Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm25239-201ENSMUST00000174915 86 ntBASIC38,27■■■■□ 3,72
Sox18P43680 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35,69■■■■□ 3,3
Sox18P43680 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35,12■■■■□ 3,21
Sox18P43680 Gm24109-201ENSMUST00000175489 103 ntBASIC33,49■■■□□ 2,95
Sox18P43680 Gm15042-201ENSMUST00000120212 883 ntBASIC32,86■■■□□ 2,85
Sox18P43680 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32,41■■■□□ 2,78
Sox18P43680 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32,37■■■□□ 2,77
Sox18P43680 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32,13■■■□□ 2,73
Sox18P43680 Gm15045-201ENSMUST00000117359 883 ntBASIC32■■■□□ 2,71
Sox18P43680 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31,94■■■□□ 2,7
Sox18P43680 Gm23366-201ENSMUST00000175022 89 ntBASIC31,91■■■□□ 2,7
Sox18P43680 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31,43■■■□□ 2,62
Sox18P43680 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31,2■■■□□ 2,59
Sox18P43680 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31,16■■■□□ 2,58
Sox18P43680 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31,07■■■□□ 2,56
Sox18P43680 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31,05■■■□□ 2,56
Sox18P43680 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30,74■■■□□ 2,51
Sox18P43680 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30,71■■■□□ 2,51
Sox18P43680 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30,54■■■□□ 2,48
Sox18P43680 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30,5■■■□□ 2,47
Sox18P43680 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30,47■■■□□ 2,47
Sox18P43680 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Sox18P43680 Gm25238-201ENSMUST00000174914 89 ntBASIC30,39■■■□□ 2,46
Sox18P43680 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29,98■■■□□ 2,39
Sox18P43680 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29,83■■■□□ 2,37
Sox18P43680 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29,75■■■□□ 2,35
Sox18P43680 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29,7■■■□□ 2,35
Sox18P43680 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29,65■■■□□ 2,34
Sox18P43680 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29,48■■■□□ 2,31
Sox18P43680 Gm25262-201ENSMUST00000174934 133 ntBASIC29,46■■■□□ 2,31
Sox18P43680 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29,39■■■□□ 2,3
Sox18P43680 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29,26■■■□□ 2,27
Sox18P43680 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29,19■■■□□ 2,26
Sox18P43680 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29,14■■■□□ 2,26
Sox18P43680 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29,12■■■□□ 2,25
Sox18P43680 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29,06■■■□□ 2,24
Sox18P43680 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29,01■■■□□ 2,23
Sox18P43680 Gm26115-201ENSMUST00000175605 87 ntBASIC28,99■■■□□ 2,23
Sox18P43680 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28,98■■■□□ 2,23
Sox18P43680 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28,95■■■□□ 2,22
Sox18P43680 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28,88■■■□□ 2,21
Sox18P43680 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28,85■■■□□ 2,21
Sox18P43680 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28,8■■■□□ 2,2
Sox18P43680 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28,76■■■□□ 2,19
Sox18P43680 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28,75■■■□□ 2,19
Sox18P43680 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28,74■■■□□ 2,19
Sox18P43680 Gm8109-201ENSMUST00000194076 746 ntBASIC28,72■■■□□ 2,19
Sox18P43680 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28,7■■■□□ 2,18
Sox18P43680 Gm27325-201ENSMUST00000175467 74 ntBASIC28,68■■■□□ 2,18
Sox18P43680 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28,63■■■□□ 2,17
Sox18P43680 Rab21-202ENSMUST00000218831 843 ntBASIC28,58■■■□□ 2,17
Sox18P43680 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28,58■■■□□ 2,17
Sox18P43680 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28,52■■■□□ 2,16
Sox18P43680 Psd-208ENSMUST00000224556 2034 ntBASIC28,47■■■□□ 2,15
Sox18P43680 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28,44■■■□□ 2,14
Sox18P43680 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28,33■■■□□ 2,13
Sox18P43680 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28,16■■■□□ 2,1
Sox18P43680 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28,16■■■□□ 2,1
Sox18P43680 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28,16■■■□□ 2,1
Sox18P43680 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28,14■■■□□ 2,1
Sox18P43680 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28,14■■■□□ 2,1
Sox18P43680 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28,13■■■□□ 2,09
Sox18P43680 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28,1■■■□□ 2,09
Sox18P43680 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28,08■■■□□ 2,09
Sox18P43680 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27,93■■■□□ 2,06
Sox18P43680 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27,89■■■□□ 2,06
Sox18P43680 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27,85■■■□□ 2,05
Sox18P43680 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27,82■■■□□ 2,04
Sox18P43680 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27,82■■■□□ 2,04
Sox18P43680 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27,79■■■□□ 2,04
Sox18P43680 Gm24804-201ENSMUST00000174982 85 ntBASIC27,73■■■□□ 2,03
Sox18P43680 Gm17082-201ENSMUST00000166043 1091 ntBASIC27,72■■■□□ 2,03
Sox18P43680 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27,71■■■□□ 2,03
Sox18P43680 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27,71■■■□□ 2,03
Sox18P43680 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27,65■■■□□ 2,02
Sox18P43680 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27,63■■■□□ 2,01
Sox18P43680 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27,58■■■□□ 2,01
Sox18P43680 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27,55■■■□□ 2
Sox18P43680 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27,51■■■□□ 2
Sox18P43680 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27,49■■□□□ 1,99
Sox18P43680 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27,42■■□□□ 1,98
Sox18P43680 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27,42■■□□□ 1,98
Sox18P43680 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27,39■■□□□ 1,98
Sox18P43680 Gm27322-201ENSMUST00000184007 104 ntBASIC27,38■■□□□ 1,97
Sox18P43680 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27,38■■□□□ 1,97
Sox18P43680 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27,33■■□□□ 1,97
Sox18P43680 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27,3■■□□□ 1,96
Sox18P43680 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27,27■■□□□ 1,96
Sox18P43680 Zfp131-205ENSMUST00000223812 663 ntBASIC27,27■■□□□ 1,96
Sox18P43680 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27,25■■□□□ 1,95
Sox18P43680 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27,25■■□□□ 1,95
Sox18P43680 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27,25■■□□□ 1,95
Sox18P43680 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27,25■■□□□ 1,95
Sox18P43680 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27,2■■□□□ 1,94
Sox18P43680 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27,19■■□□□ 1,94
Sox18P43680 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27,19■■□□□ 1,94
Sox18P43680 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27,19■■□□□ 1,94
Sox18P43680 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27,17■■□□□ 1,94
Sox18P43680 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27,16■■□□□ 1,94
Sox18P43680 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27,16■■□□□ 1,94
Retrieved 100 of 76,532 protein–RNA pairs in 17,2 ms