RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	YKL151C	P36059	337 aa		4.58	□□□□□ -1.68
PBP4	YDL053C	RFC5	P38251	354 aa		4.58	□□□□□ -1.68
PBP4	YDL053C	PFD1	P46988	109 aa		4.58	□□□□□ -1.68
PBP4	YDL053C	YJL049W	P47048	450 aa		4.58	□□□□□ -1.68
PBP4	YDL053C	NNF1	P47149	201 aa		4.58	□□□□□ -1.68
PBP4	YDL053C	RIB2	Q12362	591 aa	Known RBP	4.58	□□□□□ -1.68
PBP4	YDL053C	RAD4	P14736	754 aa		4.57	□□□□□ -1.68
PBP4	YDL053C	RRT14	P40470	206 aa		4.57	□□□□□ -1.68
PBP4	YDL053C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
PBP4	YDL053C	DUS3	Q06053	668 aa	Known RBP	4.57	□□□□□ -1.68
PBP4	YDL053C	FMP25	Q08023	583 aa		4.57	□□□□□ -1.68
PBP4	YDL053C	CDC12	P32468	407 aa	Known RBP	4.56	□□□□□ -1.68
PBP4	YDL053C	AVT1	P47082	602 aa		4.56	□□□□□ -1.68
PBP4	YDL053C	HFM1	P51979	1187 aa		4.56	□□□□□ -1.68
PBP4	YDL053C	MTC3	P53077	123 aa		4.56	□□□□□ -1.68
PBP4	YDL053C	MRPL22	P53881	309 aa		4.56	□□□□□ -1.68
PBP4	YDL053C	RSM24	Q03976	319 aa		4.56	□□□□□ -1.68
PBP4	YDL053C	YDR306C	Q06640	478 aa		4.56	□□□□□ -1.68
PBP4	YDL053C	MDM38	Q08179	573 aa		4.56	□□□□□ -1.68
PBP4	YDL053C	PRP9	P19736	530 aa	Known RBP	4.55	□□□□□ -1.68
PBP4	YDL053C	GAS1	P22146	559 aa	Known RBP	4.55	□□□□□ -1.68
PBP4	YDL053C	APL1	P27351	700 aa		4.55	□□□□□ -1.68
PBP4	YDL053C	RPL8B	P29453	256 aa	Known RBP	4.55	□□□□□ -1.68
PBP4	YDL053C	TSA1	P34760	196 aa	Known RBP	4.55	□□□□□ -1.68
PBP4	YDL053C	SAH1	P39954	449 aa	Known RBP	4.55	□□□□□ -1.68
PBP4	YDL053C	TIM54	P47045	478 aa		4.55	□□□□□ -1.68
PBP4	YDL053C	SNO2	P53823	222 aa		4.55	□□□□□ -1.68
PBP4	YDL053C	YLL058W	Q12198	575 aa		4.55	□□□□□ -1.68
PBP4	YDL053C	CYC1	P00044	109 aa	Predicted RBP	4.54	□□□□□ -1.68
PBP4	YDL053C	KIN2	P13186	1147 aa	Known RBP	4.54	□□□□□ -1.68
PBP4	YDL053C	CMP2	P14747	604 aa		4.54	□□□□□ -1.68
PBP4	YDL053C	OCA5	P38738	679 aa		4.54	□□□□□ -1.68
PBP4	YDL053C	GIC1	P38785	314 aa		4.54	□□□□□ -1.68
PBP4	YDL053C	ALR2	P43553	858 aa		4.54	□□□□□ -1.68
PBP4	YDL053C	SRP1	Q02821	542 aa	Known RBP	4.54	□□□□□ -1.68
PBP4	YDL053C	SIZ1	Q04195	904 aa		4.54	□□□□□ -1.68
PBP4	YDL053C	CDA2	Q06703	312 aa		4.54	□□□□□ -1.68
PBP4	YDL053C	SPO75	Q07798	868 aa		4.54	□□□□□ -1.68
PBP4	YDL053C	XYL2	Q07993	356 aa		4.54	□□□□□ -1.68
PBP4	YDL053C	GAL10	P04397	699 aa		4.53	□□□□□ -1.68
PBP4	YDL053C	SRM1	P21827	482 aa		4.53	□□□□□ -1.68
PBP4	YDL053C	RNQ1	P25367	405 aa		4.53	□□□□□ -1.68
PBP4	YDL053C	PPH3	P32345	308 aa		4.53	□□□□□ -1.68
PBP4	YDL053C	AAR2	P32357	355 aa	Predicted RBP	4.53	□□□□□ -1.68
PBP4	YDL053C	HBS1	P32769	611 aa	Known RBP	4.53	□□□□□ -1.68
PBP4	YDL053C	ELM1	P32801	640 aa		4.53	□□□□□ -1.68
PBP4	YDL053C	IOC3	P43596	787 aa		4.53	□□□□□ -1.68
PBP4	YDL053C	HUL5	P53119	910 aa		4.53	□□□□□ -1.68
PBP4	YDL053C	PRP43	P53131	767 aa	Known RBP	4.53	□□□□□ -1.68
PBP4	YDL053C	ERP6	P53198	216 aa		4.53	□□□□□ -1.68
PBP4	YDL053C	UTP8	P53276	713 aa	Known RBP	4.53	□□□□□ -1.68
PBP4	YDL053C	TPO2	P53283	614 aa		4.53	□□□□□ -1.68
PBP4	YDL053C	SRT1	Q03175	343 aa		4.53	□□□□□ -1.68
PBP4	YDL053C	MSC2	Q03455	724 aa		4.53	□□□□□ -1.68
PBP4	YDL053C	NSE3	Q05541	303 aa		4.53	□□□□□ -1.68
PBP4	YDL053C	UBX5	Q06682	500 aa		4.53	□□□□□ -1.68
PBP4	YDL053C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
PBP4	YDL053C	OSW2	Q12202	724 aa		4.53	□□□□□ -1.68
PBP4	YDL053C	YOL098C	Q12496	1037 aa		4.53	□□□□□ -1.68
PBP4	YDL053C	ARE1	P25628	610 aa		4.52	□□□□□ -1.69
PBP4	YDL053C	FUN30	P31380	1131 aa		4.52	□□□□□ -1.69
PBP4	YDL053C	YHR020W	P38708	688 aa	Known RBP	4.52	□□□□□ -1.69
PBP4	YDL053C	NPP2	P39997	493 aa		4.52	□□□□□ -1.69
PBP4	YDL053C	NIT1	P40447	199 aa		4.52	□□□□□ -1.69
PBP4	YDL053C	SGD1	Q06132	899 aa		4.52	□□□□□ -1.69
PBP4	YDL053C	EAF1	Q06337	982 aa		4.52	□□□□□ -1.69
PBP4	YDL053C	BDF2	Q07442	638 aa		4.52	□□□□□ -1.69
PBP4	YDL053C	YOR352W	Q08816	343 aa		4.52	□□□□□ -1.69
PBP4	YDL053C	OSH2	Q12451	1283 aa		4.52	□□□□□ -1.69
PBP4	YDL053C	NPP1	P25353	742 aa		4.51	□□□□□ -1.69
PBP4	YDL053C	AFR1	P33304	620 aa		4.51	□□□□□ -1.69
PBP4	YDL053C	YAP1801	P38856	637 aa		4.51	□□□□□ -1.69
PBP4	YDL053C	CCC2	P38995	1004 aa		4.51	□□□□□ -1.69
PBP4	YDL053C	SIT1	P39980	628 aa		4.51	□□□□□ -1.69
PBP4	YDL053C	YGR125W	P53273	1036 aa		4.51	□□□□□ -1.69
PBP4	YDL053C	PLB2	Q03674	706 aa		4.51	□□□□□ -1.69
PBP4	YDL053C	ROT1	Q03691	256 aa		4.51	□□□□□ -1.69
PBP4	YDL053C	CDC53	Q12018	815 aa	Known RBP	4.51	□□□□□ -1.69
PBP4	YDL053C	CIT1	P00890	479 aa		4.5	□□□□□ -1.69
PBP4	YDL053C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
PBP4	YDL053C	HSP60	P19882	572 aa	Known RBP	4.5	□□□□□ -1.69
PBP4	YDL053C	YRO2	P38079	344 aa		4.5	□□□□□ -1.69
PBP4	YDL053C	AIM3	P38266	947 aa	Known RBP	4.5	□□□□□ -1.69
PBP4	YDL053C	LAM1	P38851	1228 aa		4.5	□□□□□ -1.69
PBP4	YDL053C	GYP7	P48365	746 aa		4.5	□□□□□ -1.69
PBP4	YDL053C	SFB2	P53953	876 aa		4.5	□□□□□ -1.69
PBP4	YDL053C	ADE8	P04161	214 aa		4.49	□□□□□ -1.69
PBP4	YDL053C	RPS13	P05756	151 aa	Known RBP	4.49	□□□□□ -1.69
PBP4	YDL053C	ERT1	P38140	529 aa		4.49	□□□□□ -1.69
PBP4	YDL053C	YBR284W	P38150	797 aa		4.49	□□□□□ -1.69
PBP4	YDL053C	ECM21	P38167	1117 aa	Known RBP	4.49	□□□□□ -1.69
PBP4	YDL053C	TSL1	P38427	1098 aa	Known RBP	4.49	□□□□□ -1.69
PBP4	YDL053C	MEF2	P39677	819 aa		4.49	□□□□□ -1.69
PBP4	YDL053C	YER158C	P40095	573 aa		4.49	□□□□□ -1.69
PBP4	YDL053C	BUL2	Q03758	920 aa	Known RBP	4.49	□□□□□ -1.69
PBP4	YDL053C	YDR132C	Q03900	495 aa		4.49	□□□□□ -1.69
PBP4	YDL053C	FLC1	Q08967	793 aa		4.49	□□□□□ -1.69
PBP4	YDL053C	YPL277C	Q08989	487 aa		4.49	□□□□□ -1.69
PBP4	YDL053C	HBN1	Q96VH4	193 aa		4.49	□□□□□ -1.69
PBP4	YDL053C	PRP6	P19735	899 aa	Predicted RBP	4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 123.9 ms