
RRI1YDL216C UBX5Q06682 500 aa6.12□□□□□ -1.43
RRI1YDL216C YPL277CQ08989 487 aa6.12□□□□□ -1.43
RRI1YDL216C SOD2P00447 233 aa6.11□□□□□ -1.43
RRI1YDL216C CMP2P14747 604 aa6.11□□□□□ -1.43
RRI1YDL216C GAL11P19659 1081 aa6.11□□□□□ -1.43
RRI1YDL216C YKL091CP33324 310 aaKnown RBP6.11□□□□□ -1.43
RRI1YDL216C YRO2P38079 344 aa6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms