RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Wdr63B2RY71 923 aa16.12■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Zscan29E9Q5B4 869 aa16.12■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Ppp1r15aP17564 657 aa16.12■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Fez2Q6TYB5 348 aa16.12■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Bloc1s2Q9CWG9 143 aa16.12■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Il16O54824 1322 aa16.12■□□□□ 0.17
Col3a1-201ENSMUST00000087883 LyarQ08288 388 aaKnown RBP16.12■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Lman1Q9D0F3 517 aa16.12■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Baiap2l1Q9DBJ3 514 aa16.12■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Ano2Q8CFW1 1002 aa16.12■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Ktn1Q61595 1327 aaKnown RBP16.12■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Tmx1Q8VBT0 278 aa16.12■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Ddx46Q569Z5 1032 aaKnown RBP16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Zbtb21E9Q444 1094 aa16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Igf2bp2Q5SF07 592 aaKnown RBP16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Acbd3Q8BMP6 525 aa16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 KdrP35918 1367 aa16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Cfap73J3QPZ5 306 aa16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Akap2O54931 893 aa16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Mrpl44Q9CY73 333 aaKnown RBP16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Frmpd1A2AKB4 1549 aa16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Cnga2Q62398 664 aa16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Nop53Q8BK35 484 aaKnown RBP16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Ddx54Q8K4L0 874 aaKnown RBP16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Sil1Q9EPK6 465 aa16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Il1rapl2Q9ERS6 686 aa16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Asxl1P59598 1514 aa16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Tbc1d7Q9D0K0 293 aa16.11■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Hdhd2Q3UGR5 259 aa16.1■□□□□ 0.17
Col3a1-201ENSMUST00000087883 SfswapQ3USH5 945 aaKnown RBP16.1■□□□□ 0.17
Col3a1-201ENSMUST00000087883 StambpQ9CQ26 424 aa16.1■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Tex19.1Q99MV2 351 aa16.1■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Pik3r4Q8VD65 1358 aa16.1■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Pde4bB1AWC9 736 aa16.1■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Gjc1P28229 396 aa16.1■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Nf2P46662 596 aa16.1■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Mtmr3Q8K296 1196 aa16.1■□□□□ 0.17
Col3a1-201ENSMUST00000087883 PtprkP35822 1457 aa16.1■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Ddx10Q80Y44 875 aaKnown RBP16.1■□□□□ 0.17
Col3a1-201ENSMUST00000087883 EappQ5BU09 281 aa16.09■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Sh3d21Q7TSG5 549 aa16.09■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Ampd3O08739 766 aa16.09■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Q9D5Q8 446 aa16.09■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Mroh2bQ7M6Y6 1581 aa16.09■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Cacna2d4Q5RJF7 1116 aa16.09■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Calml4Q91WQ9 153 aa16.08■□□□□ 0.17
Col3a1-201ENSMUST00000087883 NgdnQ9DB96 315 aaKnown RBP16.08■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Ppfia3P60469 1194 aa16.08■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Ppfibp2O35711 882 aa16.08■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Gm7298A0A0N4SVU1 1476 aa16.08■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Rai14Q9EP71 979 aaKnown RBP16.08■□□□□ 0.16
Col3a1-201ENSMUST00000087883 DonsonQ9QXP4 560 aa16.08■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Tiam1Q60610 1591 aa16.08■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Ano10Q8BH79 659 aa16.08■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Hook3Q8BUK6 718 aa16.08■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Atf7Q8R0S1 413 aa16.08■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Nlrp3Q8R4B8 1033 aa16.08■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Dapk3O54784 448 aa16.07■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Liat1Q810M6 228 aa16.07■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Brd3Q8K2F0 726 aaKnown RBP16.07■□□□□ 0.16
Col3a1-201ENSMUST00000087883 HnrnpmQ9D0E1 729 aaKnown RBP16.07■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Snx13Q6PHS6 957 aa16.07■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Syt10Q9R0N4 523 aa16.07■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Ppfibp1Q8C8U0 969 aaKnown RBP16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 LlphQ9D945 130 aaKnown RBP16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Bicdl1A0JNT9 577 aa16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Api5O35841 504 aaKnown RBP16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Trap1aP19473 224 aa16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Srgap1Q91Z69 1062 aa16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Hsf2bpQ9D4G2 338 aa16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Kank1E9Q238 1360 aa16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 MycnP03966 462 aaKnown RBP16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Fam76aQ922G2 307 aa16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Chd1lQ9CXF7 900 aa16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Zfp42P22227 288 aa16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Stat1P42225 749 aa16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Aplp1Q03157 653 aa16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Traf3ip1Q149C2 625 aa16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Slc52a2Q9D8F3 450 aa16.06■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Ankrd40Q5SUE8 363 aa16.05■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Fam50bQ9WTJ8 334 aa16.05■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Clul1Q3ZRW6 464 aa16.05■□□□□ 0.16
Col3a1-201ENSMUST00000087883 ApobrQ8VBT6 942 aa16.05■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Olr1Q9EQ09 363 aa16.05■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Shtn1Q8K2Q9 631 aa16.05■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Ccdc94Q9D6J3 314 aa16.05■□□□□ 0.16
Col3a1-201ENSMUST00000087883 NmiO35309 314 aa16.05■□□□□ 0.16
Col3a1-201ENSMUST00000087883 GmnnO88513 206 aa16.05■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Kif2aP28740 705 aa16.05■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Cfap157Q0VFX2 523 aa16.05■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Tbc1d2bQ3U0J8 965 aa16.05■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Cdca7Q9D0M2 382 aa16.05■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Ankrd44B2RXR6 993 aa16.05■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Ripply1Q2WG77 201 aa16.04■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Rnf41Q8BH75 317 aa16.04■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Znf287Q9EQB9 759 aa16.04■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Afap1Q80YS6 731 aa16.04■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Eif3bQ8JZQ9 803 aaKnown RBP16.04■□□□□ 0.16
Col3a1-201ENSMUST00000087883 PogzQ8BZH4 1409 aaKnown RBP16.04■□□□□ 0.16
Col3a1-201ENSMUST00000087883 Ctnna2Q61301 953 aa16.04■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 103.1 ms