RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 Pim2Q62070 370 aa30,59■■■□□ 2,49
Pcf11-205ENSMUST00000208255 Phf23Q8BSN5 401 aa30,58■■■□□ 2,49
Pcf11-205ENSMUST00000208255 Cyp2d11P24457 504 aa30,57■■■□□ 2,48
Pcf11-205ENSMUST00000208255 Disp3A3KFU9 1347 aa30,57■■■□□ 2,48
Pcf11-205ENSMUST00000208255 Erbb4Q61527 1308 aa30,57■■■□□ 2,48
Pcf11-205ENSMUST00000208255 Syde2E9PUP1 1314 aa30,56■■■□□ 2,48
Pcf11-205ENSMUST00000208255 Miga2Q8BK03 593 aa30,54■■■□□ 2,48
Pcf11-205ENSMUST00000208255 Rlbp1Q9Z275 317 aa30,54■■■□□ 2,48
Pcf11-205ENSMUST00000208255 Smarcc1P97496 1104 aa30,53■■■□□ 2,48
Pcf11-205ENSMUST00000208255 MetP16056 1379 aa30,53■■■□□ 2,48
Pcf11-205ENSMUST00000208255 Ppp4r2Q0VGB7 417 aa30,53■■■□□ 2,48
Pcf11-205ENSMUST00000208255 Slc39a6Q8C145 765 aa30,53■■■□□ 2,48
Pcf11-205ENSMUST00000208255 CoblQ5NBX1 1337 aaKnown RBP30,52■■■□□ 2,48
Pcf11-205ENSMUST00000208255 Gm38655A0A286YDK6 273 aa30,52■■■□□ 2,48
Pcf11-205ENSMUST00000208255 Clcn1Q64347 994 aa30,52■■■□□ 2,48
Pcf11-205ENSMUST00000208255 Aldh1l2Q8K009 923 aa30,52■■■□□ 2,48
Pcf11-205ENSMUST00000208255 Apba2P98084 750 aa30,51■■■□□ 2,47
Pcf11-205ENSMUST00000208255 Nip7Q9CXK8 180 aaKnown RBP30,5■■■□□ 2,47
Pcf11-205ENSMUST00000208255 Trim52Q8CDV4 233 aa30,5■■■□□ 2,47
Pcf11-205ENSMUST00000208255 Chmp4bQ9D8B3 224 aaKnown RBP30,5■■■□□ 2,47
Pcf11-205ENSMUST00000208255 Echdc1Q9D9V3 322 aa30,5■■■□□ 2,47
Pcf11-205ENSMUST00000208255 Gigyf1Q99MR1 1044 aaKnown RBP30,49■■■□□ 2,47
Pcf11-205ENSMUST00000208255 Flt4P35917 1363 aa30,49■■■□□ 2,47
Pcf11-205ENSMUST00000208255 Gm13023A2A8N2 498 aa30,46■■■□□ 2,47
Pcf11-205ENSMUST00000208255 Zbtb1Q91VL9 713 aa30,46■■■□□ 2,47
Pcf11-205ENSMUST00000208255 Prr29B1ARI9 187 aa30,44■■■□□ 2,46
Pcf11-205ENSMUST00000208255 Slc4a3P16283 1227 aa30,44■■■□□ 2,46
Pcf11-205ENSMUST00000208255 Irf9Q61179 399 aa30,44■■■□□ 2,46
Pcf11-205ENSMUST00000208255 Ankle2Q6P1H6 964 aa30,44■■■□□ 2,46
Pcf11-205ENSMUST00000208255 Smc5Q8CG46 1101 aaKnown RBP30,44■■■□□ 2,46
Pcf11-205ENSMUST00000208255 Col4a1P02463 1669 aa30,44■■■□□ 2,46
Pcf11-205ENSMUST00000208255 Supt16hQ920B9 1047 aa30,43■■■□□ 2,46
Pcf11-205ENSMUST00000208255 Igfbp6P47880 238 aa30,42■■■□□ 2,46
Pcf11-205ENSMUST00000208255 Ttll7A4Q9F0 912 aa30,41■■■□□ 2,46
Pcf11-205ENSMUST00000208255 Lrrc43Q3V0L5 667 aa30,41■■■□□ 2,46
Pcf11-205ENSMUST00000208255 Rapgef4Q9EQZ6 1011 aa30,4■■■□□ 2,46
Pcf11-205ENSMUST00000208255 Gnl3lQ6PGG6 577 aaKnown RBP30,39■■■□□ 2,46
Pcf11-205ENSMUST00000208255 Bend3Q6PAL0 825 aa30,36■■■□□ 2,45
Pcf11-205ENSMUST00000208255 Hs1bp3Q3TC93 395 aa30,35■■■□□ 2,45
Pcf11-205ENSMUST00000208255 C4bP01029 1738 aa30,35■■■□□ 2,45
Pcf11-205ENSMUST00000208255 Tm6sf1P58749 370 aa30,34■■■□□ 2,45
Pcf11-205ENSMUST00000208255 Map3k2Q61083 619 aa30,34■■■□□ 2,45
Pcf11-205ENSMUST00000208255 Prr5lA2AVJ5 370 aa30,33■■■□□ 2,45
Pcf11-205ENSMUST00000208255 AU019823E9PUQ3 292 aa30,33■■■□□ 2,45
Pcf11-205ENSMUST00000208255 Bicc1Q99MQ1 977 aaKnown RBP30,33■■■□□ 2,45
Pcf11-205ENSMUST00000208255 Prkar2bP31324 416 aa30,33■■■□□ 2,45
Pcf11-205ENSMUST00000208255 RtcbQ99LF4 505 aaKnown RBP30,32■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Ddx60E9PZQ1 1711 aa30,32■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Zbtb40Q6PCS8 1258 aa30,31■■■□□ 2,44
Pcf11-205ENSMUST00000208255 OscarQ8VBT3 265 aa30,31■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Sipa1l3G3X9J0 1776 aa30,31■■■□□ 2,44
Pcf11-205ENSMUST00000208255 MeiocA2AG06 965 aa30,3■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Exoc6bA6H5Z3 810 aa30,3■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Fam198bQ3UPI1 517 aa30,3■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Nolc1E9Q5C9 702 aaKnown RBP30,3■■■□□ 2,44
Pcf11-205ENSMUST00000208255 HellsQ60848 821 aa30,3■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Stk36Q69ZM6 1316 aa30,29■■■□□ 2,44
Pcf11-205ENSMUST00000208255 NppbP40753 121 aa30,29■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Slfnl1Q8BHW9 410 aa30,29■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Ppm1mQ8BU27 406 aa30,29■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Nlrp3Q8R4B8 1033 aa30,29■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Zfyve9A2A8R0 1397 aa30,29■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Cluap1Q8R3P7 413 aa30,28■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Fgd1P52734 960 aa30,27■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Esco1Q69Z69 843 aa30,27■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Zap70P43404 618 aa30,27■■■□□ 2,44
Pcf11-205ENSMUST00000208255 HmcesQ8R1M0 353 aaKnown RBP30,27■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Armcx1Q9CX83 456 aa30,27■■■□□ 2,44
Pcf11-205ENSMUST00000208255 Triml2E9PW10 424 aa30,26■■■□□ 2,43
Pcf11-205ENSMUST00000208255 1700123L14RikQ3V2K7 440 aa30,26■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Atl3Q91YH5 541 aa30,26■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Nsfl1cQ9CZ44 370 aaKnown RBP30,26■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Chmp5Q9D7S9 219 aa30,26■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Dpf1Q9QX66 387 aa30,26■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Anp32aO35381 247 aa30,25■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Mphosph10Q810V0 681 aaKnown RBP30,25■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Hspa2P17156 633 aa30,25■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Ddx58Q6Q899 926 aa30,25■■■□□ 2,43
Pcf11-205ENSMUST00000208255 MypnQ5DTJ9 1315 aa30,24■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Gnai2P08752 355 aaKnown RBP30,24■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Slf2Q6P9P0 1278 aa30,24■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Trip6Q9Z1Y4 480 aa30,24■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Strn4P58404 760 aa30,23■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Atp1b3P97370 278 aa30,23■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Ank1Q02357 1862 aa30,23■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Trim27Q62158 513 aa30,22■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Spata31d1bE9QA57 1361 aa30,22■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Jdp2P97875 163 aa30,21■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Kif23E9Q5G3 953 aa30,2■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Wwc1Q5SXA9 1104 aa30,2■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Fam13aQ8BGI4 693 aa30,2■■■□□ 2,43
Pcf11-205ENSMUST00000208255 Cfdp1O88271 295 aaKnown RBP30,19■■■□□ 2,42
Pcf11-205ENSMUST00000208255 Ezh2Q61188 746 aaKnown RBP30,19■■■□□ 2,42
Pcf11-205ENSMUST00000208255 Amhr2Q8K592 568 aa30,19■■■□□ 2,42
Pcf11-205ENSMUST00000208255 HnrnpuQ8VEK3 800 aaKnown RBP30,19■■■□□ 2,42
Pcf11-205ENSMUST00000208255 Akt1s1Q9D1F4 257 aa30,19■■■□□ 2,42
Pcf11-205ENSMUST00000208255 EspnQ9ET47 871 aa30,19■■■□□ 2,42
Pcf11-205ENSMUST00000208255 Lama4P97927 1816 aa30,19■■■□□ 2,42
Pcf11-205ENSMUST00000208255 AbraQ8BUZ1 375 aa30,19■■■□□ 2,42
Pcf11-205ENSMUST00000208255 Ssc5dQ8BV57 1371 aa30,18■■■□□ 2,42
Retrieved 100 of 22,080 RNA–protein pairs in 33,9 ms