RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	HXT13	P39924	564 aa		6.59	□□□□□ -1.35
RPC53	YDL150W	FOL2	P51601	243 aa	Known RBP	6.59	□□□□□ -1.35
RPC53	YDL150W	HXT17	P53631	564 aa		6.59	□□□□□ -1.35
RPC53	YDL150W	HXT15	P54854	567 aa		6.59	□□□□□ -1.35
RPC53	YDL150W	YPL260W	Q08977	551 aa		6.59	□□□□□ -1.35
RPC53	YDL150W	MLP2	P40457	1679 aa		6.58	□□□□□ -1.36
RPC53	YDL150W	COQ4	O13525	335 aa		6.58	□□□□□ -1.36
RPC53	YDL150W	SOD2	P00447	233 aa		6.58	□□□□□ -1.36
RPC53	YDL150W	AIM26	P32858	118 aa		6.58	□□□□□ -1.36
RPC53	YDL150W	AIM3	P38266	947 aa	Known RBP	6.58	□□□□□ -1.36
RPC53	YDL150W	NOP7	P53261	605 aa	Known RBP	6.58	□□□□□ -1.36
RPC53	YDL150W	TNA1	P53322	534 aa		6.58	□□□□□ -1.36
RPC53	YDL150W	HOS3	Q02959	697 aa	Known RBP	6.58	□□□□□ -1.36
RPC53	YDL150W	NBA1	Q08229	501 aa	Known RBP	6.58	□□□□□ -1.36
RPC53	YDL150W	PDR12	Q02785	1511 aa		6.58	□□□□□ -1.36
RPC53	YDL150W	PDR10	P51533	1564 aa		6.57	□□□□□ -1.36
RPC53	YDL150W	MKK2	P32491	506 aa		6.57	□□□□□ -1.36
RPC53	YDL150W	PIK1	P39104	1066 aa		6.57	□□□□□ -1.36
RPC53	YDL150W	SNO2	P53823	222 aa		6.57	□□□□□ -1.36
RPC53	YDL150W	ROD1	Q02805	837 aa		6.57	□□□□□ -1.36
RPC53	YDL150W	IQG1	Q12280	1495 aa		6.57	□□□□□ -1.36
RPC53	YDL150W	YTA7	P40340	1379 aa		6.57	□□□□□ -1.36
RPC53	YDL150W	ATE1	P16639	503 aa		6.56	□□□□□ -1.36
RPC53	YDL150W	FLR1	P38124	548 aa		6.56	□□□□□ -1.36
RPC53	YDL150W	CCZ1	P38273	704 aa		6.56	□□□□□ -1.36
RPC53	YDL150W	RPS26A	P39938	119 aa	Known RBP	6.56	□□□□□ -1.36
RPC53	YDL150W	RPS26B	P39939	119 aa	Known RBP	6.56	□□□□□ -1.36
RPC53	YDL150W	TAF1	P46677	1066 aa		6.56	□□□□□ -1.36
RPC53	YDL150W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.56	□□□□□ -1.36	RIP-Chip
RPC53	YDL150W	DED1	P06634	604 aa	Known RBP	6.55	□□□□□ -1.36
RPC53	YDL150W	SPS1	P08458	490 aa		6.55	□□□□□ -1.36
RPC53	YDL150W	SEC8	P32855	1065 aa		6.55	□□□□□ -1.36
RPC53	YDL150W	GPB2	P39717	880 aa		6.55	□□□□□ -1.36
RPC53	YDL150W	RAT1	Q02792	1006 aa	Known RBP	6.55	□□□□□ -1.36
RPC53	YDL150W	RGD1	P38339	666 aa		6.54	□□□□□ -1.36
RPC53	YDL150W	YPL277C	Q08989	487 aa		6.54	□□□□□ -1.36
RPC53	YDL150W	SPO21	Q12411	609 aa		6.54	□□□□□ -1.36
RPC53	YDL150W	MCM2	P29469	868 aa		6.53	□□□□□ -1.36
RPC53	YDL150W	YDR132C	Q03900	495 aa		6.53	□□□□□ -1.36
RPC53	YDL150W	SVF1	Q05515	481 aa		6.53	□□□□□ -1.36
RPC53	YDL150W	GDB1	Q06625	1536 aa		6.53	□□□□□ -1.36
RPC53	YDL150W	NUP157	P40064	1391 aa	Known RBP	6.53	□□□□□ -1.36
RPC53	YDL150W	YKL222C	P35995	705 aa		6.52	□□□□□ -1.37
RPC53	YDL150W	GIP4	P39732	760 aa		6.52	□□□□□ -1.37
RPC53	YDL150W	FYV10	P40492	516 aa		6.52	□□□□□ -1.37
RPC53	YDL150W	SEC26	P41810	973 aa	Known RBP	6.52	□□□□□ -1.37
RPC53	YDL150W	BUD3	P25558	1636 aa		6.51	□□□□□ -1.37
RPC53	YDL150W	RPS13	P05756	151 aa	Known RBP	6.51	□□□□□ -1.37
RPC53	YDL150W	GCR1	P07261	785 aa		6.51	□□□□□ -1.37
RPC53	YDL150W	ABZ1	P37254	787 aa	Predicted RBP	6.51	□□□□□ -1.37
RPC53	YDL150W	CNN1	P43618	361 aa		6.51	□□□□□ -1.37
RPC53	YDL150W	HNT2	P49775	206 aa		6.51	□□□□□ -1.37
RPC53	YDL150W	MRL1	Q06815	381 aa		6.51	□□□□□ -1.37
RPC53	YDL150W	DBP5	P20449	482 aa	Known RBP	6.5	□□□□□ -1.37
RPC53	YDL150W	NAP1	P25293	417 aa	Known RBP	6.5	□□□□□ -1.37
RPC53	YDL150W	SYP1	P25623	870 aa	Known RBP	6.5	□□□□□ -1.37
RPC53	YDL150W	PAM1	P37304	830 aa	Known RBP	6.5	□□□□□ -1.37
RPC53	YDL150W	ESF1	Q06344	628 aa	Known RBP	6.5	□□□□□ -1.37
RPC53	YDL150W	PDR15	Q04182	1529 aa	Known RBP	6.5	□□□□□ -1.37
RPC53	YDL150W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	6.49	□□□□□ -1.37	not detected
RPC53	YDL150W	OYE2	Q03558	400 aa	Known RBP	6.49	□□□□□ -1.37
RPC53	YDL150W	SPR28	Q04921	423 aa		6.49	□□□□□ -1.37
RPC53	YDL150W	TOD6	P34219	525 aa		6.48	□□□□□ -1.37
RPC53	YDL150W	MPH1	P40562	993 aa		6.48	□□□□□ -1.37
RPC53	YDL150W	RMD1	Q03441	430 aa		6.48	□□□□□ -1.37
RPC53	YDL150W	SGD1	Q06132	899 aa		6.48	□□□□□ -1.37
RPC53	YDL150W	RSB1	Q08417	382 aa		6.48	□□□□□ -1.37
RPC53	YDL150W	YER152C	P10356	443 aa		6.47	□□□□□ -1.37
RPC53	YDL150W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	6.47	□□□□□ -1.37	not detected
RPC53	YDL150W	MLS1	P30952	554 aa		6.46	□□□□□ -1.38
RPC53	YDL150W	LAM1	P38851	1228 aa		6.46	□□□□□ -1.38
RPC53	YDL150W	ATG13	Q06628	738 aa		6.46	□□□□□ -1.38
RPC53	YDL150W	RTT10	Q08924	1013 aa		6.46	□□□□□ -1.38
RPC53	YDL150W	ARO1	P08566	1588 aa	Known RBP	6.45	□□□□□ -1.38
RPC53	YDL150W	RER2	P35196	286 aa		6.45	□□□□□ -1.38
RPC53	YDL150W	MEF2	P39677	819 aa		6.45	□□□□□ -1.38
RPC53	YDL150W	YFL054C	P43549	646 aa		6.45	□□□□□ -1.38
RPC53	YDL150W	GCN5	Q03330	439 aa		6.45	□□□□□ -1.38
RPC53	YDL150W	CLU1	Q03690	1277 aa	Known RBP	6.45	□□□□□ -1.38
RPC53	YDL150W	DNF3	Q12674	1656 aa		6.45	□□□□□ -1.38
RPC53	YDL150W	CYC1	P00044	109 aa	Predicted RBP	6.44	□□□□□ -1.38
RPC53	YDL150W	DUS4	Q06063	367 aa		6.44	□□□□□ -1.38
RPC53	YDL150W	YLR358C	O13565	187 aa		6.43	□□□□□ -1.38
RPC53	YDL150W	DOM34	P33309	386 aa		6.43	□□□□□ -1.38
RPC53	YDL150W	DUT1	P33317	147 aa		6.43	□□□□□ -1.38
RPC53	YDL150W	YAP3	P38749	330 aa		6.43	□□□□□ -1.38
RPC53	YDL150W	RIB2	Q12362	591 aa	Known RBP	6.43	□□□□□ -1.38
RPC53	YDL150W	CHC1	P22137	1653 aa	Known RBP	6.42	□□□□□ -1.38
RPC53	YDL150W	SRM1	P21827	482 aa		6.42	□□□□□ -1.38
RPC53	YDL150W	RFC5	P38251	354 aa		6.42	□□□□□ -1.38
RPC53	YDL150W	PLB2	Q03674	706 aa		6.42	□□□□□ -1.38
RPC53	YDL150W	TIF35	Q04067	274 aa	Known RBP	6.42	□□□□□ -1.38
RPC53	YDL150W	SIZ1	Q04195	904 aa		6.42	□□□□□ -1.38
RPC53	YDL150W	TMA46	Q12000	345 aa	Known RBP	6.42	□□□□□ -1.38
RPC53	YDL150W	GNT1	Q12096	491 aa		6.42	□□□□□ -1.38
RPC53	YDL150W	RAD27	P26793	382 aa		6.41	□□□□□ -1.38
RPC53	YDL150W	RSM24	Q03976	319 aa		6.41	□□□□□ -1.38
RPC53	YDL150W	YOR352W	Q08816	343 aa		6.4	□□□□□ -1.38
RPC53	YDL150W	CTS1	P29029	562 aa		6.39	□□□□□ -1.39
RPC53	YDL150W	SPT20	P50875	604 aa		6.39	□□□□□ -1.39

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms