RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W GDH2P33327 1092 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W FLC2P39719 783 aa2.18□□□□□ -2.06
USO1YDL058W GVP36P40531 326 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W INP51P40559 946 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W SUM1P46676 1062 aa2.18□□□□□ -2.06
USO1YDL058W MOG1P47123 218 aa2.18□□□□□ -2.06
USO1YDL058W ATH1P48016 1211 aa2.18□□□□□ -2.06
USO1YDL058W ERP6P53198 216 aa2.18□□□□□ -2.06
USO1YDL058W HEF3P53978 1044 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W ERV25P54837 211 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W SPP1Q03012 353 aa2.18□□□□□ -2.06
USO1YDL058W HFD1Q04458 532 aa2.18□□□□□ -2.06
USO1YDL058W AIM32Q04689 311 aa2.18□□□□□ -2.06
USO1YDL058W SPC2Q04969 178 aa2.18□□□□□ -2.06
USO1YDL058W YMR226CQ05016 267 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W RSA3Q05942 220 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W ATG17Q06410 417 aa2.18□□□□□ -2.06
USO1YDL058W PMT7Q06644 662 aa2.18□□□□□ -2.06
USO1YDL058W OSW2Q12202 724 aa2.18□□□□□ -2.06
USO1YDL058W PDX1P16451 410 aa2.18□□□□□ -2.06
USO1YDL058W GUT2P32191 649 aa2.18□□□□□ -2.06
USO1YDL058W AFR1P33304 620 aa2.18□□□□□ -2.06
USO1YDL058W SPT10P35208 640 aa2.18□□□□□ -2.06
USO1YDL058W RSM22P36056 628 aa2.18□□□□□ -2.06
USO1YDL058W DAD2P36162 133 aa2.18□□□□□ -2.06
USO1YDL058W EDS1P38073 919 aa2.18□□□□□ -2.06
USO1YDL058W TOK1P40310 691 aa2.18□□□□□ -2.06
USO1YDL058W PHB1P40961 287 aa2.18□□□□□ -2.06
USO1YDL058W CIT3P43635 486 aa2.18□□□□□ -2.06
USO1YDL058W MNP1P53163 194 aaPredicted RBP2.18□□□□□ -2.06
USO1YDL058W HOL1P53389 586 aa2.18□□□□□ -2.06
USO1YDL058W RET3P53600 189 aa2.18□□□□□ -2.06
USO1YDL058W RCM1P53972 490 aa2.18□□□□□ -2.06
USO1YDL058W YNL011CP53980 444 aa2.18□□□□□ -2.06
USO1YDL058W CDC55Q00362 526 aa2.18□□□□□ -2.06
USO1YDL058W RPL6AQ02326 176 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W MRPS17Q03246 237 aaPredicted RBP2.18□□□□□ -2.06
USO1YDL058W PRM15Q03262 622 aa2.18□□□□□ -2.06
USO1YDL058W NDL1Q06568 189 aa2.18□□□□□ -2.06
USO1YDL058W RTC5Q12108 567 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W HER1Q12276 1246 aa2.18□□□□□ -2.06
USO1YDL058W SNT1P25357 1226 aa2.18□□□□□ -2.06
USO1YDL058W MCM5P29496 775 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W TFC1P32367 649 aa2.18□□□□□ -2.06
USO1YDL058W PET309P32522 965 aaPredicted RBP2.18□□□□□ -2.06
USO1YDL058W RRT14P40470 206 aa2.18□□□□□ -2.06
USO1YDL058W ULP2P40537 1034 aaPredicted RBP2.18□□□□□ -2.06
USO1YDL058W SIW14P53965 281 aa2.18□□□□□ -2.06
USO1YDL058W HAS1Q03532 505 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W NSE5Q03718 556 aa2.18□□□□□ -2.06
USO1YDL058W GPI17Q04080 534 aa2.18□□□□□ -2.06
USO1YDL058W RSC2Q06488 889 aa2.18□□□□□ -2.06
USO1YDL058W RAD34Q06665 692 aa2.18□□□□□ -2.06
USO1YDL058W YDL144CQ07589 356 aa2.18□□□□□ -2.06
USO1YDL058W IES3Q12345 250 aa2.18□□□□□ -2.06
USO1YDL058W AI4P03878 556 aa2.18□□□□□ -2.06
USO1YDL058W TUB1P09733 447 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W GCD2P12754 651 aaPredicted RBP2.18□□□□□ -2.06
USO1YDL058W CDC34P14682 295 aa2.18□□□□□ -2.06
USO1YDL058W RAD27P26793 382 aa2.18□□□□□ -2.06
USO1YDL058W NUF2P33895 451 aa2.18□□□□□ -2.06
USO1YDL058W LHS1P36016 881 aa2.18□□□□□ -2.06
USO1YDL058W UBP7P40453 1071 aa2.18□□□□□ -2.06
USO1YDL058W SLM1P40485 686 aa2.18□□□□□ -2.06
USO1YDL058W BFA1P47113 574 aa2.18□□□□□ -2.06
USO1YDL058W ATP25Q03153 612 aa2.18□□□□□ -2.06
USO1YDL058W TRS120Q04183 1289 aa2.18□□□□□ -2.06
USO1YDL058W SPO20Q04359 397 aa2.18□□□□□ -2.06
USO1YDL058W HRQ1Q05549 1077 aa2.18□□□□□ -2.06
USO1YDL058W YLR287CQ05881 355 aa2.18□□□□□ -2.06
USO1YDL058W SEC10Q06245 871 aa2.18□□□□□ -2.06
USO1YDL058W CET1O13297 549 aaPredicted RBP2.18□□□□□ -2.06
USO1YDL058W GCN4P03069 281 aa2.18□□□□□ -2.06
USO1YDL058W RAD1P06777 1100 aa2.18□□□□□ -2.06
USO1YDL058W PRE10P21242 288 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
USO1YDL058W CBP3P21560 335 aa2.18□□□□□ -2.06
USO1YDL058W MSM1P22438 575 aa2.18□□□□□ -2.06
USO1YDL058W CLB3P24870 427 aa2.18□□□□□ -2.06
USO1YDL058W APL2P36000 726 aaPredicted RBP2.18□□□□□ -2.06
USO1YDL058W RGD1P38339 666 aa2.18□□□□□ -2.06
USO1YDL058W KIC1P38692 1080 aa2.18□□□□□ -2.06
USO1YDL058W VPS29P38759 282 aa2.18□□□□□ -2.06
USO1YDL058W PRE6P40303 254 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W VID28P40547 921 aa2.18□□□□□ -2.06
USO1YDL058W YGR054WP53235 642 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W YNL050CP53952 270 aa2.18□□□□□ -2.06
USO1YDL058W CST9Q06032 482 aa2.18□□□□□ -2.06
USO1YDL058W YPL225WQ08971 146 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W LSP1Q12230 341 aaKnown RBP2.18□□□□□ -2.06
USO1YDL058W YLL054CQ12244 843 aa2.18□□□□□ -2.06
USO1YDL058W YBL111CQ3E7Y5 667 aa2.18□□□□□ -2.06
USO1YDL058W RPL24AP04449 155 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W SIR3P06701 978 aa2.17□□□□□ -2.06
USO1YDL058W PGI1P12709 554 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W RER1P25560 188 aa2.17□□□□□ -2.06
USO1YDL058W APM2P38700 605 aa2.17□□□□□ -2.06
USO1YDL058W YHR054CP38780 354 aa2.17□□□□□ -2.06
USO1YDL058W YJL206CP39529 758 aa2.17□□□□□ -2.06
USO1YDL058W RCY1P39531 840 aa2.17□□□□□ -2.06
USO1YDL058W VPS8P39702 1274 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms