RNA–Protein interactions for RNA: ENSMUST00000031971.12

Ssbp1-201, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

TSL 1 (best) BASIC

Gene Ssbp1, Length 1,063 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-201ENSMUST00000031971 Ppp1r3fQ9JIG4 799 aa10.74□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 KdrP35918 1367 aa10.74□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 PtpruB1AUH1 1446 aa10.74□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 Dsc3P55850 896 aa10.73□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 Adamts19P59509 1210 aa10.73□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 KhsrpQ3U0V1 748 aaKnown RBP10.73□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 Gpr150Q8BL07 427 aa10.73□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 Tmem132aQ922P8 1018 aa10.73□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 Mon2Q80TL7 1715 aa10.72□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 Gsto1O09131 240 aa10.72□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 Kcna6Q61923 529 aa10.72□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 Znf526Q8BI66 675 aa10.72□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 Gimap5Q8BWF2 308 aa10.72□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 NgefQ8CHT1 710 aa10.72□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 Tnrc6bQ8BKI2 1810 aaKnown RBP10.71□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 Farp2Q91VS8 1065 aa10.71□□□□□ -0.69
Ssbp1-201ENSMUST00000031971 Kif24Q6NWW5 1356 aa10.7□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Nek1P51954 1203 aa10.7□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Idi2Q8BFZ6 227 aa10.7□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 GopcQ8BH60 463 aa10.7□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 5730596B20RikQ8BQ08 205 aa10.7□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Cwc22Q8C5N3 908 aaKnown RBP10.7□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Tll2Q9WVM6 1012 aa10.7□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Pik3c2aQ61194 1686 aa10.69□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Wdr17E9Q271 1322 aa10.69□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Dmrtb1A2A9I7 359 aa10.69□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Slc10a4Q3UEZ8 437 aa10.69□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 GmprQ9DCZ1 345 aa10.69□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Exosc9Q9JHI7 438 aaKnown RBP10.69□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Adgrl1Q80TR1 1466 aa10.68□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 DccP70211 1447 aa10.68□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 PrxO55103 1391 aa10.68□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Dsg2O55111 1122 aa10.68□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Bmp1P98063 991 aa10.68□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Cypt2Q6P924 180 aa10.68□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Smim5Q8BT42 78 aa10.68□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Traf3ip2Q8N7N6 555 aa10.68□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Bcl2l12Q9D3J3 255 aa10.68□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 NinlQ6ZQ12 1394 aa10.67□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Capn5O08688 640 aaKnown RBP10.67□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Tom1O88746 492 aa10.67□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Nrxn1Q9CS84 1514 aa10.67□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Kif1aP33173 1695 aa10.66□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Sbno1Q689Z5 1390 aa10.66□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 FanciQ8K368 1330 aa10.66□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 P01644 108 aa10.66□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Igflr1Q3U4N7 345 aa10.66□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Qtrt2B8ZXI1 415 aa10.65□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 FanccP50652 591 aa10.65□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Pank3Q8R2W9 370 aa10.65□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Ap3b2Q9JME5 1082 aa10.65□□□□□ -0.7
Ssbp1-201ENSMUST00000031971 Fam184bQ0KK56 942 aa10.64□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Plekhg5Q66T02 1073 aa10.64□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Znf511Q6P0X2 227 aa10.64□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Trim47Q8C0E3 641 aa10.64□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 TbcelQ8C5W3 424 aa10.64□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Fut2Q9JL27 347 aa10.64□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Kat6aQ8BZ21 2003 aa10.63□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Abca15E9PWH4 1668 aa10.63□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Zfp142G5E869 1843 aa10.63□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Kif16bB1AVY7 1312 aa10.63□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Sox18P43680 377 aa10.63□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Kcnj4P52189 445 aa10.63□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Ybx3Q9JKB3 361 aaKnown RBP10.63□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Col16a1Q8BLX7 1580 aa10.62□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Trbv21A0A0A6YX06 97 aa10.62□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 MarsQ68FL6 902 aaKnown RBP10.62□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Sema6bO54951 886 aa10.61□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Ankrd33bQ3U0L2 486 aa10.61□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Cdan1Q8CC12 1239 aa10.61□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Cts7Q91ZF2 331 aa10.61□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Frmpd2A0A140LI67 1392 aa10.61□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Nhsl1Q8CAF4 1587 aa10.6□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Lrp6O88572 1613 aa10.6□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Chtf18Q8BIW9 969 aa10.6□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Wdr66E9Q743 1299 aa10.59□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Fyb1O35601 819 aa10.59□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 PtprnQ60673 979 aa10.59□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Dixdc1Q80Y83 711 aa10.59□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Acsbg1Q99PU5 721 aa10.59□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Cntnap1O54991 1385 aa10.59□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Atp10bB1AWN4 1474 aa10.59□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Atp7bQ64446 1462 aa10.59□□□□□ -0.71
Ssbp1-201ENSMUST00000031971 Marf1Q8BJ34 1730 aaKnown RBP10.58□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Tet3Q8BG87 1668 aa10.58□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 PaskQ8CEE6 1383 aa10.58□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Fgd1P52734 960 aa10.58□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Zscan10Q3URR7 782 aa10.58□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Agbl2Q8CDK2 862 aa10.58□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 PtprvP70289 1705 aa10.58□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Fam135bQ9DAI6 1403 aa10.58□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Znf335A2A5K6 1337 aa10.58□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Tmf1B9EKI3 1091 aa10.57□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Pik3r2O08908 722 aa10.57□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Dzip1Q8BMD2 852 aa10.57□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Spns2Q91VM4 549 aa10.57□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Slc5a4bQ91ZP4 660 aa10.57□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Nlgn1Q99K10 843 aa10.57□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Smg6P61406 1418 aaKnown RBP10.57□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Chd4Q6PDQ2 1915 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms