RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL020W	YCL020W	MTC3	P53077	123 aa		4.89	□□□□□ -1.63
YCL020W	YCL020W	SHE9	Q04172	456 aa		4.89	□□□□□ -1.63
YCL020W	YCL020W	DUS3	Q06053	668 aa	Known RBP	4.89	□□□□□ -1.63
YCL020W	YCL020W	APL1	P27351	700 aa		4.88	□□□□□ -1.63
YCL020W	YCL020W	RFC5	P38251	354 aa		4.88	□□□□□ -1.63
YCL020W	YCL020W	GEM1	P39722	662 aa		4.88	□□□□□ -1.63
YCL020W	YCL020W	SAH1	P39954	449 aa	Known RBP	4.88	□□□□□ -1.63
YCL020W	YCL020W	PFD1	P46988	109 aa		4.88	□□□□□ -1.63
YCL020W	YCL020W	MRPL22	P53881	309 aa		4.88	□□□□□ -1.63
YCL020W	YCL020W	ROT1	Q03691	256 aa		4.88	□□□□□ -1.63
YCL020W	YCL020W	YDR306C	Q06640	478 aa		4.88	□□□□□ -1.63
YCL020W	YCL020W	UBX5	Q06682	500 aa		4.88	□□□□□ -1.63
YCL020W	YCL020W	GAL10	P04397	699 aa		4.87	□□□□□ -1.63
YCL020W	YCL020W	ACE2	P21192	770 aa		4.87	□□□□□ -1.63
YCL020W	YCL020W	PLB2	Q03674	706 aa		4.87	□□□□□ -1.63
YCL020W	YCL020W	CDA2	Q06703	312 aa		4.87	□□□□□ -1.63
YCL020W	YCL020W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
YCL020W	YCL020W	TSA1	P34760	196 aa	Known RBP	4.86	□□□□□ -1.63
YCL020W	YCL020W	AIM3	P38266	947 aa	Known RBP	4.86	□□□□□ -1.63
YCL020W	YCL020W	IRC24	P40580	263 aa		4.86	□□□□□ -1.63
YCL020W	YCL020W	TIM54	P47045	478 aa		4.86	□□□□□ -1.63
YCL020W	YCL020W	ECL1	P48235	211 aa		4.86	□□□□□ -1.63
YCL020W	YCL020W	FMP25	Q08023	583 aa		4.86	□□□□□ -1.63
YCL020W	YCL020W	NPP1	P25353	742 aa		4.85	□□□□□ -1.63
YCL020W	YCL020W	RPL8B	P29453	256 aa	Known RBP	4.85	□□□□□ -1.63
YCL020W	YCL020W	MRP8	P35719	219 aa		4.85	□□□□□ -1.63
YCL020W	YCL020W	YBR284W	P38150	797 aa		4.85	□□□□□ -1.63
YCL020W	YCL020W	GIC1	P38785	314 aa		4.85	□□□□□ -1.63
YCL020W	YCL020W	IRR1	P40541	1150 aa		4.85	□□□□□ -1.63
YCL020W	YCL020W	ALR2	P43553	858 aa		4.85	□□□□□ -1.63
YCL020W	YCL020W	IOC3	P43596	787 aa		4.85	□□□□□ -1.63
YCL020W	YCL020W	GTF1	P53260	183 aa	Predicted RBP	4.85	□□□□□ -1.63
YCL020W	YCL020W	SFB2	P53953	876 aa		4.85	□□□□□ -1.63
YCL020W	YCL020W	NAN1	Q02931	896 aa	Known RBP	4.85	□□□□□ -1.63
YCL020W	YCL020W	MDM38	Q08179	573 aa		4.85	□□□□□ -1.63
YCL020W	YCL020W	CDC12	P32468	407 aa	Known RBP	4.84	□□□□□ -1.63
YCL020W	YCL020W	PBY1	P38254	753 aa		4.84	□□□□□ -1.63
YCL020W	YCL020W	GCV2	P49095	1034 aa		4.84	□□□□□ -1.63
YCL020W	YCL020W	HUL5	P53119	910 aa		4.84	□□□□□ -1.63
YCL020W	YCL020W	RSM24	Q03976	319 aa		4.84	□□□□□ -1.63
YCL020W	YCL020W	PPH3	P32345	308 aa		4.83	□□□□□ -1.64
YCL020W	YCL020W	AAR2	P32357	355 aa	Predicted RBP	4.83	□□□□□ -1.64
YCL020W	YCL020W	HBS1	P32769	611 aa	Known RBP	4.83	□□□□□ -1.64
YCL020W	YCL020W	AFR1	P33304	620 aa		4.83	□□□□□ -1.64
YCL020W	YCL020W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
YCL020W	YCL020W	ATG13	Q06628	738 aa		4.83	□□□□□ -1.64
YCL020W	YCL020W	EAF1	Q06337	982 aa		4.82	□□□□□ -1.64
YCL020W	YCL020W	TOP3	P13099	656 aa		4.81	□□□□□ -1.64
YCL020W	YCL020W	ARE1	P25628	610 aa		4.81	□□□□□ -1.64
YCL020W	YCL020W	YRO2	P38079	344 aa		4.81	□□□□□ -1.64
YCL020W	YCL020W	YHR020W	P38708	688 aa	Known RBP	4.81	□□□□□ -1.64
YCL020W	YCL020W	CCC2	P38995	1004 aa		4.81	□□□□□ -1.64
YCL020W	YCL020W	KRI1	P42846	591 aa	Known RBP	4.81	□□□□□ -1.64
YCL020W	YCL020W	YGR125W	P53273	1036 aa		4.81	□□□□□ -1.64
YCL020W	YCL020W	SNO2	P53823	222 aa		4.81	□□□□□ -1.64
YCL020W	YCL020W	SRT1	Q03175	343 aa		4.81	□□□□□ -1.64
YCL020W	YCL020W	SGD1	Q06132	899 aa		4.81	□□□□□ -1.64
YCL020W	YCL020W	BDF2	Q07442	638 aa		4.81	□□□□□ -1.64
YCL020W	YCL020W	YPL277C	Q08989	487 aa		4.81	□□□□□ -1.64
YCL020W	YCL020W	YPR071W	Q12346	211 aa		4.81	□□□□□ -1.64
YCL020W	YCL020W	KIN2	P13186	1147 aa	Known RBP	4.8	□□□□□ -1.64
YCL020W	YCL020W	ENA1	P13587	1091 aa		4.8	□□□□□ -1.64
YCL020W	YCL020W	SRP101	P32916	621 aa		4.8	□□□□□ -1.64
YCL020W	YCL020W	LAM1	P38851	1228 aa		4.8	□□□□□ -1.64
YCL020W	YCL020W	YAP1801	P38856	637 aa		4.8	□□□□□ -1.64
YCL020W	YCL020W	SNF7	P39929	240 aa	Known RBP	4.8	□□□□□ -1.64
YCL020W	YCL020W	RRT14	P40470	206 aa		4.8	□□□□□ -1.64
YCL020W	YCL020W	NNF1	P47149	201 aa		4.8	□□□□□ -1.64
YCL020W	YCL020W	ENA2	Q01896	1091 aa		4.8	□□□□□ -1.64
YCL020W	YCL020W	MSC2	Q03455	724 aa		4.8	□□□□□ -1.64
YCL020W	YCL020W	CDC53	Q12018	815 aa	Known RBP	4.8	□□□□□ -1.64
YCL020W	YCL020W	OSW2	Q12202	724 aa		4.8	□□□□□ -1.64
YCL020W	YCL020W	ENA5	Q12691	1091 aa		4.8	□□□□□ -1.64
YCL020W	YCL020W	THS1	P04801	734 aa	Known RBP	4.79	□□□□□ -1.64
YCL020W	YCL020W	ELM1	P32801	640 aa		4.79	□□□□□ -1.64
YCL020W	YCL020W	TOD6	P34219	525 aa		4.79	□□□□□ -1.64
YCL020W	YCL020W	TSL1	P38427	1098 aa	Known RBP	4.79	□□□□□ -1.64
YCL020W	YCL020W	MEF2	P39677	819 aa		4.79	□□□□□ -1.64
YCL020W	YCL020W	PRP43	P53131	767 aa	Known RBP	4.79	□□□□□ -1.64
YCL020W	YCL020W	SRP1	Q02821	542 aa	Known RBP	4.79	□□□□□ -1.64
YCL020W	YCL020W	FLC1	Q08967	793 aa		4.79	□□□□□ -1.64
YCL020W	YCL020W	YOL098C	Q12496	1037 aa		4.79	□□□□□ -1.64
YCL020W	YCL020W	RPS13	P05756	151 aa	Known RBP	4.78	□□□□□ -1.64
YCL020W	YCL020W	THI80	P35202	319 aa		4.78	□□□□□ -1.64
YCL020W	YCL020W	OCA5	P38738	679 aa		4.78	□□□□□ -1.64
YCL020W	YCL020W	SPT20	P50875	604 aa		4.78	□□□□□ -1.64
YCL020W	YCL020W	YDR132C	Q03900	495 aa		4.78	□□□□□ -1.64
YCL020W	YCL020W	SIZ1	Q04195	904 aa		4.78	□□□□□ -1.64
YCL020W	YCL020W	NSE3	Q05541	303 aa		4.78	□□□□□ -1.64
YCL020W	YCL020W	YOR352W	Q08816	343 aa		4.78	□□□□□ -1.64
YCL020W	YCL020W	OSH2	Q12451	1283 aa		4.78	□□□□□ -1.64
YCL020W	YCL020W	HBN1	Q96VH4	193 aa		4.78	□□□□□ -1.64
YCL020W	YCL020W	CIT1	P00890	479 aa		4.77	□□□□□ -1.65
YCL020W	YCL020W	MSD1	P15179	658 aa	Known RBP	4.77	□□□□□ -1.65
YCL020W	YCL020W	PRP9	P19736	530 aa	Known RBP	4.77	□□□□□ -1.65
YCL020W	YCL020W	HSP60	P19882	572 aa	Known RBP	4.77	□□□□□ -1.65
YCL020W	YCL020W	BET3	P36149	193 aa		4.77	□□□□□ -1.65
YCL020W	YCL020W	ECM21	P38167	1117 aa	Known RBP	4.77	□□□□□ -1.65
YCL020W	YCL020W	RSP5	P39940	809 aa	Known RBP	4.77	□□□□□ -1.65
YCL020W	YCL020W	ZRG8	P40021	1076 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms