RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Dnajc10Q9DC23 793 aa16.91■□□□□ 0.3
Lime1-201ENSMUST00000048077 Tceal9Q9DD24 104 aa16.91■□□□□ 0.3
Lime1-201ENSMUST00000048077 Flt4P35917 1363 aa16.91■□□□□ 0.3
Lime1-201ENSMUST00000048077 TnrQ8BYI9 1358 aa16.91■□□□□ 0.3
Lime1-201ENSMUST00000048077 Wnk3Q80XP9 1757 aa16.9■□□□□ 0.3
Lime1-201ENSMUST00000048077 Mum1Q6DID5 682 aa16.9■□□□□ 0.3
Lime1-201ENSMUST00000048077 Gtf2a1Q99PM3 378 aa16.9■□□□□ 0.3
Lime1-201ENSMUST00000048077 Utp18Q5SSI6 552 aaKnown RBP16.89■□□□□ 0.3
Lime1-201ENSMUST00000048077 HellsQ60848 821 aa16.89■□□□□ 0.3
Lime1-201ENSMUST00000048077 Amer1Q7TS75 1132 aa16.89■□□□□ 0.3
Lime1-201ENSMUST00000048077 Pmfbp1Q9WVQ0 1022 aa16.89■□□□□ 0.3
Lime1-201ENSMUST00000048077 Rad50P70388 1312 aa16.89■□□□□ 0.29
Lime1-201ENSMUST00000048077 Zap70P43404 618 aa16.89■□□□□ 0.29
Lime1-201ENSMUST00000048077 CalcaP70160 136 aa16.89■□□□□ 0.29
Lime1-201ENSMUST00000048077 Arhgef1Q61210 920 aaKnown RBP16.89■□□□□ 0.29
Lime1-201ENSMUST00000048077 Gdpd2Q9ESM6 539 aa16.88■□□□□ 0.29
Lime1-201ENSMUST00000048077 Trim44Q9QXA7 346 aa16.88■□□□□ 0.29
Lime1-201ENSMUST00000048077 Abcc4E9Q236 1325 aa16.88■□□□□ 0.29
Lime1-201ENSMUST00000048077 EvcP57680 1005 aa16.88■□□□□ 0.29
Lime1-201ENSMUST00000048077 Morc2aQ69ZX6 1030 aa16.88■□□□□ 0.29
Lime1-201ENSMUST00000048077 Ints3Q7TPD0 1041 aaKnown RBP16.88■□□□□ 0.29
Lime1-201ENSMUST00000048077 SlkO54988 1233 aa16.87■□□□□ 0.29
Lime1-201ENSMUST00000048077 Cfdp1O88271 295 aaKnown RBP16.87■□□□□ 0.29
Lime1-201ENSMUST00000048077 GckrQ91X44 587 aa16.86■□□□□ 0.29
Lime1-201ENSMUST00000048077 Exoc6bA6H5Z3 810 aa16.86■□□□□ 0.29
Lime1-201ENSMUST00000048077 Phactr2B1AVP0 632 aa16.86■□□□□ 0.29
Lime1-201ENSMUST00000048077 Tlr7P58681 1050 aa16.86■□□□□ 0.29
Lime1-201ENSMUST00000048077 Pdzrn3Q69ZS0 1063 aa16.86■□□□□ 0.29
Lime1-201ENSMUST00000048077 Mphosph10Q810V0 681 aaKnown RBP16.86■□□□□ 0.29
Lime1-201ENSMUST00000048077 Nol11Q8BJW5 723 aaKnown RBP16.86■□□□□ 0.29
Lime1-201ENSMUST00000048077 4931400O07RikQ9D4M5 137 aa16.86■□□□□ 0.29
Lime1-201ENSMUST00000048077 Nrxn3Q6P9K9 1571 aa16.85■□□□□ 0.29
Lime1-201ENSMUST00000048077 Fkbp4P30416 458 aa16.85■□□□□ 0.29
Lime1-201ENSMUST00000048077 VgfQ0VGU4 617 aa16.85■□□□□ 0.29
Lime1-201ENSMUST00000048077 Slc4a10Q5DTL9 1118 aa16.85■□□□□ 0.29
Lime1-201ENSMUST00000048077 Jakmip1Q8BVL9 626 aa16.85■□□□□ 0.29
Lime1-201ENSMUST00000048077 Taf7Q9R1C0 341 aa16.85■□□□□ 0.29
Lime1-201ENSMUST00000048077 Map3k2Q61083 619 aa16.84■□□□□ 0.29
Lime1-201ENSMUST00000048077 TkfcQ8VC30 578 aa16.84■□□□□ 0.29
Lime1-201ENSMUST00000048077 MyclP10166 368 aa16.83■□□□□ 0.28
Lime1-201ENSMUST00000048077 Nkx2-3P97334 362 aa16.83■□□□□ 0.28
Lime1-201ENSMUST00000048077 Irf9Q61179 399 aa16.83■□□□□ 0.28
Lime1-201ENSMUST00000048077 Col15a1O35206 1367 aa16.83■□□□□ 0.28
Lime1-201ENSMUST00000048077 Kiaa0232Q80U59 1396 aaKnown RBP16.83■□□□□ 0.28
Lime1-201ENSMUST00000048077 Kcna6Q61923 529 aa16.82■□□□□ 0.28
Lime1-201ENSMUST00000048077 Ppfia1B2RXQ2 1266 aa16.82■□□□□ 0.28
Lime1-201ENSMUST00000048077 1700006A11RikB9EHI3 544 aa16.82■□□□□ 0.28
Lime1-201ENSMUST00000048077 Ddrgk1Q80WW9 315 aa16.82■□□□□ 0.28
Lime1-201ENSMUST00000048077 Tshz3Q8CGV9 1081 aa16.82■□□□□ 0.28
Lime1-201ENSMUST00000048077 Add2Q9QYB8 725 aa16.82■□□□□ 0.28
Lime1-201ENSMUST00000048077 Gm9992B2RWK3 458 aa16.81■□□□□ 0.28
Lime1-201ENSMUST00000048077 Unc93aQ710D3 458 aa16.81■□□□□ 0.28
Lime1-201ENSMUST00000048077 Nphp3Q7TNH6 1325 aa16.81■□□□□ 0.28
Lime1-201ENSMUST00000048077 Tgfb1i1Q62219 461 aa16.8■□□□□ 0.28
Lime1-201ENSMUST00000048077 SympkQ80X82 1284 aa16.8■□□□□ 0.28
Lime1-201ENSMUST00000048077 Brf1Q8CFK2 676 aa16.8■□□□□ 0.28
Lime1-201ENSMUST00000048077 Rrp9Q91WM3 475 aaKnown RBP16.8■□□□□ 0.28
Lime1-201ENSMUST00000048077 Taf5lQ91WQ5 589 aa16.8■□□□□ 0.28
Lime1-201ENSMUST00000048077 Slx4ipQ9D7Y9 413 aa16.8■□□□□ 0.28
Lime1-201ENSMUST00000048077 Tnks1bp1P58871 1720 aa16.8■□□□□ 0.28
Lime1-201ENSMUST00000048077 Dzip1Q8BMD2 852 aa16.8■□□□□ 0.28
Lime1-201ENSMUST00000048077 Cchcr1Q8K2I2 770 aa16.8■□□□□ 0.28
Lime1-201ENSMUST00000048077 Top1mtQ8R4U6 593 aa16.8■□□□□ 0.28
Lime1-201ENSMUST00000048077 Irx6Q9ER75 438 aa16.8■□□□□ 0.28
Lime1-201ENSMUST00000048077 Shank2Q80Z38 1476 aa16.8■□□□□ 0.28
Lime1-201ENSMUST00000048077 Ddx60E9PZQ1 1711 aa16.8■□□□□ 0.28
Lime1-201ENSMUST00000048077 PtmaP26350 111 aa16.79■□□□□ 0.28
Lime1-201ENSMUST00000048077 Kif4P33174 1231 aa16.79■□□□□ 0.28
Lime1-201ENSMUST00000048077 Grm8P47743 908 aa16.79■□□□□ 0.28
Lime1-201ENSMUST00000048077 Fam228bQ497Q6 232 aa16.79■□□□□ 0.28
Lime1-201ENSMUST00000048077 Rrp12Q6P5B0 1295 aaKnown RBP16.79■□□□□ 0.28
Lime1-201ENSMUST00000048077 Phlpp1Q8CHE4 1687 aa16.79■□□□□ 0.28
Lime1-201ENSMUST00000048077 Kcnn1Q9EQR3 537 aa16.79■□□□□ 0.28
Lime1-201ENSMUST00000048077 Mlh1Q9JK91 760 aa16.79■□□□□ 0.28
Lime1-201ENSMUST00000048077 Tns2Q8CGB6 1400 aa16.79■□□□□ 0.28
Lime1-201ENSMUST00000048077 Elmsan1E9Q2I4 1089 aaKnown RBP16.78■□□□□ 0.28
Lime1-201ENSMUST00000048077 PogkQ80TC5 607 aa16.78■□□□□ 0.28
Lime1-201ENSMUST00000048077 Gripap1Q8VD04 806 aa16.78■□□□□ 0.28
Lime1-201ENSMUST00000048077 Pdzd9Q9D9M4 266 aa16.78■□□□□ 0.28
Lime1-201ENSMUST00000048077 Ubr2Q6WKZ8 1755 aa16.78■□□□□ 0.28
Lime1-201ENSMUST00000048077 Gjb2Q00977 226 aa16.78■□□□□ 0.28
Lime1-201ENSMUST00000048077 Zbtb3Q91X45 518 aa16.78■□□□□ 0.28
Lime1-201ENSMUST00000048077 Mybbp1aQ7TPV4 1344 aaKnown RBP16.77■□□□□ 0.28
Lime1-201ENSMUST00000048077 Gm10471E9Q1C7 252 aa16.77■□□□□ 0.28
Lime1-201ENSMUST00000048077 Map3k13Q1HKZ5 959 aa16.77■□□□□ 0.28
Lime1-201ENSMUST00000048077 Paxip1Q6NZQ4 1056 aa16.77■□□□□ 0.28
Lime1-201ENSMUST00000048077 ThemisQ8BGW0 636 aa16.77■□□□□ 0.28
Lime1-201ENSMUST00000048077 Iqsec3Q3TES0 1195 aa16.77■□□□□ 0.27
Lime1-201ENSMUST00000048077 Ppm1mQ8BU27 406 aa16.77■□□□□ 0.27
Lime1-201ENSMUST00000048077 Kdm4aQ8BW72 1064 aa16.77■□□□□ 0.27
Lime1-201ENSMUST00000048077 Fez1Q8K0X8 392 aa16.77■□□□□ 0.27
Lime1-201ENSMUST00000048077 Farp2Q91VS8 1065 aa16.77■□□□□ 0.27
Lime1-201ENSMUST00000048077 Bicc1Q99MQ1 977 aaKnown RBP16.77■□□□□ 0.27
Lime1-201ENSMUST00000048077 Stk3Q9JI10 497 aa16.77■□□□□ 0.27
Lime1-201ENSMUST00000048077 Tjp1P39447 1745 aaKnown RBP16.76■□□□□ 0.27
Lime1-201ENSMUST00000048077 Tbc1d4Q8BYJ6 1307 aa16.76■□□□□ 0.27
Lime1-201ENSMUST00000048077 Ddx11Q6AXC6 880 aa16.76■□□□□ 0.27
Lime1-201ENSMUST00000048077 Slain2Q8CI08 581 aa16.76■□□□□ 0.27
Lime1-201ENSMUST00000048077 Sf3a1Q8K4Z5 791 aaKnown RBP16.76■□□□□ 0.27
Lime1-201ENSMUST00000048077 Gadd45bP22339 160 aa16.75■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms