RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W YML083CQ04526 418 aa2.76□□□□□ -1.97
UBP1YDL122W PUP1P25043 261 aa2.76□□□□□ -1.97
UBP1YDL122W CDC48P25694 835 aaKnown RBP2.76□□□□□ -1.97
UBP1YDL122W AAD14P42884 376 aa2.76□□□□□ -1.97
UBP1YDL122W RSM26P47141 266 aa2.76□□□□□ -1.97
UBP1YDL122W PIB2P53191 635 aa2.76□□□□□ -1.97
UBP1YDL122W YNR061CP53747 219 aa2.76□□□□□ -1.97
UBP1YDL122W ESF1Q06344 628 aaKnown RBP2.76□□□□□ -1.97
UBP1YDL122W MYO1P08964 1928 aa2.75□□□□□ -1.97
UBP1YDL122W SUP45P12385 437 aaKnown RBP2.75□□□□□ -1.97
UBP1YDL122W MIC60P36112 540 aa2.75□□□□□ -1.97
UBP1YDL122W PEX28P38848 579 aa2.75□□□□□ -1.97
UBP1YDL122W LSB6P42951 607 aa2.75□□□□□ -1.97
UBP1YDL122W LSC2P53312 427 aa2.75□□□□□ -1.97
UBP1YDL122W SOL4P53315 255 aa2.75□□□□□ -1.97
UBP1YDL122W HEF3P53978 1044 aaKnown RBP2.75□□□□□ -1.97
UBP1YDL122W TRM11Q12463 433 aa2.75□□□□□ -1.97
UBP1YDL122W PRP8P33334 2413 aaKnown RBP2.75□□□□□ -1.97
UBP1YDL122W HIS5P07172 385 aa2.74□□□□□ -1.97
UBP1YDL122W MAK16P10962 306 aaPredicted RBP2.74□□□□□ -1.97
UBP1YDL122W TEC1P18412 486 aa2.74□□□□□ -1.97
UBP1YDL122W SFP1P32432 683 aa2.74□□□□□ -1.97
UBP1YDL122W ASF1P32447 279 aa2.74□□□□□ -1.97
UBP1YDL122W SUV3P32580 737 aa2.74□□□□□ -1.97
UBP1YDL122W UBP12P39538 1254 aa2.74□□□□□ -1.97
UBP1YDL122W SCW11P53189 542 aa2.74□□□□□ -1.97
UBP1YDL122W NAF1P53919 492 aaKnown RBP2.74□□□□□ -1.97
UBP1YDL122W UBP2Q01476 1272 aa2.74□□□□□ -1.97
UBP1YDL122W RMD1Q03441 430 aa2.74□□□□□ -1.97
UBP1YDL122W VPS13Q07878 3144 aa2.74□□□□□ -1.97
UBP1YDL122W ENO1P00924 437 aaKnown RBP2.74□□□□□ -1.97
UBP1YDL122W STE4P18851 423 aa2.74□□□□□ -1.97
UBP1YDL122W SPT5P27692 1063 aaKnown RBP2.74□□□□□ -1.97
UBP1YDL122W UTR4P32626 227 aa2.74□□□□□ -1.97
UBP1YDL122W BUD2P33314 1104 aa2.74□□□□□ -1.97
UBP1YDL122W TFC4P33339 1025 aa2.74□□□□□ -1.97
UBP1YDL122W LEU5P38702 357 aa2.74□□□□□ -1.97
UBP1YDL122W CSM2P40465 213 aa2.74□□□□□ -1.97
UBP1YDL122W YDL124WQ07551 312 aaKnown RBP2.74□□□□□ -1.97
UBP1YDL122W WHI4Q07655 649 aaKnown RBP2.74□□□□□ -1.97
UBP1YDL122W GUD1Q07729 489 aa2.74□□□□□ -1.97
UBP1YDL122W TY1A-BLQ12266 440 aa2.74□□□□□ -1.97
UBP1YDL122W ENO2P00925 437 aaKnown RBP2.73□□□□□ -1.97
UBP1YDL122W YJR008WP47085 338 aa2.73□□□□□ -1.97
UBP1YDL122W CSL4P53859 292 aaPredicted RBP2.73□□□□□ -1.97
UBP1YDL122W SNF1P06782 633 aaKnown RBP2.73□□□□□ -1.97
UBP1YDL122W SNF3P10870 884 aa2.73□□□□□ -1.97
UBP1YDL122W FUS1P11710 512 aa2.73□□□□□ -1.97
UBP1YDL122W APE1P14904 514 aa2.73□□□□□ -1.97
UBP1YDL122W MKS1P34072 584 aa2.73□□□□□ -1.97
UBP1YDL122W TGL4P36165 910 aa2.73□□□□□ -1.97
UBP1YDL122W PPE1P38796 400 aa2.73□□□□□ -1.97
UBP1YDL122W YJR098CP47139 656 aa2.73□□□□□ -1.97
UBP1YDL122W MSC2Q03455 724 aa2.73□□□□□ -1.97
UBP1YDL122W SEC20P28791 383 aa2.72□□□□□ -1.97
UBP1YDL122W GUT2P32191 649 aa2.72□□□□□ -1.97
UBP1YDL122W FAF1P40546 346 aaPredicted RBP2.72□□□□□ -1.97
UBP1YDL122W SBE2P42223 864 aaKnown RBP2.72□□□□□ -1.97
UBP1YDL122W HDA1P53973 706 aa2.72□□□□□ -1.97
UBP1YDL122W SLD5Q03406 294 aa2.72□□□□□ -1.97
UBP1YDL122W MRX10Q05648 414 aa2.72□□□□□ -1.97
UBP1YDL122W STE6P12866 1290 aa2.72□□□□□ -1.97
UBP1YDL122W FBP26P32604 452 aa2.72□□□□□ -1.97
UBP1YDL122W ECM32P32644 1121 aaKnown RBP2.72□□□□□ -1.97
UBP1YDL122W YKL097CP34245 136 aa2.72□□□□□ -1.97
UBP1YDL122W SLX1P38324 304 aa2.72□□□□□ -1.97
UBP1YDL122W TVP23P38962 199 aa2.72□□□□□ -1.97
UBP1YDL122W RIM21P48565 533 aa2.72□□□□□ -1.97
UBP1YDL122W YNL050CP53952 270 aa2.72□□□□□ -1.97
UBP1YDL122W YLR455WQ06188 304 aa2.72□□□□□ -1.97
UBP1YDL122W MNL2Q12205 849 aa2.72□□□□□ -1.97
UBP1YDL122W FMP27Q06179 2628 aa2.72□□□□□ -1.97
UBP1YDL122W MRPL7P36519 292 aa2.71□□□□□ -1.98
UBP1YDL122W PCF11P39081 626 aaPredicted RBP2.71□□□□□ -1.98
UBP1YDL122W PES4P39684 611 aa2.71□□□□□ -1.98
UBP1YDL122W YIR007WP40566 764 aa2.71□□□□□ -1.98
UBP1YDL122W YAT1P80235 687 aa2.71□□□□□ -1.98
UBP1YDL122W FRA1Q07825 749 aa2.71□□□□□ -1.98
UBP1YDL122W BDS1Q08347 646 aa2.71□□□□□ -1.98
UBP1YDL122W YBL113CQ7M4S9 792 aa2.71□□□□□ -1.98
UBP1YDL122W APM2P38700 605 aa2.71□□□□□ -1.98
UBP1YDL122W BFA1P47113 574 aa2.71□□□□□ -1.98
UBP1YDL122W PAP2P53632 584 aaKnown RBP2.71□□□□□ -1.98
UBP1YDL122W DFG5Q05031 458 aa2.71□□□□□ -1.98
UBP1YDL122W PSH1Q12161 406 aa2.71□□□□□ -1.98
UBP1YDL122W ERP3Q12403 225 aa2.71□□□□□ -1.98
UBP1YDL122W RIF1P29539 1916 aa2.71□□□□□ -1.98
UBP1YDL122W PRC1P00729 532 aa2.7□□□□□ -1.98
UBP1YDL122W RPP2BP02400 110 aaKnown RBP2.7□□□□□ -1.98
UBP1YDL122W HMG2P12684 1045 aa2.7□□□□□ -1.98
UBP1YDL122W SLA1P32790 1244 aa2.7□□□□□ -1.98
UBP1YDL122W COY1P34237 679 aa2.7□□□□□ -1.98
UBP1YDL122W PTI1P39927 425 aaPredicted RBP2.7□□□□□ -1.98
UBP1YDL122W MAM1P40065 302 aa2.7□□□□□ -1.98
UBP1YDL122W YFL052WP43551 465 aa2.7□□□□□ -1.98
UBP1YDL122W YPP1P46951 817 aa2.7□□□□□ -1.98
UBP1YDL122W VTC4P47075 721 aa2.7□□□□□ -1.98
UBP1YDL122W PIP2P52960 996 aa2.7□□□□□ -1.98
UBP1YDL122W ITC1P53125 1264 aa2.7□□□□□ -1.98
UBP1YDL122W LIF1P53150 421 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms